RNA–Protein interactions for RNA: ENST00000302278.7

ITGB1-201, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ITGB1, Length 3,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-201ENST00000302278 FAUP35544 74 aaKnown RBP4.21□□□□□ -1.74
ITGB1-201ENST00000302278 RPL29P47914 159 aaKnown RBP4.21□□□□□ -1.74
ITGB1-201ENST00000302278 SSTP61278 116 aa4.21□□□□□ -1.74
ITGB1-201ENST00000302278 SLC38A11Q08AI6 406 aa4.21□□□□□ -1.74
ITGB1-201ENST00000302278 ERCC8Q13216 396 aa4.21□□□□□ -1.74
ITGB1-201ENST00000302278 CIRBPQ14011 172 aaKnown RBP4.21□□□□□ -1.74
ITGB1-201ENST00000302278 Q5BKY6 102 aa4.21□□□□□ -1.74
ITGB1-201ENST00000302278 C9orf62Q8N4C0 152 aa4.21□□□□□ -1.74
ITGB1-201ENST00000302278 Q8N976 141 aa4.21□□□□□ -1.74
ITGB1-201ENST00000302278 MARVELD1Q9BSK0 173 aa4.21□□□□□ -1.74
ITGB1-201ENST00000302278 TRGV11A0A075B6L2 103 aa4.2□□□□□ -1.74
ITGB1-201ENST00000302278 COX7A2P2O60397 106 aa4.2□□□□□ -1.74
ITGB1-201ENST00000302278 HIST1H1EP10412 219 aaKnown RBP4.2□□□□□ -1.74
ITGB1-201ENST00000302278 S100PP25815 95 aa4.2□□□□□ -1.74
ITGB1-201ENST00000302278 CTAG1AP78358 180 aa4.2□□□□□ -1.74
ITGB1-201ENST00000302278 LINC01559Q495D7 138 aa4.2□□□□□ -1.74
ITGB1-201ENST00000302278 ARL6IP6Q8N6S5 226 aa4.2□□□□□ -1.74
ITGB1-201ENST00000302278 OR10G9Q8NGN4 311 aa4.2□□□□□ -1.74
ITGB1-201ENST00000302278 MGAT4CQ9UBM8 478 aa4.2□□□□□ -1.74
ITGB1-201ENST00000302278 C1orf196B1AJZ1 125 aa4.2□□□□□ -1.74
ITGB1-201ENST00000302278 RNASE4P34096 147 aaKnown RBP4.2□□□□□ -1.74
ITGB1-201ENST00000302278 RPL37AP61513 92 aaKnown RBP4.2□□□□□ -1.74
ITGB1-201ENST00000302278 ARL16Q0P5N6 197 aa4.2□□□□□ -1.74
ITGB1-201ENST00000302278 PPP1R1AQ13522 171 aa4.2□□□□□ -1.74
ITGB1-201ENST00000302278 SVBPQ8N300 66 aa4.2□□□□□ -1.74
ITGB1-201ENST00000302278 WDR83OSQ9Y284 106 aa4.2□□□□□ -1.74
ITGB1-201ENST00000302278 KANTRA0A1W2PQU2 76 aa4.2□□□□□ -1.74
ITGB1-201ENST00000302278 M0R2P5 195 aa4.2□□□□□ -1.74
ITGB1-201ENST00000302278 IGHV3-53P01767 116 aa4.2□□□□□ -1.74
ITGB1-201ENST00000302278 PIK3CD-AS1Q5SR53 167 aa4.2□□□□□ -1.74
ITGB1-201ENST00000302278 SH3BGRL3Q9H299 93 aa4.2□□□□□ -1.74
ITGB1-201ENST00000302278 NIT2Q9NQR4 276 aa4.2□□□□□ -1.74
ITGB1-201ENST00000302278 LRP2P98164 4655 aa4.2□□□□□ -1.74
ITGB1-201ENST00000302278 RAB19A4D1S5 217 aa4.19□□□□□ -1.74
ITGB1-201ENST00000302278 GPX1P07203 203 aa4.19□□□□□ -1.74
ITGB1-201ENST00000302278 ZNF138P52744 262 aa4.19□□□□□ -1.74
ITGB1-201ENST00000302278 ATP6V0E2Q8NHE4 81 aa4.19□□□□□ -1.74
ITGB1-201ENST00000302278 THAP6Q8TBB0 222 aa4.19□□□□□ -1.74
ITGB1-201ENST00000302278 SEC22CQ9BRL7 303 aa4.19□□□□□ -1.74
ITGB1-201ENST00000302278 V9GYH0 126 aa4.19□□□□□ -1.74
ITGB1-201ENST00000302278 IGHV3-16A0A0C4DH30 117 aa4.19□□□□□ -1.74
ITGB1-201ENST00000302278 H3BP45 60 aa4.19□□□□□ -1.74
ITGB1-201ENST00000302278 TCRBP04435 133 aa4.19□□□□□ -1.74
ITGB1-201ENST00000302278 ALKAL2Q6UX46 152 aa4.19□□□□□ -1.74
ITGB1-201ENST00000302278 Q6ZQT7 251 aa4.19□□□□□ -1.74
ITGB1-201ENST00000302278 GTSF1LQ9H1H1 148 aa4.19□□□□□ -1.74
ITGB1-201ENST00000302278 GOSR2O14653 212 aa4.19□□□□□ -1.74
ITGB1-201ENST00000302278 ARPC5O15511 151 aa4.19□□□□□ -1.74
ITGB1-201ENST00000302278 RAB2AP61019 212 aa4.19□□□□□ -1.74
ITGB1-201ENST00000302278 FAM167A-AS1Q96KT0 104 aa4.19□□□□□ -1.74
ITGB1-201ENST00000302278 CHCHD7Q9BUK0 85 aa4.19□□□□□ -1.74
ITGB1-201ENST00000302278 NKX6-2Q9C056 277 aaPredicted RBP4.19□□□□□ -1.74
ITGB1-201ENST00000302278 TREM1Q9NP99 234 aa4.19□□□□□ -1.74
ITGB1-201ENST00000302278 LOC100131303A0A0U1RQF7 123 aa4.18□□□□□ -1.74
ITGB1-201ENST00000302278 SMCO3A2RU48 225 aa4.18□□□□□ -1.74
ITGB1-201ENST00000302278 M0R3E3 92 aa4.18□□□□□ -1.74
ITGB1-201ENST00000302278 PLA2G10O15496 165 aa4.18□□□□□ -1.74
ITGB1-201ENST00000302278 GATCO43716 136 aaKnown RBP4.18□□□□□ -1.74
ITGB1-201ENST00000302278 SNAPINO95295 136 aa4.18□□□□□ -1.74
ITGB1-201ENST00000302278 S100A2P29034 98 aa4.18□□□□□ -1.74
ITGB1-201ENST00000302278 S100A11P31949 105 aa4.18□□□□□ -1.74
ITGB1-201ENST00000302278 TMEM78Q5T7P6 136 aa4.18□□□□□ -1.74
ITGB1-201ENST00000302278 SLC25A2Q9BXI2 301 aa4.18□□□□□ -1.74
ITGB1-201ENST00000302278 C9orf170A2RU37 121 aa4.18□□□□□ -1.74
ITGB1-201ENST00000302278 SFTA3P0C7M3 94 aa4.18□□□□□ -1.74
ITGB1-201ENST00000302278 BLOC1S1P78537 153 aa4.18□□□□□ -1.74
ITGB1-201ENST00000302278 RHOHQ15669 191 aa4.18□□□□□ -1.74
ITGB1-201ENST00000302278 TRAV8-1A0A0A6YYK1 113 aa4.17□□□□□ -1.74
ITGB1-201ENST00000302278 NAP1L6A6NFF2 107 aa4.17□□□□□ -1.74
ITGB1-201ENST00000302278 E5RGE8 158 aa4.17□□□□□ -1.74
ITGB1-201ENST00000302278 SSSCA1O60232 199 aa4.17□□□□□ -1.74
ITGB1-201ENST00000302278 SEC11BP0C7V7 166 aa4.17□□□□□ -1.74
ITGB1-201ENST00000302278 METTL15P1P0C7V9 234 aa4.17□□□□□ -1.74
ITGB1-201ENST00000302278 RMI2Q96E14 147 aa4.17□□□□□ -1.74
ITGB1-201ENST00000302278 SDHCQ99643 169 aaPredicted RBP4.17□□□□□ -1.74
ITGB1-201ENST00000302278 SLC39A9Q9NUM3 307 aa4.17□□□□□ -1.74
ITGB1-201ENST00000302278 J3KRW8 73 aa4.17□□□□□ -1.74
ITGB1-201ENST00000302278 PPT1P50897 306 aa4.17□□□□□ -1.74
ITGB1-201ENST00000302278 UFSP1Q6NVU6 142 aa4.17□□□□□ -1.74
ITGB1-201ENST00000302278 Q6ZRG5 221 aa4.17□□□□□ -1.74
ITGB1-201ENST00000302278 SLC25A29Q8N8R3 303 aa4.17□□□□□ -1.74
ITGB1-201ENST00000302278 STOML3Q8TAV4 291 aa4.17□□□□□ -1.74
ITGB1-201ENST00000302278 ZNF471Q9BX82 626 aaPredicted RBP4.17□□□□□ -1.74
ITGB1-201ENST00000302278 FBLL1A6NHQ2 334 aaKnown RBP4.17□□□□□ -1.74
ITGB1-201ENST00000302278 H3BTX0 84 aa4.17□□□□□ -1.74
ITGB1-201ENST00000302278 SMIM6P0DI80 62 aa4.17□□□□□ -1.74
ITGB1-201ENST00000302278 PRB4P10163 310 aaPredicted RBP4.17□□□□□ -1.74
ITGB1-201ENST00000302278 CAMLGP49069 296 aa4.17□□□□□ -1.74
ITGB1-201ENST00000302278 OR4C5Q8NGB2 326 aa4.17□□□□□ -1.74
ITGB1-201ENST00000302278 C9orf85Q96MD7 179 aa4.17□□□□□ -1.74
ITGB1-201ENST00000302278 C14orf177Q52M58 125 aa4.16□□□□□ -1.74
ITGB1-201ENST00000302278 CFAP126Q5VTH2 177 aa4.16□□□□□ -1.74
ITGB1-201ENST00000302278 ZFP2Q6ZN57 461 aa4.16□□□□□ -1.74
ITGB1-201ENST00000302278 INO80EQ8NBZ0 244 aaPredicted RBP4.16□□□□□ -1.74
ITGB1-201ENST00000302278 FXYD5Q96DB9 178 aa4.16□□□□□ -1.74
ITGB1-201ENST00000302278 AAMDCQ9H7C9 122 aa4.16□□□□□ -1.74
ITGB1-201ENST00000302278 IGKV2-40A0A087WW87 121 aaPredicted RBP4.16□□□□□ -1.74
ITGB1-201ENST00000302278 IGKV2D-40P01614 121 aaPredicted RBP4.16□□□□□ -1.74
ITGB1-201ENST00000302278 GIPP09681 153 aaPredicted RBP4.16□□□□□ -1.74
ITGB1-201ENST00000302278 EIF5AP63241 154 aaKnown RBP4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms