RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 TRAV21A0A0B4J279 112 aa10.05□□□□□ -0.8
PPP1CA-201ENST00000312989 TAAR5O14804 337 aa10.05□□□□□ -0.8
PPP1CA-201ENST00000312989 CRYBA4P53673 196 aa10.05□□□□□ -0.8
PPP1CA-201ENST00000312989 ZNF345Q14585 488 aa10.05□□□□□ -0.8
PPP1CA-201ENST00000312989 CYB561D1Q8N8Q1 229 aa10.05□□□□□ -0.8
PPP1CA-201ENST00000312989 TMEM75Q8N9X5 138 aa10.05□□□□□ -0.8
PPP1CA-201ENST00000312989 ZNF479Q96JC4 524 aa10.05□□□□□ -0.8
PPP1CA-201ENST00000312989 MRPS16Q9Y3D3 137 aaKnown RBP10.05□□□□□ -0.8
PPP1CA-201ENST00000312989 HSPG2P98160 4391 aa10.04□□□□□ -0.8
PPP1CA-201ENST00000312989 SFTA3P0C7M3 94 aa10.04□□□□□ -0.8
PPP1CA-201ENST00000312989 FHITP49789 147 aa10.04□□□□□ -0.8
PPP1CA-201ENST00000312989 FGF8P55075 233 aaPredicted RBP10.04□□□□□ -0.8
PPP1CA-201ENST00000312989 FLI1Q01543 452 aaPredicted RBP10.04□□□□□ -0.8
PPP1CA-201ENST00000312989 FAM159AQ6UWV7 190 aa10.04□□□□□ -0.8
PPP1CA-201ENST00000312989 IQCF2Q8IXL9 164 aa10.04□□□□□ -0.8
PPP1CA-201ENST00000312989 NAGKQ9UJ70 344 aa10.04□□□□□ -0.8
PPP1CA-201ENST00000312989 MUC4Q99102 2169 aa10.04□□□□□ -0.8
PPP1CA-201ENST00000312989 APOBP04114 4563 aaKnown RBP10.04□□□□□ -0.8
PPP1CA-201ENST00000312989 FAM74A7A6NL05 159 aa10.03□□□□□ -0.8
PPP1CA-201ENST00000312989 HMSDA8MTL9 139 aa10.03□□□□□ -0.8
PPP1CA-201ENST00000312989 C1orf134Q5TEV5 83 aa10.03□□□□□ -0.8
PPP1CA-201ENST00000312989 SPXQ9BT56 116 aa10.03□□□□□ -0.8
PPP1CA-201ENST00000312989 Q9H8V8 135 aa10.03□□□□□ -0.8
PPP1CA-201ENST00000312989 PRO0255Q9UI72 69 aa10.03□□□□□ -0.8
PPP1CA-201ENST00000312989 GCGP01275 180 aa10.02□□□□□ -0.8
PPP1CA-201ENST00000312989 TRAV34A0A0B4J273 112 aa10.01□□□□□ -0.81
PPP1CA-201ENST00000312989 IGKV3D-20A0A0C4DH25 116 aa10.01□□□□□ -0.81
PPP1CA-201ENST00000312989 MAP1LC3B2A6NCE7 125 aa10.01□□□□□ -0.81
PPP1CA-201ENST00000312989 PFN1P07737 140 aaKnown RBP10.01□□□□□ -0.81
PPP1CA-201ENST00000312989 UBE2G2P60604 165 aa10.01□□□□□ -0.81
PPP1CA-201ENST00000312989 TNP2Q05952 138 aa10.01□□□□□ -0.81
PPP1CA-201ENST00000312989 AKR1C8PQ5T2L2 129 aa10.01□□□□□ -0.81
PPP1CA-201ENST00000312989 DPPA3Q6W0C5 159 aa10.01□□□□□ -0.81
PPP1CA-201ENST00000312989 PRNTQ86SH4 94 aa10.01□□□□□ -0.81
PPP1CA-201ENST00000312989 ZNF575Q86XF7 245 aa10.01□□□□□ -0.81
PPP1CA-201ENST00000312989 C9orf85Q96MD7 179 aa10.01□□□□□ -0.81
PPP1CA-201ENST00000312989 MAP1LC3BQ9GZQ8 125 aa10.01□□□□□ -0.81
PPP1CA-201ENST00000312989 HHLA3Q9XRX5 114 aa10.01□□□□□ -0.81
PPP1CA-201ENST00000312989 M0R2P5 195 aa10.01□□□□□ -0.81
PPP1CA-201ENST00000312989 PEX7O00628 323 aa10.01□□□□□ -0.81
PPP1CA-201ENST00000312989 PAX4O43316 350 aa10.01□□□□□ -0.81
PPP1CA-201ENST00000312989 RNASE3P12724 160 aaKnown RBP10.01□□□□□ -0.81
PPP1CA-201ENST00000312989 COX8CQ7Z4L0 72 aa10.01□□□□□ -0.81
PPP1CA-201ENST00000312989 Q86TA4 180 aa10.01□□□□□ -0.81
PPP1CA-201ENST00000312989 C6orf223Q8N319 242 aa10.01□□□□□ -0.81
PPP1CA-201ENST00000312989 SDF2L1Q9HCN8 221 aa10.01□□□□□ -0.81
PPP1CA-201ENST00000312989 ARL2-SNX15V9GYD0 113 aa10.01□□□□□ -0.81
PPP1CA-201ENST00000312989 TRAV4A0A0B4J268 109 aa10□□□□□ -0.81
PPP1CA-201ENST00000312989 BCL2L11O43521 198 aa10□□□□□ -0.81
PPP1CA-201ENST00000312989 SEC11BP0C7V7 166 aa10□□□□□ -0.81
PPP1CA-201ENST00000312989 CRIP1P50238 77 aa10□□□□□ -0.81
PPP1CA-201ENST00000312989 KCNS1Q96KK3 526 aa10□□□□□ -0.81
PPP1CA-201ENST00000312989 NDFIP1Q9BT67 221 aa10□□□□□ -0.81
PPP1CA-201ENST00000312989 ICOSQ9Y6W8 199 aa10□□□□□ -0.81
PPP1CA-201ENST00000312989 ABCA13Q86UQ4 5058 aa9.99□□□□□ -0.81
PPP1CA-201ENST00000312989 FBLL1A6NHQ2 334 aaKnown RBP9.99□□□□□ -0.81
PPP1CA-201ENST00000312989 K7EQD1 137 aa9.99□□□□□ -0.81
PPP1CA-201ENST00000312989 K7EQM0 130 aa9.99□□□□□ -0.81
PPP1CA-201ENST00000312989 SLAQ13239 276 aa9.99□□□□□ -0.81
PPP1CA-201ENST00000312989 SMUG1Q53HV7 270 aa9.99□□□□□ -0.81
PPP1CA-201ENST00000312989 MBD3L1Q8WWY6 194 aa9.99□□□□□ -0.81
PPP1CA-201ENST00000312989 SAPCD1Q5SSQ6 148 aa9.98□□□□□ -0.81
PPP1CA-201ENST00000312989 LYPD5Q6UWN5 251 aa9.98□□□□□ -0.81
PPP1CA-201ENST00000312989 HIST1H2BAQ96A08 127 aa9.98□□□□□ -0.81
PPP1CA-201ENST00000312989 PTH2Q96A98 100 aa9.98□□□□□ -0.81
PPP1CA-201ENST00000312989 A0A0D9SG52 128 aa9.97□□□□□ -0.81
PPP1CA-201ENST00000312989 TRBV6-1A0A0K0K1D8 114 aa9.97□□□□□ -0.81
PPP1CA-201ENST00000312989 LOC100131303A0A0U1RQF7 123 aa9.97□□□□□ -0.81
PPP1CA-201ENST00000312989 A0A1W2PPQ1 181 aa9.97□□□□□ -0.81
PPP1CA-201ENST00000312989 PGPEP1LA6NFU8 196 aa9.97□□□□□ -0.81
PPP1CA-201ENST00000312989 GATA1P15976 413 aaPredicted RBP9.97□□□□□ -0.81
PPP1CA-201ENST00000312989 SOHLH1Q5JUK2 328 aa9.97□□□□□ -0.81
PPP1CA-201ENST00000312989 Q6ZRN7 208 aaPredicted RBP9.97□□□□□ -0.81
PPP1CA-201ENST00000312989 ZC2HC1AQ96GY0 325 aa9.97□□□□□ -0.81
PPP1CA-201ENST00000312989 TRGV4A0A0C4DH28 118 aa9.96□□□□□ -0.82
PPP1CA-201ENST00000312989 RS1O15537 224 aa9.96□□□□□ -0.82
PPP1CA-201ENST00000312989 MRPL23Q16540 153 aaKnown RBP9.96□□□□□ -0.82
PPP1CA-201ENST00000312989 CFAP126Q5VTH2 177 aa9.96□□□□□ -0.82
PPP1CA-201ENST00000312989 OR4C5Q8NGB2 326 aa9.96□□□□□ -0.82
PPP1CA-201ENST00000312989 NKX6-2Q9C056 277 aaPredicted RBP9.96□□□□□ -0.82
PPP1CA-201ENST00000312989 NXPH4O95158 308 aa9.95□□□□□ -0.82
PPP1CA-201ENST00000312989 IFNA7P01567 189 aa9.95□□□□□ -0.82
PPP1CA-201ENST00000312989 GYPEP15421 78 aa9.95□□□□□ -0.82
PPP1CA-201ENST00000312989 TTC32Q5I0X7 151 aa9.95□□□□□ -0.82
PPP1CA-201ENST00000312989 ZNF506Q5JVG8 444 aa9.95□□□□□ -0.82
PPP1CA-201ENST00000312989 STOML3Q8TAV4 291 aa9.95□□□□□ -0.82
PPP1CA-201ENST00000312989 ZNF471Q9BX82 626 aaPredicted RBP9.95□□□□□ -0.82
PPP1CA-201ENST00000312989 UMAD1C9J7I0 102 aa9.94□□□□□ -0.82
PPP1CA-201ENST00000312989 C9JCJ5 164 aa9.94□□□□□ -0.82
PPP1CA-201ENST00000312989 LTAP01374 205 aa9.94□□□□□ -0.82
PPP1CA-201ENST00000312989 ZNF876PQ49A33 203 aa9.94□□□□□ -0.82
PPP1CA-201ENST00000312989 ZFP69Q49AA0 526 aa9.94□□□□□ -0.82
PPP1CA-201ENST00000312989 DNLZQ5SXM8 178 aa9.94□□□□□ -0.82
PPP1CA-201ENST00000312989 Q6ZNX1 250 aa9.94□□□□□ -0.82
PPP1CA-201ENST00000312989 TMUB2Q71RG4 321 aa9.94□□□□□ -0.82
PPP1CA-201ENST00000312989 NEGR1Q7Z3B1 354 aa9.94□□□□□ -0.82
PPP1CA-201ENST00000312989 FAM213BQ8TBF2 198 aa9.94□□□□□ -0.82
PPP1CA-201ENST00000312989 TCEAL7Q9BRU2 100 aa9.94□□□□□ -0.82
PPP1CA-201ENST00000312989 KANTRA0A1W2PQU2 76 aa9.93□□□□□ -0.82
PPP1CA-201ENST00000312989 PAGE4O60829 102 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms