RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 FAM159AQ6UWV7 190 aa8.42□□□□□ -1.06
SCFD1-201ENST00000311943 POM121L12Q8N7R1 296 aa8.42□□□□□ -1.06
SCFD1-201ENST00000311943 MUC4Q99102 2169 aa8.42□□□□□ -1.06
SCFD1-201ENST00000311943 IGHV3-16A0A0C4DH30 117 aa8.42□□□□□ -1.06
SCFD1-201ENST00000311943 M0R036 132 aa8.42□□□□□ -1.06
SCFD1-201ENST00000311943 SPINK4O60575 86 aa8.42□□□□□ -1.06
SCFD1-201ENST00000311943 NUDT3O95989 172 aa8.42□□□□□ -1.06
SCFD1-201ENST00000311943 ATP5G1P05496 136 aa8.42□□□□□ -1.06
SCFD1-201ENST00000311943 DPPA3Q6W0C5 159 aa8.42□□□□□ -1.06
SCFD1-201ENST00000311943 LINC00467Q9BRT7 94 aa8.42□□□□□ -1.06
SCFD1-201ENST00000311943 NDUFAF3Q9BU61 184 aa8.42□□□□□ -1.06
SCFD1-201ENST00000311943 LENEPQ9Y5L5 61 aa8.42□□□□□ -1.06
SCFD1-201ENST00000311943 TRBV7-9A0A0J9YWB2 115 aa8.41□□□□□ -1.06
SCFD1-201ENST00000311943 TEX46H3BTG2 121 aa8.41□□□□□ -1.06
SCFD1-201ENST00000311943 LGALS9CQ6DKI2 356 aa8.41□□□□□ -1.06
SCFD1-201ENST00000311943 ZNF479Q96JC4 524 aa8.41□□□□□ -1.06
SCFD1-201ENST00000311943 IGLV2-18A0A075B6J9 118 aa8.41□□□□□ -1.06
SCFD1-201ENST00000311943 TRGV2A0A075B6R0 118 aa8.41□□□□□ -1.06
SCFD1-201ENST00000311943 TMSB15BA0A087X1C1 80 aa8.41□□□□□ -1.06
SCFD1-201ENST00000311943 TRAV21A0A0B4J279 112 aa8.41□□□□□ -1.06
SCFD1-201ENST00000311943 M0R2N4 97 aa8.41□□□□□ -1.06
SCFD1-201ENST00000311943 ARL6IP6Q8N6S5 226 aa8.41□□□□□ -1.06
SCFD1-201ENST00000311943 VSIG2Q96IQ7 327 aa8.41□□□□□ -1.06
SCFD1-201ENST00000311943 GRIFINA4D1Z8 144 aa8.4□□□□□ -1.06
SCFD1-201ENST00000311943 PGPEP1LA6NFU8 196 aa8.4□□□□□ -1.06
SCFD1-201ENST00000311943 PFN1P07737 140 aaKnown RBP8.4□□□□□ -1.06
SCFD1-201ENST00000311943 EIF5AP63241 154 aaKnown RBP8.4□□□□□ -1.06
SCFD1-201ENST00000311943 RPL19P84098 196 aaKnown RBP8.4□□□□□ -1.06
SCFD1-201ENST00000311943 A0A096LPF7 62 aa8.39□□□□□ -1.07
SCFD1-201ENST00000311943 C9JCJ5 164 aa8.39□□□□□ -1.07
SCFD1-201ENST00000311943 K7EQM0 130 aa8.39□□□□□ -1.07
SCFD1-201ENST00000311943 RNASE3P12724 160 aaKnown RBP8.39□□□□□ -1.07
SCFD1-201ENST00000311943 TDRG1Q3Y452 100 aa8.39□□□□□ -1.07
SCFD1-201ENST00000311943 SMUG1Q53HV7 270 aa8.39□□□□□ -1.07
SCFD1-201ENST00000311943 IBA57Q5T440 356 aaKnown RBP8.39□□□□□ -1.07
SCFD1-201ENST00000311943 ZNF680Q8NEM1 530 aa8.39□□□□□ -1.07
SCFD1-201ENST00000311943 NDFIP1Q9BT67 221 aa8.39□□□□□ -1.07
SCFD1-201ENST00000311943 DNAH10Q8IVF4 4471 aa8.39□□□□□ -1.07
SCFD1-201ENST00000311943 IGHV3-73A0A0B4J1V6 119 aa8.39□□□□□ -1.07
SCFD1-201ENST00000311943 TEX48A0A1B0GUV7 120 aa8.39□□□□□ -1.07
SCFD1-201ENST00000311943 RAB19A4D1S5 217 aa8.39□□□□□ -1.07
SCFD1-201ENST00000311943 SH2D1AO60880 128 aa8.39□□□□□ -1.07
SCFD1-201ENST00000311943 ZNF415Q09FC8 603 aa8.39□□□□□ -1.07
SCFD1-201ENST00000311943 HIST1H2BAQ96A08 127 aa8.39□□□□□ -1.07
SCFD1-201ENST00000311943 JPT2Q9H910 190 aa8.39□□□□□ -1.07
SCFD1-201ENST00000311943 LOC100131303A0A0U1RQF7 123 aa8.38□□□□□ -1.07
SCFD1-201ENST00000311943 SERTM2A0A1B0GWG4 89 aa8.38□□□□□ -1.07
SCFD1-201ENST00000311943 AKR1C3P42330 323 aa8.38□□□□□ -1.07
SCFD1-201ENST00000311943 LTAP01374 205 aa8.37□□□□□ -1.07
SCFD1-201ENST00000311943 UBE2G1P62253 170 aa8.37□□□□□ -1.07
SCFD1-201ENST00000311943 FHL2Q14192 279 aa8.37□□□□□ -1.07
SCFD1-201ENST00000311943 Q9UF83 564 aa8.37□□□□□ -1.07
SCFD1-201ENST00000311943 TRBV20OR9-2A0A075B6H5 130 aa8.37□□□□□ -1.07
SCFD1-201ENST00000311943 MUC21A0A0G2JKD1 596 aa8.37□□□□□ -1.07
SCFD1-201ENST00000311943 MUC21A0A140T8X8 626 aa8.37□□□□□ -1.07
SCFD1-201ENST00000311943 ORM1P02763 201 aa8.37□□□□□ -1.07
SCFD1-201ENST00000311943 SAPCD1Q5SSQ6 148 aa8.37□□□□□ -1.07
SCFD1-201ENST00000311943 PRR27Q6MZM9 219 aa8.37□□□□□ -1.07
SCFD1-201ENST00000311943 SDF2L1Q9HCN8 221 aa8.37□□□□□ -1.07
SCFD1-201ENST00000311943 TRAV1-1A0A0B4J248 108 aa8.36□□□□□ -1.07
SCFD1-201ENST00000311943 RPL35P42766 123 aaKnown RBP8.36□□□□□ -1.07
SCFD1-201ENST00000311943 SSTP61278 116 aa8.36□□□□□ -1.07
SCFD1-201ENST00000311943 NKX6-2Q9C056 277 aaPredicted RBP8.36□□□□□ -1.07
SCFD1-201ENST00000311943 LINC00588Q9Y4M8 146 aa8.36□□□□□ -1.07
SCFD1-201ENST00000311943 TRGV11A0A075B6L2 103 aa8.36□□□□□ -1.07
SCFD1-201ENST00000311943 IGLV2-8P01709 118 aa8.36□□□□□ -1.07
SCFD1-201ENST00000311943 RAB5CP51148 216 aa8.36□□□□□ -1.07
SCFD1-201ENST00000311943 RASL10AQ92737 203 aa8.36□□□□□ -1.07
SCFD1-201ENST00000311943 FMC1Q96HJ9 113 aa8.36□□□□□ -1.07
SCFD1-201ENST00000311943 MLST8Q9BVC4 326 aa8.36□□□□□ -1.07
SCFD1-201ENST00000311943 SAMD10Q9BYL1 202 aa8.36□□□□□ -1.07
SCFD1-201ENST00000311943 FABP5P3A8MUU1 101 aa8.35□□□□□ -1.07
SCFD1-201ENST00000311943 H3BVH4 76 aa8.35□□□□□ -1.07
SCFD1-201ENST00000311943 ESRGQ1W209 222 aa8.35□□□□□ -1.07
SCFD1-201ENST00000311943 ZNF876PQ49A33 203 aa8.35□□□□□ -1.07
SCFD1-201ENST00000311943 EIF5AL1Q6IS14 154 aaKnown RBP8.35□□□□□ -1.07
SCFD1-201ENST00000311943 Q6ZSN1 163 aa8.35□□□□□ -1.07
SCFD1-201ENST00000311943 BAGE2Q86Y30 109 aa8.35□□□□□ -1.07
SCFD1-201ENST00000311943 C9orf85Q96MD7 179 aa8.35□□□□□ -1.07
SCFD1-201ENST00000311943 B4DEV8 164 aa8.34□□□□□ -1.07
SCFD1-201ENST00000311943 KRBOX1C9JBD0 128 aa8.34□□□□□ -1.07
SCFD1-201ENST00000311943 PPT1P50897 306 aa8.34□□□□□ -1.07
SCFD1-201ENST00000311943 ZNF674Q2M3X9 581 aa8.34□□□□□ -1.07
SCFD1-201ENST00000311943 ZNF506Q5JVG8 444 aa8.34□□□□□ -1.07
SCFD1-201ENST00000311943 DMRTA1Q5VZB9 504 aa8.34□□□□□ -1.07
SCFD1-201ENST00000311943 FAT2Q9NYQ8 4349 aa8.34□□□□□ -1.07
SCFD1-201ENST00000311943 M0R2P5 195 aa8.34□□□□□ -1.07
SCFD1-201ENST00000311943 GZMBP10144 247 aa8.34□□□□□ -1.07
SCFD1-201ENST00000311943 BCL2P10415 239 aa8.34□□□□□ -1.07
SCFD1-201ENST00000311943 CRYBA4P53673 196 aa8.34□□□□□ -1.07
SCFD1-201ENST00000311943 TCTAP57738 103 aa8.34□□□□□ -1.07
SCFD1-201ENST00000311943 LGALS9BQ3B8N2 356 aa8.34□□□□□ -1.07
SCFD1-201ENST00000311943 CENPWQ5EE01 88 aa8.34□□□□□ -1.07
SCFD1-201ENST00000311943 UBE2DNLQ8IWF7 75 aa8.34□□□□□ -1.07
SCFD1-201ENST00000311943 ZFP30Q9Y2G7 519 aa8.34□□□□□ -1.07
SCFD1-201ENST00000311943 ARMS2P0C7Q2 107 aa8.33□□□□□ -1.08
SCFD1-201ENST00000311943 MEF2BQ02080 365 aaPredicted RBP8.33□□□□□ -1.08
SCFD1-201ENST00000311943 KCNS1Q96KK3 526 aa8.33□□□□□ -1.08
SCFD1-201ENST00000311943 C18orf15Q96N68 181 aa8.33□□□□□ -1.08
SCFD1-201ENST00000311943 MANBALQ9NQG1 85 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms