RNA–Protein interactions for RNA: ENST00000313708.10

EBF1-201, Transcript of early B cell factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EBF1, Length 5,250 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-201ENST00000313708 Q0VFX4 171 aa9.62□□□□□ -0.87
EBF1-201ENST00000313708 TMEM219Q86XT9 240 aa9.62□□□□□ -0.87
EBF1-201ENST00000313708 HCFC1P51610 2035 aa9.62□□□□□ -0.87
EBF1-201ENST00000313708 TNCP24821 2201 aa9.62□□□□□ -0.87
EBF1-201ENST00000313708 CRIP1P50238 77 aa9.62□□□□□ -0.87
EBF1-201ENST00000313708 C1orf229Q6ZS94 237 aaPredicted RBP9.62□□□□□ -0.87
EBF1-201ENST00000313708 CPAMD8Q8IZJ3 1885 aa9.61□□□□□ -0.87
EBF1-201ENST00000313708 M0R1W7 72 aa9.61□□□□□ -0.87
EBF1-201ENST00000313708 C19orf54Q5BKX5 351 aa9.61□□□□□ -0.87
EBF1-201ENST00000313708 ARFGEF3Q5TH69 2177 aa9.61□□□□□ -0.87
EBF1-201ENST00000313708 NBR2O15453 112 aa9.61□□□□□ -0.87
EBF1-201ENST00000313708 ZNF491Q8N8L2 437 aa9.61□□□□□ -0.87
EBF1-201ENST00000313708 TOMM6Q96B49 74 aa9.61□□□□□ -0.87
EBF1-201ENST00000313708 SS18L1O75177 396 aaPredicted RBP9.61□□□□□ -0.87
EBF1-201ENST00000313708 CRIP2P52943 208 aaPredicted RBP9.61□□□□□ -0.87
EBF1-201ENST00000313708 LINC00643Q86TS7 51 aa9.61□□□□□ -0.87
EBF1-201ENST00000313708 DYNAPQ8N1N2 210 aa9.61□□□□□ -0.87
EBF1-201ENST00000313708 TMEM243Q9BU79 118 aa9.61□□□□□ -0.87
EBF1-201ENST00000313708 SPRR3Q9UBC9 169 aa9.6□□□□□ -0.87
EBF1-201ENST00000313708 NTN3O00634 580 aaPredicted RBP9.6□□□□□ -0.87
EBF1-201ENST00000313708 GAS8-AS1O95177 125 aa9.6□□□□□ -0.87
EBF1-201ENST00000313708 IGHV1-46P01743 117 aa9.6□□□□□ -0.87
EBF1-201ENST00000313708 ATP5G1P05496 136 aa9.6□□□□□ -0.87
EBF1-201ENST00000313708 IGHV1-3A0A0C4DH29 117 aa9.6□□□□□ -0.87
EBF1-201ENST00000313708 NDUFA12Q9UI09 145 aa9.6□□□□□ -0.87
EBF1-201ENST00000313708 FREM1Q5H8C1 2179 aa9.6□□□□□ -0.87
EBF1-201ENST00000313708 TRAV17A0A0B4J275 112 aa9.6□□□□□ -0.87
EBF1-201ENST00000313708 BAALC-AS2P0C853 105 aa9.6□□□□□ -0.87
EBF1-201ENST00000313708 GFRALQ6UXV0 394 aa9.6□□□□□ -0.87
EBF1-201ENST00000313708 C1orf162Q8NEQ5 155 aaPredicted RBP9.6□□□□□ -0.87
EBF1-201ENST00000313708 A0A0J9YY99 117 aa9.59□□□□□ -0.87
EBF1-201ENST00000313708 TRBV6-1A0A0K0K1D8 114 aa9.59□□□□□ -0.87
EBF1-201ENST00000313708 C16orf97H3BN30 126 aa9.59□□□□□ -0.87
EBF1-201ENST00000313708 LEPROTO15243 131 aa9.59□□□□□ -0.87
EBF1-201ENST00000313708 RBMY1BA6NDE4 496 aaKnown RBP9.59□□□□□ -0.87
EBF1-201ENST00000313708 RBMY1EA6NEQ0 496 aaKnown RBP9.59□□□□□ -0.87
EBF1-201ENST00000313708 RBMY1DP0C7P1 496 aaKnown RBP9.59□□□□□ -0.87
EBF1-201ENST00000313708 RBMY1A1P0DJD3 496 aaKnown RBP9.59□□□□□ -0.87
EBF1-201ENST00000313708 RBMY1CP0DJD4 496 aa9.59□□□□□ -0.87
EBF1-201ENST00000313708 NDPQ00604 133 aa9.59□□□□□ -0.87
EBF1-201ENST00000313708 RBMY1FQ15415 496 aaKnown RBP9.59□□□□□ -0.87
EBF1-201ENST00000313708 CRYGBP07316 175 aa9.59□□□□□ -0.87
EBF1-201ENST00000313708 INS-IGF2F8WCM5 200 aa9.58□□□□□ -0.88
EBF1-201ENST00000313708 DKK1O94907 266 aa9.58□□□□□ -0.88
EBF1-201ENST00000313708 IGLV2-11P01706 119 aa9.58□□□□□ -0.88
EBF1-201ENST00000313708 ZNF876PQ49A33 203 aa9.58□□□□□ -0.88
EBF1-201ENST00000313708 SAP25Q8TEE9 199 aa9.58□□□□□ -0.88
EBF1-201ENST00000313708 RNF152Q8N8N0 203 aa9.58□□□□□ -0.88
EBF1-201ENST00000313708 UBE2E1P51965 193 aa9.58□□□□□ -0.88
EBF1-201ENST00000313708 UBE2D3P61077 147 aa9.58□□□□□ -0.88
EBF1-201ENST00000313708 UBE2D2P62837 147 aa9.58□□□□□ -0.88
EBF1-201ENST00000313708 Q71RC1 249 aaPredicted RBP9.58□□□□□ -0.88
EBF1-201ENST00000313708 C9orf106Q8NAJ2 232 aa9.58□□□□□ -0.88
EBF1-201ENST00000313708 ZNF784Q8NCA9 323 aaPredicted RBP9.58□□□□□ -0.88
EBF1-201ENST00000313708 C11orf68Q9H3H3 251 aaKnown RBP9.58□□□□□ -0.88
EBF1-201ENST00000313708 TRAV25A0A0B4J276 109 aa9.58□□□□□ -0.88
EBF1-201ENST00000313708 SDHAF1A6NFY7 115 aa9.58□□□□□ -0.88
EBF1-201ENST00000313708 PATE3B3GLJ2 98 aa9.58□□□□□ -0.88
EBF1-201ENST00000313708 IGHV1-8P0DP01 117 aa9.58□□□□□ -0.88
EBF1-201ENST00000313708 ZNF80P51504 273 aaPredicted RBP9.58□□□□□ -0.88
EBF1-201ENST00000313708 RNF185Q96GF1 192 aa9.58□□□□□ -0.88
EBF1-201ENST00000313708 C10orf105Q8TEF2 133 aa9.57□□□□□ -0.88
EBF1-201ENST00000313708 IGHV3-33P01772 117 aa9.57□□□□□ -0.88
EBF1-201ENST00000313708 FHL3Q13643 280 aa9.57□□□□□ -0.88
EBF1-201ENST00000313708 LINC01548A6NM66 108 aa9.57□□□□□ -0.88
EBF1-201ENST00000313708 NEXN-AS1Q8NBZ9 246 aa9.57□□□□□ -0.88
EBF1-201ENST00000313708 ZMAT4Q9H898 229 aa9.57□□□□□ -0.88
EBF1-201ENST00000313708 LINC01619G3V211 115 aa9.56□□□□□ -0.88
EBF1-201ENST00000313708 RPL39P62891 51 aaKnown RBP9.56□□□□□ -0.88
EBF1-201ENST00000313708 RHOHQ15669 191 aa9.56□□□□□ -0.88
EBF1-201ENST00000313708 RITA1Q96K30 269 aa9.56□□□□□ -0.88
EBF1-201ENST00000313708 C2orf16Q68DN1 1984 aa9.56□□□□□ -0.88
EBF1-201ENST00000313708 TRIAP1O43715 76 aa9.56□□□□□ -0.88
EBF1-201ENST00000313708 ATP1A1-AS1Q5TC04 95 aa9.56□□□□□ -0.88
EBF1-201ENST00000313708 SLC25A29Q8N8R3 303 aa9.56□□□□□ -0.88
EBF1-201ENST00000313708 BRK1Q8WUW1 75 aa9.56□□□□□ -0.88
EBF1-201ENST00000313708 DEFB109BQ30KR1 87 aa9.56□□□□□ -0.88
EBF1-201ENST00000313708 WNK2Q9Y3S1 2297 aa9.56□□□□□ -0.88
EBF1-201ENST00000313708 IGKV1-17P01599 117 aa9.56□□□□□ -0.88
EBF1-201ENST00000313708 IGHV3-30P01768 117 aa9.56□□□□□ -0.88
EBF1-201ENST00000313708 CRPP02741 224 aa9.56□□□□□ -0.88
EBF1-201ENST00000313708 IGHV3-30-5P0DP03 117 aa9.56□□□□□ -0.88
EBF1-201ENST00000313708 COX7CP15954 63 aa9.56□□□□□ -0.88
EBF1-201ENST00000313708 AGRNO00468 2067 aa9.56□□□□□ -0.88
EBF1-201ENST00000313708 RBM3P98179 157 aaKnown RBP9.55□□□□□ -0.88
EBF1-201ENST00000313708 TEX36Q5VZQ5 186 aa9.55□□□□□ -0.88
EBF1-201ENST00000313708 LY6G5BQ8NDX9 201 aa9.55□□□□□ -0.88
EBF1-201ENST00000313708 TOMM7Q9P0U1 55 aa9.55□□□□□ -0.88
EBF1-201ENST00000313708 TNRC6BQ9UPQ9 1833 aaKnown RBP9.55□□□□□ -0.88
EBF1-201ENST00000313708 IGKV3OR2-268A0A0C4DH90 116 aa9.55□□□□□ -0.88
EBF1-201ENST00000313708 A0A0U1RQV1 116 aa9.55□□□□□ -0.88
EBF1-201ENST00000313708 P0DMU3 169 aa9.55□□□□□ -0.88
EBF1-201ENST00000313708 FAM231AP0DMU4 169 aa9.55□□□□□ -0.88
EBF1-201ENST00000313708 FAM231CP0DMU5 169 aa9.55□□□□□ -0.88
EBF1-201ENST00000313708 DPM3Q9P2X0 92 aa9.55□□□□□ -0.88
EBF1-201ENST00000313708 CENPFP49454 3210 aa9.55□□□□□ -0.88
EBF1-201ENST00000313708 PLXNB1O43157 2135 aa9.55□□□□□ -0.88
EBF1-201ENST00000313708 TINCRA0A1B0GVN0 87 aa9.55□□□□□ -0.88
EBF1-201ENST00000313708 S100A7L2Q5SY68 101 aa9.55□□□□□ -0.88
EBF1-201ENST00000313708 Q6ZS46 218 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms