RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 IGLV2-23P01705 113 aa11.17□□□□□ -0.62
CDT1-201ENST00000301019 RNF125Q96EQ8 232 aa11.17□□□□□ -0.62
CDT1-201ENST00000301019 DUX3Q96PT4 197 aa11.17□□□□□ -0.62
CDT1-201ENST00000301019 TMEM170BQ5T4T1 132 aa11.17□□□□□ -0.62
CDT1-201ENST00000301019 SPANXN1Q5VSR9 72 aa11.17□□□□□ -0.62
CDT1-201ENST00000301019 RNF7Q9UBF6 113 aa11.17□□□□□ -0.62
CDT1-201ENST00000301019 ADARB2-AS1A8MUL3 147 aa11.16□□□□□ -0.62
CDT1-201ENST00000301019 RS1O15537 224 aa11.16□□□□□ -0.62
CDT1-201ENST00000301019 MGPP08493 103 aa11.16□□□□□ -0.62
CDT1-201ENST00000301019 GLRXP35754 106 aa11.16□□□□□ -0.62
CDT1-201ENST00000301019 IL17RELQ6ZVW7 336 aa11.16□□□□□ -0.62
CDT1-201ENST00000301019 NDUFA11Q86Y39 141 aa11.16□□□□□ -0.62
CDT1-201ENST00000301019 CFHR4Q92496 578 aa11.16□□□□□ -0.62
CDT1-201ENST00000301019 RPL39LQ96EH5 51 aaKnown RBP11.16□□□□□ -0.62
CDT1-201ENST00000301019 TNFRSF18Q9Y5U5 241 aa11.16□□□□□ -0.62
CDT1-201ENST00000301019 TRAV2A0A0B4J234 112 aa11.16□□□□□ -0.62
CDT1-201ENST00000301019 CRYGCP07315 174 aa11.16□□□□□ -0.62
CDT1-201ENST00000301019 Q8N1Y9 231 aa11.16□□□□□ -0.62
CDT1-201ENST00000301019 ZFHX3Q15911 3703 aa11.16□□□□□ -0.62
CDT1-201ENST00000301019 TMEM200BQ69YZ2 307 aa11.16□□□□□ -0.62
CDT1-201ENST00000301019 LYPD2Q6UXB3 125 aa11.16□□□□□ -0.62
CDT1-201ENST00000301019 C9orf106Q8NAJ2 232 aa11.16□□□□□ -0.62
CDT1-201ENST00000301019 CELSR1Q9NYQ6 3014 aa11.16□□□□□ -0.62
CDT1-201ENST00000301019 IGKV3-15P01624 115 aa11.15□□□□□ -0.62
CDT1-201ENST00000301019 CFC1BP0CG36 223 aa11.15□□□□□ -0.62
CDT1-201ENST00000301019 CFC1P0CG37 223 aa11.15□□□□□ -0.62
CDT1-201ENST00000301019 F8VRH5 84 aa11.15□□□□□ -0.62
CDT1-201ENST00000301019 SRSF1Q07955 248 aaKnown RBP eCLIP11.15□□□□□ -0.62
CDT1-201ENST00000301019 Q6ZT83 130 aa11.15□□□□□ -0.62
CDT1-201ENST00000301019 OOSP1A8MZH6 123 aa11.14□□□□□ -0.63
CDT1-201ENST00000301019 H7C1H1 209 aa11.14□□□□□ -0.63
CDT1-201ENST00000301019 LINC00694P0DN24 101 aa11.14□□□□□ -0.63
CDT1-201ENST00000301019 ZNF833PQ6ZTB9 187 aa11.14□□□□□ -0.63
CDT1-201ENST00000301019 C14orf178Q8N769 122 aaPredicted RBP11.14□□□□□ -0.63
CDT1-201ENST00000301019 TRAV8-4A0A0B4J246 113 aa11.14□□□□□ -0.63
CDT1-201ENST00000301019 DEFB1P60022 68 aa11.14□□□□□ -0.63
CDT1-201ENST00000301019 FOXC1Q12948 553 aa11.14□□□□□ -0.63
CDT1-201ENST00000301019 Q8N8P6 123 aa11.14□□□□□ -0.63
CDT1-201ENST00000301019 ATP6V0E2Q8NHE4 81 aa11.14□□□□□ -0.63
CDT1-201ENST00000301019 SHANK2-AS3Q9BTD1 123 aa11.14□□□□□ -0.63
CDT1-201ENST00000301019 ACACAQ13085 2346 aa11.14□□□□□ -0.63
CDT1-201ENST00000301019 Q6ZSV7 163 aa11.13□□□□□ -0.63
CDT1-201ENST00000301019 ZNF491Q8N8L2 437 aa11.13□□□□□ -0.63
CDT1-201ENST00000301019 PLNP26678 52 aa11.13□□□□□ -0.63
CDT1-201ENST00000301019 TAL2Q16559 108 aa11.13□□□□□ -0.63
CDT1-201ENST00000301019 DYNAPQ8N1N2 210 aa11.13□□□□□ -0.63
CDT1-201ENST00000301019 RASL10AQ92737 203 aa11.13□□□□□ -0.63
CDT1-201ENST00000301019 C11orf21Q9P2W6 132 aa11.13□□□□□ -0.63
CDT1-201ENST00000301019 C22orf34Q6ZV56 151 aa11.12□□□□□ -0.63
CDT1-201ENST00000301019 FAM57AQ8TBR7 257 aa11.12□□□□□ -0.63
CDT1-201ENST00000301019 MRPS12O15235 138 aaKnown RBP11.12□□□□□ -0.63
CDT1-201ENST00000301019 FCN3O75636 299 aa11.12□□□□□ -0.63
CDT1-201ENST00000301019 PRSS2P07478 247 aa11.12□□□□□ -0.63
CDT1-201ENST00000301019 C21orf62Q9NYP8 219 aa11.12□□□□□ -0.63
CDT1-201ENST00000301019 IGKV3-7A0A075B6H7 116 aa11.11□□□□□ -0.63
CDT1-201ENST00000301019 SRD5A1P18405 259 aa11.11□□□□□ -0.63
CDT1-201ENST00000301019 ATP5IP56385 69 aaPredicted RBP11.11□□□□□ -0.63
CDT1-201ENST00000301019 A4D1N5 150 aa11.11□□□□□ -0.63
CDT1-201ENST00000301019 CD7P09564 240 aa11.11□□□□□ -0.63
CDT1-201ENST00000301019 UBE2D3P61077 147 aa11.11□□□□□ -0.63
CDT1-201ENST00000301019 HERVK_113P61574 105 aa11.11□□□□□ -0.63
CDT1-201ENST00000301019 UBE2D2P62837 147 aa11.11□□□□□ -0.63
CDT1-201ENST00000301019 MRGPRG-AS1Q2M3A8 158 aa11.11□□□□□ -0.63
CDT1-201ENST00000301019 CEMP1Q6PRD7 247 aaPredicted RBP11.11□□□□□ -0.63
CDT1-201ENST00000301019 RAI1Q7Z5J4 1906 aaPredicted RBP11.11□□□□□ -0.63
CDT1-201ENST00000301019 NACAE9PAV3 2078 aa11.11□□□□□ -0.63
CDT1-201ENST00000301019 AKAP13Q12802 2813 aa11.11□□□□□ -0.63
CDT1-201ENST00000301019 TSPEAR-AS2P59090 65 aa11.11□□□□□ -0.63
CDT1-201ENST00000301019 ZNF575Q86XF7 245 aa11.11□□□□□ -0.63
CDT1-201ENST00000301019 PTPRQQ9UMZ3 2332 aa11.1□□□□□ -0.63
CDT1-201ENST00000301019 IGHV1-46P01743 117 aa11.1□□□□□ -0.63
CDT1-201ENST00000301019 HES1Q14469 280 aa11.1□□□□□ -0.63
CDT1-201ENST00000301019 ADIPOQQ15848 244 aa11.1□□□□□ -0.63
CDT1-201ENST00000301019 ODF3Q96PU9 254 aa11.1□□□□□ -0.63
CDT1-201ENST00000301019 UBTD1Q9HAC8 227 aa11.1□□□□□ -0.63
CDT1-201ENST00000301019 TRAV12-3A0A0B4J271 114 aa11.1□□□□□ -0.63
CDT1-201ENST00000301019 DUSP14O95147 198 aaKnown RBP11.1□□□□□ -0.63
CDT1-201ENST00000301019 HOXB4P17483 251 aaPredicted RBP11.1□□□□□ -0.63
CDT1-201ENST00000301019 IGF2-ASQ6U949 168 aa11.1□□□□□ -0.63
CDT1-201ENST00000301019 C11orf86A6NJI1 115 aa11.09□□□□□ -0.63
CDT1-201ENST00000301019 IGLC6P0CF74 106 aa11.09□□□□□ -0.63
CDT1-201ENST00000301019 ZNF22P17026 224 aaPredicted RBP11.09□□□□□ -0.63
CDT1-201ENST00000301019 UBE2D1P51668 147 aa11.09□□□□□ -0.63
CDT1-201ENST00000301019 RPL39P62891 51 aaKnown RBP11.09□□□□□ -0.63
CDT1-201ENST00000301019 C2orf66Q6UXQ4 117 aa11.09□□□□□ -0.63
CDT1-201ENST00000301019 OPRPNQ99935 248 aaPredicted RBP11.09□□□□□ -0.63
CDT1-201ENST00000301019 SIGLEC9Q9Y336 463 aa11.09□□□□□ -0.63
CDT1-201ENST00000301019 IGKV3D-20A0A0C4DH25 116 aa11.09□□□□□ -0.63
CDT1-201ENST00000301019 H3BRN7 92 aa11.09□□□□□ -0.63
CDT1-201ENST00000301019 PRO1854Q9UHT4 67 aa11.09□□□□□ -0.63
CDT1-201ENST00000301019 FAM236AA0A1B0GUQ0 79 aa11.09□□□□□ -0.63
CDT1-201ENST00000301019 FAM236BA0A1B0GV22 79 aa11.09□□□□□ -0.63
CDT1-201ENST00000301019 EEF1AKMT3Q96AZ1 226 aa11.09□□□□□ -0.63
CDT1-201ENST00000301019 ZNF580Q9UK33 172 aa11.09□□□□□ -0.63
CDT1-201ENST00000301019 IGLV2-18A0A075B6J9 118 aa11.08□□□□□ -0.64
CDT1-201ENST00000301019 LHBP01229 141 aa11.08□□□□□ -0.64
CDT1-201ENST00000301019 IGF1P05019 195 aa11.08□□□□□ -0.64
CDT1-201ENST00000301019 MZT1Q08AG7 82 aa11.08□□□□□ -0.64
CDT1-201ENST00000301019 C10orf126Q8N4M7 172 aa11.08□□□□□ -0.64
CDT1-201ENST00000301019 GATD1Q8NB37 220 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms