RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 C11orf72Q8NBR9 251 aa6.82□□□□□ -1.32
RFX3-201ENST00000302303 NUDT10Q8NFP7 164 aa6.82□□□□□ -1.32
RFX3-201ENST00000302303 OR11H2Q8NH07 326 aa6.82□□□□□ -1.32
RFX3-201ENST00000302303 RNASE8Q8TDE3 154 aaKnown RBP6.82□□□□□ -1.32
RFX3-201ENST00000302303 ISOC2Q96AB3 205 aa6.82□□□□□ -1.32
RFX3-201ENST00000302303 NUDT11Q96G61 164 aa6.82□□□□□ -1.32
RFX3-201ENST00000302303 PYGO2Q9BRQ0 406 aa6.82□□□□□ -1.32
RFX3-201ENST00000302303 SEC11CQ9BY50 192 aa6.82□□□□□ -1.32
RFX3-201ENST00000302303 RNASE7Q9H1E1 156 aaKnown RBP6.82□□□□□ -1.32
RFX3-201ENST00000302303 NAT8Q9UHE5 227 aa6.82□□□□□ -1.32
RFX3-201ENST00000302303 IGHV3OR16-12A0A075B7B8 117 aa6.81□□□□□ -1.32
RFX3-201ENST00000302303 IGHV1OR15-1A0A075B7D0 117 aa6.81□□□□□ -1.32
RFX3-201ENST00000302303 MGST1P10620 155 aaKnown RBP6.81□□□□□ -1.32
RFX3-201ENST00000302303 PRR27Q6MZM9 219 aa6.81□□□□□ -1.32
RFX3-201ENST00000302303 IL17DQ8TAD2 202 aa6.81□□□□□ -1.32
RFX3-201ENST00000302303 LINC01587Q99440 93 aa6.81□□□□□ -1.32
RFX3-201ENST00000302303 NIPSNAP3BQ9BS92 247 aa6.81□□□□□ -1.32
RFX3-201ENST00000302303 MDFICQ9P1T7 246 aa6.81□□□□□ -1.32
RFX3-201ENST00000302303 CARHSP1Q9Y2V2 147 aaKnown RBP6.81□□□□□ -1.32
RFX3-201ENST00000302303 GOLT1BQ9Y3E0 138 aa6.81□□□□□ -1.32
RFX3-201ENST00000302303 F8W036 122 aa6.81□□□□□ -1.32
RFX3-201ENST00000302303 TYMSP04818 313 aa6.81□□□□□ -1.32
RFX3-201ENST00000302303 RNASE3P12724 160 aaKnown RBP6.81□□□□□ -1.32
RFX3-201ENST00000302303 DNLZQ5SXM8 178 aa6.81□□□□□ -1.32
RFX3-201ENST00000302303 FAM231DQ6ZW35 169 aa6.81□□□□□ -1.32
RFX3-201ENST00000302303 IGHV3-16A0A0C4DH30 117 aa6.8□□□□□ -1.32
RFX3-201ENST00000302303 IGHV4-28A0A0C4DH34 117 aa6.8□□□□□ -1.32
RFX3-201ENST00000302303 SMIM9A6NGZ8 99 aa6.8□□□□□ -1.32
RFX3-201ENST00000302303 M0R036 132 aa6.8□□□□□ -1.32
RFX3-201ENST00000302303 NDUFA5Q16718 116 aa6.8□□□□□ -1.32
RFX3-201ENST00000302303 SPATA25Q9BR10 227 aa6.8□□□□□ -1.32
RFX3-201ENST00000302303 V9GYV3 84 aa6.8□□□□□ -1.32
RFX3-201ENST00000302303 DEFB4AO15263 64 aa6.79□□□□□ -1.32
RFX3-201ENST00000302303 ORM1P02763 201 aa6.79□□□□□ -1.32
RFX3-201ENST00000302303 GZMBP10144 247 aa6.79□□□□□ -1.32
RFX3-201ENST00000302303 HTN1P15515 57 aa6.79□□□□□ -1.32
RFX3-201ENST00000302303 ADIRFQ15847 76 aa6.79□□□□□ -1.32
RFX3-201ENST00000302303 FAM159AQ6UWV7 190 aa6.79□□□□□ -1.32
RFX3-201ENST00000302303 TMEM208Q9BTX3 173 aa6.79□□□□□ -1.32
RFX3-201ENST00000302303 GSN-AS1Q9NRJ2 163 aa6.79□□□□□ -1.32
RFX3-201ENST00000302303 OSTCQ9NRP0 149 aa6.79□□□□□ -1.32
RFX3-201ENST00000302303 NAGKQ9UJ70 344 aa6.79□□□□□ -1.32
RFX3-201ENST00000302303 TMSB15BA0A087X1C1 80 aa6.78□□□□□ -1.32
RFX3-201ENST00000302303 GRIFINA4D1Z8 144 aa6.78□□□□□ -1.32
RFX3-201ENST00000302303 B4DEV8 164 aa6.78□□□□□ -1.32
RFX3-201ENST00000302303 IGLC6P0CF74 106 aa6.78□□□□□ -1.32
RFX3-201ENST00000302303 NHLRC4P0CG21 123 aaPredicted RBP6.78□□□□□ -1.32
RFX3-201ENST00000302303 MIFP14174 115 aa6.78□□□□□ -1.32
RFX3-201ENST00000302303 RRN3P1Q2M238 152 aa6.78□□□□□ -1.32
RFX3-201ENST00000302303 IBA57Q5T440 356 aaKnown RBP6.78□□□□□ -1.32
RFX3-201ENST00000302303 TMEM263Q8WUH6 116 aaKnown RBP6.78□□□□□ -1.32
RFX3-201ENST00000302303 GTSF1Q8WW33 167 aa6.78□□□□□ -1.32
RFX3-201ENST00000302303 SFRP2Q96HF1 295 aa6.78□□□□□ -1.32
RFX3-201ENST00000302303 KCNS1Q96KK3 526 aa6.78□□□□□ -1.32
RFX3-201ENST00000302303 C9orf85Q96MD7 179 aa6.78□□□□□ -1.32
RFX3-201ENST00000302303 SSBP4Q9BWG4 385 aaPredicted RBP6.78□□□□□ -1.32
RFX3-201ENST00000302303 SCRT2Q9NQ03 307 aa6.78□□□□□ -1.32
RFX3-201ENST00000302303 MUC4Q99102 2169 aa6.77□□□□□ -1.33
RFX3-201ENST00000302303 CBY3A6NI87 242 aa6.77□□□□□ -1.33
RFX3-201ENST00000302303 P01737 135 aa6.77□□□□□ -1.33
RFX3-201ENST00000302303 CXCL1P09341 107 aa6.77□□□□□ -1.33
RFX3-201ENST00000302303 TCL1AP56279 114 aa6.77□□□□□ -1.33
RFX3-201ENST00000302303 ERVFC1-1P60608 527 aa6.77□□□□□ -1.33
RFX3-201ENST00000302303 PNRC1Q12796 327 aaPredicted RBP6.77□□□□□ -1.33
RFX3-201ENST00000302303 ZNF493Q6ZR52 646 aa6.77□□□□□ -1.33
RFX3-201ENST00000302303 OR2D3Q8NGH3 330 aa6.77□□□□□ -1.33
RFX3-201ENST00000302303 BIN3Q9NQY0 253 aa6.77□□□□□ -1.33
RFX3-201ENST00000302303 CELA1Q9UNI1 258 aa6.77□□□□□ -1.33
RFX3-201ENST00000302303 TMEM189A5PLL7 270 aa6.76□□□□□ -1.33
RFX3-201ENST00000302303 ARMS2P0C7Q2 107 aa6.76□□□□□ -1.33
RFX3-201ENST00000302303 FOXA3P55318 350 aaPredicted RBP6.76□□□□□ -1.33
RFX3-201ENST00000302303 DAZ2Q13117 558 aaKnown RBP6.76□□□□□ -1.33
RFX3-201ENST00000302303 RNF212Q495C1 297 aa6.76□□□□□ -1.33
RFX3-201ENST00000302303 LINC00612Q8N6U2 182 aa6.76□□□□□ -1.33
RFX3-201ENST00000302303 OR10G8Q8NGN5 311 aa6.76□□□□□ -1.33
RFX3-201ENST00000302303 DAZAP1Q96EP5 407 aaKnown RBP6.76□□□□□ -1.33
RFX3-201ENST00000302303 C16orf74Q96GX8 76 aa6.76□□□□□ -1.33
RFX3-201ENST00000302303 RPP21Q9H633 154 aaKnown RBP6.76□□□□□ -1.33
RFX3-201ENST00000302303 ZMAT4Q9H898 229 aa6.76□□□□□ -1.33
RFX3-201ENST00000302303 EDA2RQ9HAV5 297 aa6.76□□□□□ -1.33
RFX3-201ENST00000302303 IL36BQ9NZH7 164 aa6.76□□□□□ -1.33
RFX3-201ENST00000302303 A0A0J9YWU9 116 aa6.76□□□□□ -1.33
RFX3-201ENST00000302303 SNAI2O43623 268 aa6.76□□□□□ -1.33
RFX3-201ENST00000302303 GATCO43716 136 aaKnown RBP6.76□□□□□ -1.33
RFX3-201ENST00000302303 SPINK4O60575 86 aa6.76□□□□□ -1.33
RFX3-201ENST00000302303 CT83Q5H943 113 aa6.76□□□□□ -1.33
RFX3-201ENST00000302303 ATRAIDQ6UW56 229 aa6.76□□□□□ -1.33
RFX3-201ENST00000302303 CLRN3Q8NCR9 226 aa6.76□□□□□ -1.33
RFX3-201ENST00000302303 C11orf68Q9H3H3 251 aaKnown RBP6.76□□□□□ -1.33
RFX3-201ENST00000302303 DKK2Q9UBU2 259 aa6.76□□□□□ -1.33
RFX3-201ENST00000302303 TGP01266 2768 aa6.75□□□□□ -1.33
RFX3-201ENST00000302303 STAB2Q8WWQ8 2551 aa6.75□□□□□ -1.33
RFX3-201ENST00000302303 TRGV11A0A075B6L2 103 aa6.75□□□□□ -1.33
RFX3-201ENST00000302303 SMIM27A0A1W2PRY6 76 aa6.75□□□□□ -1.33
RFX3-201ENST00000302303 C7orf77A4D0Y5 90 aa6.75□□□□□ -1.33
RFX3-201ENST00000302303 APOC3P02656 99 aa6.75□□□□□ -1.33
RFX3-201ENST00000302303 OR5AL1P0C617 328 aa6.75□□□□□ -1.33
RFX3-201ENST00000302303 POM121L12Q8N7R1 296 aa6.75□□□□□ -1.33
RFX3-201ENST00000302303 NOP10Q9NPE3 64 aaKnown RBP6.75□□□□□ -1.33
RFX3-201ENST00000302303 TIMM8BQ9Y5J9 83 aaPredicted RBP6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms