RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 FAM231CP0DMU5 169 aa14.05□□□□□ -0.16
VEGFB-201ENST00000309422 TDRG1Q3Y452 100 aa14.05□□□□□ -0.16
VEGFB-201ENST00000309422 TMEM88Q6PEY1 159 aa14.05□□□□□ -0.16
VEGFB-201ENST00000309422 UBE2DNLQ8IWF7 75 aa14.05□□□□□ -0.16
VEGFB-201ENST00000309422 TP53TG3Q9ULZ0 132 aa14.05□□□□□ -0.16
VEGFB-201ENST00000309422 APLNQ9ULZ1 77 aa14.05□□□□□ -0.16
VEGFB-201ENST00000309422 KLF12Q9Y4X4 402 aa14.05□□□□□ -0.16
VEGFB-201ENST00000309422 IGLV2-11P01706 119 aa14.04□□□□□ -0.16
VEGFB-201ENST00000309422 TAGLN2P37802 199 aaKnown RBP14.04□□□□□ -0.16
VEGFB-201ENST00000309422 OR5I1Q13606 314 aa14.04□□□□□ -0.16
VEGFB-201ENST00000309422 Q6ZTI0 123 aa14.04□□□□□ -0.16
VEGFB-201ENST00000309422 TVP23CQ96ET8 276 aa14.04□□□□□ -0.16
VEGFB-201ENST00000309422 LINC00479Q96M42 142 aa14.04□□□□□ -0.16
VEGFB-201ENST00000309422 PLECQ15149 4684 aaKnown RBP14.04□□□□□ -0.16
VEGFB-201ENST00000309422 SPINK4O60575 86 aa14.03□□□□□ -0.16
VEGFB-201ENST00000309422 LINC00612Q8N6U2 182 aa14.03□□□□□ -0.16
VEGFB-201ENST00000309422 FABP5P3A8MUU1 101 aa14.02□□□□□ -0.17
VEGFB-201ENST00000309422 BLOC1S1P78537 153 aa14.02□□□□□ -0.17
VEGFB-201ENST00000309422 MRPL16Q9NX20 251 aaKnown RBP14.02□□□□□ -0.17
VEGFB-201ENST00000309422 SACSQ9NZJ4 4579 aa14.01□□□□□ -0.17
VEGFB-201ENST00000309422 TRBV6-1A0A0K0K1D8 114 aa14.01□□□□□ -0.17
VEGFB-201ENST00000309422 SCO2A0A1W2PP80 73 aa14.01□□□□□ -0.17
VEGFB-201ENST00000309422 TYMSP04818 313 aa14.01□□□□□ -0.17
VEGFB-201ENST00000309422 S100A4P26447 101 aaKnown RBP14.01□□□□□ -0.17
VEGFB-201ENST00000309422 NKX2-5P52952 324 aaPredicted RBP14.01□□□□□ -0.17
VEGFB-201ENST00000309422 ALKAL2Q6UX46 152 aa14.01□□□□□ -0.17
VEGFB-201ENST00000309422 Q6ZQT7 251 aa14.01□□□□□ -0.17
VEGFB-201ENST00000309422 FAM162BQ5T6X4 162 aa14□□□□□ -0.17
VEGFB-201ENST00000309422 C18orf15Q96N68 181 aa14□□□□□ -0.17
VEGFB-201ENST00000309422 MDFICQ9P1T7 246 aa14□□□□□ -0.17
VEGFB-201ENST00000309422 M0R2P5 195 aa13.99□□□□□ -0.17
VEGFB-201ENST00000309422 PDE6DO43924 150 aa13.99□□□□□ -0.17
VEGFB-201ENST00000309422 NUDT3O95989 172 aa13.99□□□□□ -0.17
VEGFB-201ENST00000309422 LTAP01374 205 aa13.99□□□□□ -0.17
VEGFB-201ENST00000309422 ORM1P02763 201 aa13.99□□□□□ -0.17
VEGFB-201ENST00000309422 TENM2Q9NT68 2774 aa13.99□□□□□ -0.17
VEGFB-201ENST00000309422 IGHV3-16A0A0C4DH30 117 aa13.98□□□□□ -0.17
VEGFB-201ENST00000309422 ASIPP42127 132 aa13.98□□□□□ -0.17
VEGFB-201ENST00000309422 ZNF80P51504 273 aaPredicted RBP13.98□□□□□ -0.17
VEGFB-201ENST00000309422 MEF2BQ02080 365 aaPredicted RBP13.98□□□□□ -0.17
VEGFB-201ENST00000309422 SLAQ13239 276 aa13.98□□□□□ -0.17
VEGFB-201ENST00000309422 LYSTQ99698 3801 aa13.98□□□□□ -0.17
VEGFB-201ENST00000309422 GNRH2O43555 120 aa13.97□□□□□ -0.17
VEGFB-201ENST00000309422 BCL2P10415 239 aa13.97□□□□□ -0.17
VEGFB-201ENST00000309422 BAGE2Q86Y30 109 aa13.97□□□□□ -0.17
VEGFB-201ENST00000309422 VAX2Q9UIW0 290 aa13.97□□□□□ -0.17
VEGFB-201ENST00000309422 DNAH1Q9P2D7 4330 aa13.97□□□□□ -0.17
VEGFB-201ENST00000309422 TRAV26-1A0A087WT03 109 aa13.96□□□□□ -0.17
VEGFB-201ENST00000309422 B4DEV8 164 aa13.96□□□□□ -0.17
VEGFB-201ENST00000309422 TRGV4A0A0C4DH28 118 aa13.96□□□□□ -0.18
VEGFB-201ENST00000309422 IGHV3-53P01767 116 aa13.96□□□□□ -0.18
VEGFB-201ENST00000309422 CCL20P78556 96 aa13.96□□□□□ -0.18
VEGFB-201ENST00000309422 ZC2HC1AQ96GY0 325 aa13.96□□□□□ -0.18
VEGFB-201ENST00000309422 SH2D1AO60880 128 aa13.95□□□□□ -0.18
VEGFB-201ENST00000309422 RPL35P42766 123 aaKnown RBP13.95□□□□□ -0.18
VEGFB-201ENST00000309422 CCL18P55774 89 aa13.95□□□□□ -0.18
VEGFB-201ENST00000309422 OR4C5Q8NGB2 326 aa13.95□□□□□ -0.18
VEGFB-201ENST00000309422 PCNPQ8WW12 178 aaKnown RBP13.95□□□□□ -0.18
VEGFB-201ENST00000309422 RASL10AQ92737 203 aa13.95□□□□□ -0.18
VEGFB-201ENST00000309422 C11orf52Q96A22 123 aa13.95□□□□□ -0.18
VEGFB-201ENST00000309422 A0A0J9YY99 117 aa13.94□□□□□ -0.18
VEGFB-201ENST00000309422 M0R036 132 aa13.94□□□□□ -0.18
VEGFB-201ENST00000309422 COX8CQ7Z4L0 72 aa13.94□□□□□ -0.18
VEGFB-201ENST00000309422 POM121L12Q8N7R1 296 aa13.94□□□□□ -0.18
VEGFB-201ENST00000309422 NHLRC2Q8NBF2 726 aa13.94□□□□□ -0.18
VEGFB-201ENST00000309422 MED9Q9NWA0 146 aa13.94□□□□□ -0.18
VEGFB-201ENST00000309422 TRAV4A0A0B4J268 109 aa13.93□□□□□ -0.18
VEGFB-201ENST00000309422 C9JCJ5 164 aa13.93□□□□□ -0.18
VEGFB-201ENST00000309422 H3BNG1 76 aa13.93□□□□□ -0.18
VEGFB-201ENST00000309422 ZNF876PQ49A33 203 aa13.93□□□□□ -0.18
VEGFB-201ENST00000309422 PRR27Q6MZM9 219 aa13.93□□□□□ -0.18
VEGFB-201ENST00000309422 SYT8Q8NBV8 401 aa13.93□□□□□ -0.18
VEGFB-201ENST00000309422 PRO0255Q9UI72 69 aa13.93□□□□□ -0.18
VEGFB-201ENST00000309422 BOLA1Q9Y3E2 137 aa13.93□□□□□ -0.18
VEGFB-201ENST00000309422 HOXA5P20719 270 aa13.92□□□□□ -0.18
VEGFB-201ENST00000309422 GNG4P50150 75 aa13.92□□□□□ -0.18
VEGFB-201ENST00000309422 RNF212Q495C1 297 aa13.92□□□□□ -0.18
VEGFB-201ENST00000309422 BIN3Q9NQY0 253 aa13.92□□□□□ -0.18
VEGFB-201ENST00000309422 PAX4O43316 350 aa13.91□□□□□ -0.18
VEGFB-201ENST00000309422 MGST1P10620 155 aaKnown RBP13.91□□□□□ -0.18
VEGFB-201ENST00000309422 FAM3BP58499 235 aaPredicted RBP13.91□□□□□ -0.18
VEGFB-201ENST00000309422 ZNF674Q2M3X9 581 aa13.91□□□□□ -0.18
VEGFB-201ENST00000309422 CENPWQ5EE01 88 aa13.91□□□□□ -0.18
VEGFB-201ENST00000309422 DAZAP1Q96EP5 407 aaKnown RBP13.91□□□□□ -0.18
VEGFB-201ENST00000309422 SMIM12Q96EX1 92 aa13.91□□□□□ -0.18
VEGFB-201ENST00000309422 C11orf21Q9P2W6 132 aa13.91□□□□□ -0.18
VEGFB-201ENST00000309422 CIDEAO60543 219 aa13.9□□□□□ -0.18
VEGFB-201ENST00000309422 HHLA3Q9XRX5 114 aa13.9□□□□□ -0.18
VEGFB-201ENST00000309422 ICOSQ9Y6W8 199 aa13.9□□□□□ -0.18
VEGFB-201ENST00000309422 TMSB15BA0A087X1C1 80 aa13.89□□□□□ -0.19
VEGFB-201ENST00000309422 IGKV3D-20A0A0C4DH25 116 aa13.89□□□□□ -0.19
VEGFB-201ENST00000309422 H3BVH4 76 aa13.89□□□□□ -0.19
VEGFB-201ENST00000309422 LINC01559Q495D7 138 aa13.89□□□□□ -0.19
VEGFB-201ENST00000309422 C9orf85Q96MD7 179 aa13.89□□□□□ -0.19
VEGFB-201ENST00000309422 PHLDA3Q9Y5J5 127 aa13.89□□□□□ -0.19
VEGFB-201ENST00000309422 RYR3Q15413 4870 aa13.89□□□□□ -0.19
VEGFB-201ENST00000309422 RYR2Q92736 4967 aa13.89□□□□□ -0.19
VEGFB-201ENST00000309422 KRBOX1C9JBD0 128 aa13.88□□□□□ -0.19
VEGFB-201ENST00000309422 EIF5A2Q9GZV4 153 aaKnown RBP13.88□□□□□ -0.19
VEGFB-201ENST00000309422 IL36BQ9NZH7 164 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 742.5 ms