RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 SNAI2O43623 268 aa8.02□□□□□ -1.13
APOBEC3F-201ENST00000308521 HBDP02042 147 aa8.02□□□□□ -1.13
APOBEC3F-201ENST00000308521 FAM106CPP0CH98 169 aa8.02□□□□□ -1.13
APOBEC3F-201ENST00000308521 GATA3P23771 443 aa8.02□□□□□ -1.13
APOBEC3F-201ENST00000308521 FAM106AQ4KMX7 169 aa8.02□□□□□ -1.13
APOBEC3F-201ENST00000308521 COX8CQ7Z4L0 72 aa8.02□□□□□ -1.13
APOBEC3F-201ENST00000308521 ORMDL3Q8N138 153 aa8.02□□□□□ -1.13
APOBEC3F-201ENST00000308521 SYT8Q8NBV8 401 aa8.02□□□□□ -1.13
APOBEC3F-201ENST00000308521 ARPC1AQ92747 370 aa8.02□□□□□ -1.13
APOBEC3F-201ENST00000308521 RNF5Q99942 180 aa8.02□□□□□ -1.13
APOBEC3F-201ENST00000308521 YAE1D1Q9NRH1 226 aa8.02□□□□□ -1.13
APOBEC3F-201ENST00000308521 CREBBPQ92793 2442 aa8.02□□□□□ -1.13
APOBEC3F-201ENST00000308521 LOXL1Q08397 574 aaPredicted RBP8.01□□□□□ -1.13
APOBEC3F-201ENST00000308521 BRD3OSQ6XYD6 125 aa8.01□□□□□ -1.13
APOBEC3F-201ENST00000308521 BCL6BQ8N143 479 aaPredicted RBP8.01□□□□□ -1.13
APOBEC3F-201ENST00000308521 TEX29Q8N6K0 151 aa8.01□□□□□ -1.13
APOBEC3F-201ENST00000308521 CFHR4Q92496 578 aa8.01□□□□□ -1.13
APOBEC3F-201ENST00000308521 ZNF414Q96IQ9 312 aa8.01□□□□□ -1.13
APOBEC3F-201ENST00000308521 C17orf77Q96MU5 243 aa8.01□□□□□ -1.13
APOBEC3F-201ENST00000308521 GAGE12JA6NER3 117 aa8.01□□□□□ -1.13
APOBEC3F-201ENST00000308521 NCBP2LA6PVI3 153 aaKnown RBP8.01□□□□□ -1.13
APOBEC3F-201ENST00000308521 B5MCH6 92 aa8.01□□□□□ -1.13
APOBEC3F-201ENST00000308521 GAGE7O76087 117 aa8.01□□□□□ -1.13
APOBEC3F-201ENST00000308521 BRI3O95415 125 aa8.01□□□□□ -1.13
APOBEC3F-201ENST00000308521 GAGE12FP0CL80 117 aa8.01□□□□□ -1.13
APOBEC3F-201ENST00000308521 GAGE12GP0CL81 117 aa8.01□□□□□ -1.13
APOBEC3F-201ENST00000308521 GAGE12IP0CL82 117 aa8.01□□□□□ -1.13
APOBEC3F-201ENST00000308521 SAA4P35542 130 aa8.01□□□□□ -1.13
APOBEC3F-201ENST00000308521 GAGE4Q13068 117 aa8.01□□□□□ -1.13
APOBEC3F-201ENST00000308521 PDE6HQ13956 83 aa8.01□□□□□ -1.13
APOBEC3F-201ENST00000308521 LYZL1Q6UWQ5 148 aa8.01□□□□□ -1.13
APOBEC3F-201ENST00000308521 SH2D6Q7Z4S9 175 aa8.01□□□□□ -1.13
APOBEC3F-201ENST00000308521 CITED2Q99967 270 aaPredicted RBP8.01□□□□□ -1.13
APOBEC3F-201ENST00000308521 HECTD1Q9ULT8 2610 aa8.01□□□□□ -1.13
APOBEC3F-201ENST00000308521 SRD5A1P18405 259 aa8□□□□□ -1.13
APOBEC3F-201ENST00000308521 MXRA5Q9NR99 2828 aa8□□□□□ -1.13
APOBEC3F-201ENST00000308521 NOTCH2Q04721 2471 aa8□□□□□ -1.13
APOBEC3F-201ENST00000308521 LOC389332A0A1B0GUA5 103 aa8□□□□□ -1.13
APOBEC3F-201ENST00000308521 WI2-2373I1.2A0A1W2PRP0 233 aa8□□□□□ -1.13
APOBEC3F-201ENST00000308521 K7EIM0 57 aa8□□□□□ -1.13
APOBEC3F-201ENST00000308521 CNIH1O95406 144 aa8□□□□□ -1.13
APOBEC3F-201ENST00000308521 MT-ATP8P03928 68 aa8□□□□□ -1.13
APOBEC3F-201ENST00000308521 CACNG7P62955 275 aa8□□□□□ -1.13
APOBEC3F-201ENST00000308521 MRPL51Q4U2R6 128 aaKnown RBP8□□□□□ -1.13
APOBEC3F-201ENST00000308521 CEND1Q8N111 149 aa8□□□□□ -1.13
APOBEC3F-201ENST00000308521 ZNF491Q8N8L2 437 aa8□□□□□ -1.13
APOBEC3F-201ENST00000308521 IFI27L1Q96BM0 104 aa8□□□□□ -1.13
APOBEC3F-201ENST00000308521 C20orf78Q9BR46 151 aa8□□□□□ -1.13
APOBEC3F-201ENST00000308521 SELENOKQ9Y6D0 94 aa8□□□□□ -1.13
APOBEC3F-201ENST00000308521 CENPVL3A0A0U1RRI6 287 aa7.99□□□□□ -1.13
APOBEC3F-201ENST00000308521 LINC01546A6NGU7 62 aa7.99□□□□□ -1.13
APOBEC3F-201ENST00000308521 FBLL1A6NHQ2 334 aaKnown RBP7.99□□□□□ -1.13
APOBEC3F-201ENST00000308521 GCSHP23434 173 aa7.99□□□□□ -1.13
APOBEC3F-201ENST00000308521 FXYD2P54710 66 aa7.99□□□□□ -1.13
APOBEC3F-201ENST00000308521 AMN1Q8IY45 258 aa7.99□□□□□ -1.13
APOBEC3F-201ENST00000308521 SMIM20Q8N5G0 67 aa7.99□□□□□ -1.13
APOBEC3F-201ENST00000308521 C8orf49Q96NF6 230 aa7.99□□□□□ -1.13
APOBEC3F-201ENST00000308521 SONP18583 2426 aaKnown RBP7.99□□□□□ -1.13
APOBEC3F-201ENST00000308521 A0A1B0GWB2 263 aa7.99□□□□□ -1.13
APOBEC3F-201ENST00000308521 TMEM213A2RRL7 107 aa7.99□□□□□ -1.13
APOBEC3F-201ENST00000308521 UBE2E1P51965 193 aa7.99□□□□□ -1.13
APOBEC3F-201ENST00000308521 Q6Q795 121 aa7.99□□□□□ -1.13
APOBEC3F-201ENST00000308521 RNF125Q96EQ8 232 aa7.99□□□□□ -1.13
APOBEC3F-201ENST00000308521 AJUBAQ96IF1 538 aa7.99□□□□□ -1.13
APOBEC3F-201ENST00000308521 TPPP3Q9BW30 176 aa7.99□□□□□ -1.13
APOBEC3F-201ENST00000308521 LINC01619G3V211 115 aa7.98□□□□□ -1.13
APOBEC3F-201ENST00000308521 SH2D1AO60880 128 aa7.98□□□□□ -1.13
APOBEC3F-201ENST00000308521 XGP55808 180 aa7.98□□□□□ -1.13
APOBEC3F-201ENST00000308521 PPDPFLQ8WWR9 84 aa7.98□□□□□ -1.13
APOBEC3F-201ENST00000308521 CHAC1Q9BUX1 264 aa7.98□□□□□ -1.13
APOBEC3F-201ENST00000308521 AAMDCQ9H7C9 122 aa7.98□□□□□ -1.13
APOBEC3F-201ENST00000308521 TRAV40A0A0B4J280 105 aa7.98□□□□□ -1.13
APOBEC3F-201ENST00000308521 NBR2O15453 112 aa7.98□□□□□ -1.13
APOBEC3F-201ENST00000308521 IGHV4-38-2P0DP08 117 aa7.98□□□□□ -1.13
APOBEC3F-201ENST00000308521 SRSF2Q01130 221 aaKnown RBP7.98□□□□□ -1.13
APOBEC3F-201ENST00000308521 KLF17Q5JT82 389 aaPredicted RBP7.98□□□□□ -1.13
APOBEC3F-201ENST00000308521 ASCL2Q99929 193 aa7.98□□□□□ -1.13
APOBEC3F-201ENST00000308521 ACANP16112 2415 aa7.97□□□□□ -1.13
APOBEC3F-201ENST00000308521 FABP5P3A8MUU1 101 aa7.97□□□□□ -1.13
APOBEC3F-201ENST00000308521 RHODO00212 210 aa7.97□□□□□ -1.13
APOBEC3F-201ENST00000308521 AVPP01185 164 aa7.97□□□□□ -1.13
APOBEC3F-201ENST00000308521 RRN3P1Q2M238 152 aa7.97□□□□□ -1.13
APOBEC3F-201ENST00000308521 CITED1Q99966 193 aa7.97□□□□□ -1.13
APOBEC3F-201ENST00000308521 TMEM126AQ9H061 195 aa7.97□□□□□ -1.13
APOBEC3F-201ENST00000308521 M0R3E3 92 aa7.97□□□□□ -1.13
APOBEC3F-201ENST00000308521 NPFFO15130 113 aa7.97□□□□□ -1.13
APOBEC3F-201ENST00000308521 PLA2G2AP14555 144 aa7.97□□□□□ -1.13
APOBEC3F-201ENST00000308521 CKS2P33552 79 aa7.97□□□□□ -1.13
APOBEC3F-201ENST00000308521 C18orf15Q96N68 181 aa7.97□□□□□ -1.13
APOBEC3F-201ENST00000308521 ZMAT4Q9H898 229 aa7.97□□□□□ -1.13
APOBEC3F-201ENST00000308521 S4R3C0 116 aa7.97□□□□□ -1.13
APOBEC3F-201ENST00000308521 ITPR3Q14573 2671 aa7.96□□□□□ -1.13
APOBEC3F-201ENST00000308521 A0A087WX48 190 aa7.96□□□□□ -1.13
APOBEC3F-201ENST00000308521 IL4P05112 153 aa7.96□□□□□ -1.13
APOBEC3F-201ENST00000308521 CFAP126Q5VTH2 177 aa7.96□□□□□ -1.13
APOBEC3F-201ENST00000308521 TMEM219Q86XT9 240 aa7.96□□□□□ -1.13
APOBEC3F-201ENST00000308521 NHP2Q9NX24 153 aaKnown RBP7.96□□□□□ -1.13
APOBEC3F-201ENST00000308521 NPYP01303 97 aa7.96□□□□□ -1.14
APOBEC3F-201ENST00000308521 IGLC6P0CF74 106 aa7.96□□□□□ -1.14
APOBEC3F-201ENST00000308521 MINOS1Q5TGZ0 78 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms