RNA–Protein interactions for RNA: ENST00000304236.2

RAB40A-201, Transcript of RAB40A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40A, Length 1,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40A-201ENST00000304236 C9orf139Q6ZV77 190 aa10.86□□□□□ -0.67
RAB40A-201ENST00000304236 RNF185Q96GF1 192 aa10.86□□□□□ -0.67
RAB40A-201ENST00000304236 LENEPQ9Y5L5 61 aa10.86□□□□□ -0.67
RAB40A-201ENST00000304236 IGHV4-61A0A0C4DH41 118 aa10.85□□□□□ -0.67
RAB40A-201ENST00000304236 LINC01546A6NGU7 62 aa10.85□□□□□ -0.67
RAB40A-201ENST00000304236 NDUFA4O00483 81 aa10.85□□□□□ -0.67
RAB40A-201ENST00000304236 ARL3P36405 182 aa10.85□□□□□ -0.67
RAB40A-201ENST00000304236 C12orf54Q6X4T0 127 aa10.85□□□□□ -0.67
RAB40A-201ENST00000304236 OR8A1Q8NGG7 326 aa10.85□□□□□ -0.67
RAB40A-201ENST00000304236 OR1N2Q8NGR9 330 aa10.85□□□□□ -0.67
RAB40A-201ENST00000304236 GLMPQ8WWB7 406 aa10.85□□□□□ -0.67
RAB40A-201ENST00000304236 USMG5Q96IX5 58 aa10.85□□□□□ -0.67
RAB40A-201ENST00000304236 C16orf92Q96LL3 132 aa10.85□□□□□ -0.67
RAB40A-201ENST00000304236 DNHD1Q96M86 4753 aa10.85□□□□□ -0.67
RAB40A-201ENST00000304236 IGHV3OR16-13A0A075B7E8 117 aa10.85□□□□□ -0.67
RAB40A-201ENST00000304236 IGHV3-74A0A0B4J1X5 117 aa10.85□□□□□ -0.67
RAB40A-201ENST00000304236 TRAV40A0A0B4J280 105 aa10.85□□□□□ -0.67
RAB40A-201ENST00000304236 ZNF207O43670 478 aaKnown RBP10.85□□□□□ -0.67
RAB40A-201ENST00000304236 NPSP0C0P6 89 aa10.85□□□□□ -0.67
RAB40A-201ENST00000304236 COX8AP10176 69 aa10.85□□□□□ -0.67
RAB40A-201ENST00000304236 SMIM15Q7Z3B0 74 aa10.85□□□□□ -0.67
RAB40A-201ENST00000304236 ZNF738Q8NE65 137 aa10.85□□□□□ -0.67
RAB40A-201ENST00000304236 ATRQ13535 2644 aa10.84□□□□□ -0.67
RAB40A-201ENST00000304236 IGHV3OR16-10A0A075B7F0 116 aa10.84□□□□□ -0.67
RAB40A-201ENST00000304236 IGKV3D-20A0A0C4DH25 116 aa10.84□□□□□ -0.67
RAB40A-201ENST00000304236 SMKR1H3BMG3 65 aa10.84□□□□□ -0.67
RAB40A-201ENST00000304236 NXT2Q9NPJ8 142 aaKnown RBP10.84□□□□□ -0.67
RAB40A-201ENST00000304236 COX11Q9Y6N1 276 aa10.84□□□□□ -0.67
RAB40A-201ENST00000304236 COL6A5A8TX70 2615 aa10.83□□□□□ -0.68
RAB40A-201ENST00000304236 IGHV3-49A0A0A0MS15 119 aa10.83□□□□□ -0.68
RAB40A-201ENST00000304236 NCR2O95944 276 aa10.83□□□□□ -0.68
RAB40A-201ENST00000304236 IGHG2P01859 326 aa10.83□□□□□ -0.68
RAB40A-201ENST00000304236 CACNG7P62955 275 aa10.83□□□□□ -0.68
RAB40A-201ENST00000304236 BRD3OSQ6XYD6 125 aa10.83□□□□□ -0.68
RAB40A-201ENST00000304236 IFI27L1Q96BM0 104 aa10.83□□□□□ -0.68
RAB40A-201ENST00000304236 MCRIP2Q9BUT9 160 aaKnown RBP10.83□□□□□ -0.68
RAB40A-201ENST00000304236 MSRB1Q9NZV6 116 aa10.83□□□□□ -0.68
RAB40A-201ENST00000304236 A6NDX4 124 aa10.83□□□□□ -0.68
RAB40A-201ENST00000304236 LINC00477Q96M19 166 aa10.83□□□□□ -0.68
RAB40A-201ENST00000304236 FBN1P35555 2871 aaKnown RBP10.82□□□□□ -0.68
RAB40A-201ENST00000304236 TNFRSF6BO95407 300 aa10.82□□□□□ -0.68
RAB40A-201ENST00000304236 PSMG4Q5JS54 123 aa10.82□□□□□ -0.68
RAB40A-201ENST00000304236 IGHV4-4A0A075B6R2 117 aa10.81□□□□□ -0.68
RAB40A-201ENST00000304236 OVOL1O14753 267 aa10.81□□□□□ -0.68
RAB40A-201ENST00000304236 NUDT3O95989 172 aa10.81□□□□□ -0.68
RAB40A-201ENST00000304236 SRD5A1P18405 259 aa10.81□□□□□ -0.68
RAB40A-201ENST00000304236 PPIFP30405 207 aaKnown RBP10.81□□□□□ -0.68
RAB40A-201ENST00000304236 MPV17L2Q567V2 206 aa10.81□□□□□ -0.68
RAB40A-201ENST00000304236 C11orf21Q9P2W6 132 aa10.81□□□□□ -0.68
RAB40A-201ENST00000304236 LINC00527Q9UJ94 153 aa10.81□□□□□ -0.68
RAB40A-201ENST00000304236 FCER1GP30273 86 aa10.81□□□□□ -0.68
RAB40A-201ENST00000304236 BVES-AS1Q5T3Y7 98 aa10.81□□□□□ -0.68
RAB40A-201ENST00000304236 SNAI2O43623 268 aa10.8□□□□□ -0.68
RAB40A-201ENST00000304236 TGFAP01135 160 aa10.8□□□□□ -0.68
RAB40A-201ENST00000304236 IGHV4-38-2P0DP08 117 aa10.8□□□□□ -0.68
RAB40A-201ENST00000304236 ANK3Q12955 4377 aaKnown RBP10.8□□□□□ -0.68
RAB40A-201ENST00000304236 A0A0G2JLM5 398 aa10.79□□□□□ -0.68
RAB40A-201ENST00000304236 IGHV7-4-1A0A0J9YVY3 117 aa10.79□□□□□ -0.68
RAB40A-201ENST00000304236 PRSS47A8MTI9 375 aa10.79□□□□□ -0.68
RAB40A-201ENST00000304236 H3BUX3 64 aa10.79□□□□□ -0.68
RAB40A-201ENST00000304236 LY6EQ16553 131 aa10.79□□□□□ -0.68
RAB40A-201ENST00000304236 DEFB125Q8N687 156 aa10.79□□□□□ -0.68
RAB40A-201ENST00000304236 Q8N8P6 123 aa10.79□□□□□ -0.68
RAB40A-201ENST00000304236 OR10J6PQ8NGY7 276 aa10.79□□□□□ -0.68
RAB40A-201ENST00000304236 MSMBP08118 114 aa10.79□□□□□ -0.68
RAB40A-201ENST00000304236 LEPP41159 167 aa10.78□□□□□ -0.68
RAB40A-201ENST00000304236 UBE2V1Q13404 147 aa10.78□□□□□ -0.68
RAB40A-201ENST00000304236 OR2K2Q8NGT1 345 aa10.78□□□□□ -0.68
RAB40A-201ENST00000304236 TRAV21A0A0B4J279 112 aa10.77□□□□□ -0.68
RAB40A-201ENST00000304236 SOCS3O14543 225 aa10.77□□□□□ -0.68
RAB40A-201ENST00000304236 PTTG1IPP53801 180 aa10.77□□□□□ -0.68
RAB40A-201ENST00000304236 FOXE3Q13461 319 aa10.77□□□□□ -0.68
RAB40A-201ENST00000304236 SPANXN1Q5VSR9 72 aa10.77□□□□□ -0.68
RAB40A-201ENST00000304236 UNQ9165/PRO28630Q6UXU0 137 aa10.77□□□□□ -0.68
RAB40A-201ENST00000304236 C20orf173Q96LM9 149 aa10.77□□□□□ -0.68
RAB40A-201ENST00000304236 ZNF580Q9UK33 172 aa10.77□□□□□ -0.68
RAB40A-201ENST00000304236 TRBV7-9A0A0J9YWB2 115 aa10.77□□□□□ -0.69
RAB40A-201ENST00000304236 SIVA1O15304 175 aa10.77□□□□□ -0.69
RAB40A-201ENST00000304236 TRBV12-3P01733 135 aa10.77□□□□□ -0.69
RAB40A-201ENST00000304236 PF4V1P10720 104 aa10.77□□□□□ -0.69
RAB40A-201ENST00000304236 GATA3P23771 443 aa10.77□□□□□ -0.69
RAB40A-201ENST00000304236 FXYD7P58549 80 aa10.77□□□□□ -0.69
RAB40A-201ENST00000304236 ANKRD39Q53RE8 183 aa10.77□□□□□ -0.69
RAB40A-201ENST00000304236 LINC01356Q8N9X3 169 aa10.77□□□□□ -0.69
RAB40A-201ENST00000304236 OR4X2Q8NGF9 303 aa10.77□□□□□ -0.69
RAB40A-201ENST00000304236 TP73-AS1Q9UF72 201 aa10.77□□□□□ -0.69
RAB40A-201ENST00000304236 FBN3Q75N90 2809 aa10.77□□□□□ -0.69
RAB40A-201ENST00000304236 IGLV1-40P01703 118 aa10.76□□□□□ -0.69
RAB40A-201ENST00000304236 EVI2AP22794 236 aa10.76□□□□□ -0.69
RAB40A-201ENST00000304236 KRTAP24-1Q3LI83 254 aa10.76□□□□□ -0.69
RAB40A-201ENST00000304236 C2orf91Q6ZV80 131 aa10.76□□□□□ -0.69
RAB40A-201ENST00000304236 GPHB5Q86YW7 130 aa10.76□□□□□ -0.69
RAB40A-201ENST00000304236 BOD1L2Q8IYS8 172 aa10.76□□□□□ -0.69
RAB40A-201ENST00000304236 OR9G4Q8NGQ1 327 aa10.76□□□□□ -0.69
RAB40A-201ENST00000304236 MRAP2Q96G30 205 aa10.76□□□□□ -0.69
RAB40A-201ENST00000304236 B4DSR2 109 aa10.76□□□□□ -0.69
RAB40A-201ENST00000304236 FGF6P10767 208 aa10.76□□□□□ -0.69
RAB40A-201ENST00000304236 SMPXQ9UHP9 88 aa10.76□□□□□ -0.69
RAB40A-201ENST00000304236 MXRA5Q9NR99 2828 aa10.75□□□□□ -0.69
RAB40A-201ENST00000304236 STAB1Q9NY15 2570 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms