RNA–Protein interactions for RNA: ENST00000307548.2

SHANK2-AS3-201, SHANK2 antisense RNA 3, humanhuman

TSL 1 (best) BASIC

Gene SHANK2-AS3, Length 1,683 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3-201ENST00000307548 A0A1B0GW15 77 aa9.47□□□□□ -0.89
SHANK2-AS3-201ENST00000307548 C7orf71A4D174 169 aa9.47□□□□□ -0.89
SHANK2-AS3-201ENST00000307548 ZNF324O75467 553 aaPredicted RBP9.47□□□□□ -0.89
SHANK2-AS3-201ENST00000307548 RNASE4P34096 147 aaKnown RBP9.47□□□□□ -0.89
SHANK2-AS3-201ENST00000307548 ACTL10Q5JWF8 245 aa9.47□□□□□ -0.89
SHANK2-AS3-201ENST00000307548 DNLZQ5SXM8 178 aa9.47□□□□□ -0.89
SHANK2-AS3-201ENST00000307548 PGLYRP4Q96LB8 373 aa9.47□□□□□ -0.89
SHANK2-AS3-201ENST00000307548 A0A1B0GUT8 65 aa9.46□□□□□ -0.89
SHANK2-AS3-201ENST00000307548 F2Z2F3 143 aa9.46□□□□□ -0.89
SHANK2-AS3-201ENST00000307548 CTRLP40313 264 aa9.46□□□□□ -0.89
SHANK2-AS3-201ENST00000307548 PRR31Q5SQ13 230 aa9.46□□□□□ -0.89
SHANK2-AS3-201ENST00000307548 TMEM136Q6ZRR5 245 aa9.46□□□□□ -0.89
SHANK2-AS3-201ENST00000307548 SSBP4Q9BWG4 385 aaPredicted RBP9.46□□□□□ -0.89
SHANK2-AS3-201ENST00000307548 CNFNQ9BYD5 112 aa9.46□□□□□ -0.89
SHANK2-AS3-201ENST00000307548 C19orf73Q9NVV2 129 aa9.46□□□□□ -0.89
SHANK2-AS3-201ENST00000307548 TRAPPC1Q9Y5R8 145 aa9.46□□□□□ -0.89
SHANK2-AS3-201ENST00000307548 MGAM2Q2M2H8 2515 aa9.46□□□□□ -0.9
SHANK2-AS3-201ENST00000307548 HLA-DQA1P01909 254 aa9.45□□□□□ -0.9
SHANK2-AS3-201ENST00000307548 FRMD6-AS1P0C7T7 363 aa9.45□□□□□ -0.9
SHANK2-AS3-201ENST00000307548 RIGQ13278 110 aa9.45□□□□□ -0.9
SHANK2-AS3-201ENST00000307548 KIR3DS1Q14943 382 aa9.45□□□□□ -0.9
SHANK2-AS3-201ENST00000307548 TDRG1Q3Y452 100 aa9.45□□□□□ -0.9
SHANK2-AS3-201ENST00000307548 MRPL54Q6P161 138 aaKnown RBP9.45□□□□□ -0.9
SHANK2-AS3-201ENST00000307548 FER1L6-AS1Q8NA97 138 aa9.45□□□□□ -0.9
SHANK2-AS3-201ENST00000307548 GATD1Q8NB37 220 aa9.45□□□□□ -0.9
SHANK2-AS3-201ENST00000307548 AGRNO00468 2067 aa9.45□□□□□ -0.9
SHANK2-AS3-201ENST00000307548 TMSB15BA0A087X1C1 80 aa9.45□□□□□ -0.9
SHANK2-AS3-201ENST00000307548 SPINK4O60575 86 aa9.45□□□□□ -0.9
SHANK2-AS3-201ENST00000307548 AMBPP02760 352 aa9.45□□□□□ -0.9
SHANK2-AS3-201ENST00000307548 S100A8P05109 93 aa9.45□□□□□ -0.9
SHANK2-AS3-201ENST00000307548 HBBP68871 147 aa9.45□□□□□ -0.9
SHANK2-AS3-201ENST00000307548 GFI1BQ5VTD9 330 aa9.45□□□□□ -0.9
SHANK2-AS3-201ENST00000307548 LYZL1Q6UWQ5 148 aa9.45□□□□□ -0.9
SHANK2-AS3-201ENST00000307548 Q6ZQT7 251 aa9.45□□□□□ -0.9
SHANK2-AS3-201ENST00000307548 KCNS1Q96KK3 526 aa9.45□□□□□ -0.9
SHANK2-AS3-201ENST00000307548 RBMY1BA6NDE4 496 aaKnown RBP9.44□□□□□ -0.9
SHANK2-AS3-201ENST00000307548 RBMY1EA6NEQ0 496 aaKnown RBP9.44□□□□□ -0.9
SHANK2-AS3-201ENST00000307548 J3KRW8 73 aa9.44□□□□□ -0.9
SHANK2-AS3-201ENST00000307548 SNAI2O43623 268 aa9.44□□□□□ -0.9
SHANK2-AS3-201ENST00000307548 IGKV3-20P01619 116 aa9.44□□□□□ -0.9
SHANK2-AS3-201ENST00000307548 OR5AL1P0C617 328 aa9.44□□□□□ -0.9
SHANK2-AS3-201ENST00000307548 RBMY1DP0C7P1 496 aaKnown RBP9.44□□□□□ -0.9
SHANK2-AS3-201ENST00000307548 MED14OSP0DP75 135 aa9.44□□□□□ -0.9
SHANK2-AS3-201ENST00000307548 FABP9Q0Z7S8 132 aa9.44□□□□□ -0.9
SHANK2-AS3-201ENST00000307548 ZNF124Q15973 351 aa9.44□□□□□ -0.9
SHANK2-AS3-201ENST00000307548 TRPT1Q86TN4 253 aaKnown RBP9.44□□□□□ -0.9
SHANK2-AS3-201ENST00000307548 FRZBQ92765 325 aa9.44□□□□□ -0.9
SHANK2-AS3-201ENST00000307548 BORCS7Q96B45 105 aa9.44□□□□□ -0.9
SHANK2-AS3-201ENST00000307548 C20orf144Q9BQM9 153 aa9.44□□□□□ -0.9
SHANK2-AS3-201ENST00000307548 IGHV4-4A0A075B6R2 117 aa9.43□□□□□ -0.9
SHANK2-AS3-201ENST00000307548 SNURFLB1AK76 121 aa9.43□□□□□ -0.9
SHANK2-AS3-201ENST00000307548 M0R2Z0 102 aa9.43□□□□□ -0.9
SHANK2-AS3-201ENST00000307548 CRXO43186 299 aaPredicted RBP9.43□□□□□ -0.9
SHANK2-AS3-201ENST00000307548 CD7P09564 240 aa9.43□□□□□ -0.9
SHANK2-AS3-201ENST00000307548 ARMS2P0C7Q2 107 aa9.43□□□□□ -0.9
SHANK2-AS3-201ENST00000307548 SPINK13Q1W4C9 94 aa9.43□□□□□ -0.9
SHANK2-AS3-201ENST00000307548 ANXA2RQ3ZCQ2 193 aa9.43□□□□□ -0.9
SHANK2-AS3-201ENST00000307548 STHQ8IWL8 128 aa9.43□□□□□ -0.9
SHANK2-AS3-201ENST00000307548 TRAV12-3A0A0B4J271 114 aa9.42□□□□□ -0.9
SHANK2-AS3-201ENST00000307548 GRIFINA4D1Z8 144 aa9.42□□□□□ -0.9
SHANK2-AS3-201ENST00000307548 HIST1H2BKO60814 126 aa9.42□□□□□ -0.9
SHANK2-AS3-201ENST00000307548 HIST1H2BJP06899 126 aa9.42□□□□□ -0.9
SHANK2-AS3-201ENST00000307548 HIST1H2BOP23527 126 aa9.42□□□□□ -0.9
SHANK2-AS3-201ENST00000307548 HIST1H2BBP33778 126 aa9.42□□□□□ -0.9
SHANK2-AS3-201ENST00000307548 HIST1H2BDP58876 126 aa9.42□□□□□ -0.9
SHANK2-AS3-201ENST00000307548 HIST1H2BCP62807 126 aa9.42□□□□□ -0.9
SHANK2-AS3-201ENST00000307548 HIST2H2BEQ16778 126 aa9.42□□□□□ -0.9
SHANK2-AS3-201ENST00000307548 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.42□□□□□ -0.9
SHANK2-AS3-201ENST00000307548 ZNF493Q6ZR52 646 aa9.42□□□□□ -0.9
SHANK2-AS3-201ENST00000307548 HIST1H2BHQ93079 126 aa9.42□□□□□ -0.9
SHANK2-AS3-201ENST00000307548 HIST1H2BNQ99877 126 aa9.42□□□□□ -0.9
SHANK2-AS3-201ENST00000307548 HIST1H2BMQ99879 126 aa9.42□□□□□ -0.9
SHANK2-AS3-201ENST00000307548 MRPL18Q9H0U6 180 aaKnown RBP9.42□□□□□ -0.9
SHANK2-AS3-201ENST00000307548 TRGC1P0CF51 173 aa9.42□□□□□ -0.9
SHANK2-AS3-201ENST00000307548 FAM159AQ6UWV7 190 aa9.42□□□□□ -0.9
SHANK2-AS3-201ENST00000307548 LINC00467Q9BRT7 94 aa9.42□□□□□ -0.9
SHANK2-AS3-201ENST00000307548 SCRT2Q9NQ03 307 aa9.42□□□□□ -0.9
SHANK2-AS3-201ENST00000307548 TRAV12-2A0A075B6T6 113 aa9.41□□□□□ -0.9
SHANK2-AS3-201ENST00000307548 ASIPP42127 132 aa9.41□□□□□ -0.9
SHANK2-AS3-201ENST00000307548 CAMPP49913 170 aa9.41□□□□□ -0.9
SHANK2-AS3-201ENST00000307548 CACNG7P62955 275 aa9.41□□□□□ -0.9
SHANK2-AS3-201ENST00000307548 EGFEM1PQ0D2K5 195 aa9.41□□□□□ -0.9
SHANK2-AS3-201ENST00000307548 ZFP82Q8N141 532 aa9.41□□□□□ -0.9
SHANK2-AS3-201ENST00000307548 IGHV1OR15-1A0A075B7D0 117 aa9.4□□□□□ -0.9
SHANK2-AS3-201ENST00000307548 APCSP02743 223 aa9.4□□□□□ -0.9
SHANK2-AS3-201ENST00000307548 RAB4BP61018 213 aa9.4□□□□□ -0.9
SHANK2-AS3-201ENST00000307548 NUTF2P61970 127 aaKnown RBP9.4□□□□□ -0.9
SHANK2-AS3-201ENST00000307548 SAMD5Q5TGI4 173 aa9.4□□□□□ -0.9
SHANK2-AS3-201ENST00000307548 TPPP3Q9BW30 176 aa9.4□□□□□ -0.9
SHANK2-AS3-201ENST00000307548 NAGKQ9UJ70 344 aa9.4□□□□□ -0.9
SHANK2-AS3-201ENST00000307548 GNRH2O43555 120 aa9.39□□□□□ -0.91
SHANK2-AS3-201ENST00000307548 NTF3P20783 257 aa9.39□□□□□ -0.91
SHANK2-AS3-201ENST00000307548 MUC21Q5SSG8 566 aa9.39□□□□□ -0.91
SHANK2-AS3-201ENST00000307548 RNASE3P12724 160 aaKnown RBP9.39□□□□□ -0.91
SHANK2-AS3-201ENST00000307548 SLAQ13239 276 aa9.39□□□□□ -0.91
SHANK2-AS3-201ENST00000307548 COA6Q5JTJ3 125 aaKnown RBP9.39□□□□□ -0.91
SHANK2-AS3-201ENST00000307548 MORN3Q6PF18 240 aaPredicted RBP9.39□□□□□ -0.91
SHANK2-AS3-201ENST00000307548 TP53TG3Q9ULZ0 132 aa9.39□□□□□ -0.91
SHANK2-AS3-201ENST00000307548 C5orf52A6NGY3 159 aa9.38□□□□□ -0.91
SHANK2-AS3-201ENST00000307548 G3V4G9 280 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms