RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 A0A1W2PPM0 123 aa16.79■□□□□ 0.28
TPM4-201ENST00000300933 SMKR1H3BMG3 65 aa16.78■□□□□ 0.28
TPM4-201ENST00000300933 DEFB1P60022 68 aa16.78■□□□□ 0.28
TPM4-201ENST00000300933 RPL24P83731 157 aaKnown RBP16.78■□□□□ 0.28
TPM4-201ENST00000300933 DEFB112Q30KQ8 113 aa16.78■□□□□ 0.28
TPM4-201ENST00000300933 C10orf99Q6UWK7 81 aa16.78■□□□□ 0.28
TPM4-201ENST00000300933 NEGR1Q7Z3B1 354 aa16.78■□□□□ 0.28
TPM4-201ENST00000300933 TMEM189A5PLL7 270 aa16.78■□□□□ 0.28
TPM4-201ENST00000300933 LYZL1Q6UWQ5 148 aa16.78■□□□□ 0.28
TPM4-201ENST00000300933 PPIFP30405 207 aaKnown RBP16.77■□□□□ 0.28
TPM4-201ENST00000300933 KLK9Q2XQG4 91 aa16.77■□□□□ 0.28
TPM4-201ENST00000300933 LGALS9BQ3B8N2 356 aa16.77■□□□□ 0.28
TPM4-201ENST00000300933 LGALS9CQ6DKI2 356 aa16.77■□□□□ 0.28
TPM4-201ENST00000300933 Q6ZQT7 251 aa16.77■□□□□ 0.28
TPM4-201ENST00000300933 KLK9Q9UKQ9 250 aa16.77■□□□□ 0.28
TPM4-201ENST00000300933 PRRC2AP48634 2157 aaKnown RBP16.77■□□□□ 0.28
TPM4-201ENST00000300933 IGHG2P01859 326 aa16.77■□□□□ 0.27
TPM4-201ENST00000300933 IL17RELQ6ZVW7 336 aa16.77■□□□□ 0.27
TPM4-201ENST00000300933 C18orf15Q96N68 181 aa16.77■□□□□ 0.27
TPM4-201ENST00000300933 NPFFR1Q9GZQ6 430 aa16.77■□□□□ 0.27
TPM4-201ENST00000300933 DKK2Q9UBU2 259 aa16.77■□□□□ 0.27
TPM4-201ENST00000300933 TENM4Q6N022 2769 aa16.77■□□□□ 0.27
TPM4-201ENST00000300933 TTTY13Q9BZ97 58 aa16.76■□□□□ 0.27
TPM4-201ENST00000300933 CUBNO60494 3623 aa16.76■□□□□ 0.27
TPM4-201ENST00000300933 TRAV8-2A0A0B4J237 113 aa16.76■□□□□ 0.27
TPM4-201ENST00000300933 FBLL1A6NHQ2 334 aaKnown RBP16.76■□□□□ 0.27
TPM4-201ENST00000300933 OR9G4Q8NGQ1 327 aa16.76■□□□□ 0.27
TPM4-201ENST00000300933 IGF1P05019 195 aa16.75■□□□□ 0.27
TPM4-201ENST00000300933 C8orf86Q6ZUL3 223 aa16.75■□□□□ 0.27
TPM4-201ENST00000300933 DPF1Q92782 380 aa16.75■□□□□ 0.27
TPM4-201ENST00000300933 ORM1P02763 201 aa16.75■□□□□ 0.27
TPM4-201ENST00000300933 EDN2P20800 178 aa16.75■□□□□ 0.27
TPM4-201ENST00000300933 IFI27L1Q96BM0 104 aa16.75■□□□□ 0.27
TPM4-201ENST00000300933 GCSHP23434 173 aa16.74■□□□□ 0.27
TPM4-201ENST00000300933 FAM223BA6NKX1 122 aa16.74■□□□□ 0.27
TPM4-201ENST00000300933 HBDP02042 147 aa16.74■□□□□ 0.27
TPM4-201ENST00000300933 FABP2P12104 132 aa16.74■□□□□ 0.27
TPM4-201ENST00000300933 FAM223AQ8IWN6 122 aa16.74■□□□□ 0.27
TPM4-201ENST00000300933 ORMDL3Q8N138 153 aa16.74■□□□□ 0.27
TPM4-201ENST00000300933 J3KRW8 73 aa16.73■□□□□ 0.27
TPM4-201ENST00000300933 RPL11P62913 178 aaKnown RBP16.73■□□□□ 0.27
TPM4-201ENST00000300933 OR4X2Q8NGF9 303 aa16.73■□□□□ 0.27
TPM4-201ENST00000300933 SORL1Q92673 2214 aa16.73■□□□□ 0.27
TPM4-201ENST00000300933 K7EMI3 77 aa16.73■□□□□ 0.27
TPM4-201ENST00000300933 SAMD5Q5TGI4 173 aa16.73■□□□□ 0.27
TPM4-201ENST00000300933 ZNF575Q86XF7 245 aa16.73■□□□□ 0.27
TPM4-201ENST00000300933 LINC01356Q8N9X3 169 aa16.73■□□□□ 0.27
TPM4-201ENST00000300933 AGPAT4-IT1Q9H0P7 198 aa16.73■□□□□ 0.27
TPM4-201ENST00000300933 K7ERJ3 54 aa16.73■□□□□ 0.27
TPM4-201ENST00000300933 SRD5A1P18405 259 aa16.73■□□□□ 0.27
TPM4-201ENST00000300933 MRPL51Q4U2R6 128 aaKnown RBP16.73■□□□□ 0.27
TPM4-201ENST00000300933 FAM104BQ5XKR9 115 aa16.73■□□□□ 0.27
TPM4-201ENST00000300933 A0A096LNT2 108 aa16.72■□□□□ 0.27
TPM4-201ENST00000300933 OR5A1Q8NGJ0 315 aa16.72■□□□□ 0.27
TPM4-201ENST00000300933 TEX48A0A1B0GUV7 120 aa16.72■□□□□ 0.27
TPM4-201ENST00000300933 A0A1B0GW15 77 aa16.72■□□□□ 0.27
TPM4-201ENST00000300933 GATD1Q8NB37 220 aa16.72■□□□□ 0.27
TPM4-201ENST00000300933 MSRB1Q9NZV6 116 aa16.72■□□□□ 0.27
TPM4-201ENST00000300933 NPYP01303 97 aa16.71■□□□□ 0.27
TPM4-201ENST00000300933 C16orf92Q96LL3 132 aa16.71■□□□□ 0.27
TPM4-201ENST00000300933 CKS2P33552 79 aa16.71■□□□□ 0.26
TPM4-201ENST00000300933 CRIP2P52943 208 aaPredicted RBP16.71■□□□□ 0.26
TPM4-201ENST00000300933 FXYD2P54710 66 aa16.71■□□□□ 0.26
TPM4-201ENST00000300933 HIST2H2BCQ6DN03 193 aa16.71■□□□□ 0.26
TPM4-201ENST00000300933 ZNF493Q6ZR52 646 aa16.71■□□□□ 0.26
TPM4-201ENST00000300933 NF1P21359 2839 aa16.7■□□□□ 0.26
TPM4-201ENST00000300933 SMIM13P0DJ93 91 aa16.7■□□□□ 0.26
TPM4-201ENST00000300933 SLC25A16P16260 332 aa16.7■□□□□ 0.26
TPM4-201ENST00000300933 C20orf173Q96LM9 149 aa16.7■□□□□ 0.26
TPM4-201ENST00000300933 DUX5Q96PT3 197 aa16.7■□□□□ 0.26
TPM4-201ENST00000300933 U3KQE9 123 aa16.7■□□□□ 0.26
TPM4-201ENST00000300933 IGKV2D-26A0A0A0MRZ7 120 aa16.7■□□□□ 0.26
TPM4-201ENST00000300933 SIVA1O15304 175 aa16.7■□□□□ 0.26
TPM4-201ENST00000300933 RAB9AP51151 201 aa16.7■□□□□ 0.26
TPM4-201ENST00000300933 SAMD13Q5VXD3 122 aa16.7■□□□□ 0.26
TPM4-201ENST00000300933 DSCR9P59020 149 aa16.69■□□□□ 0.26
TPM4-201ENST00000300933 GTSF1LQ9H1H1 148 aa16.69■□□□□ 0.26
TPM4-201ENST00000300933 CIDEAO60543 219 aa16.69■□□□□ 0.26
TPM4-201ENST00000300933 Q6AWC8 147 aa16.69■□□□□ 0.26
TPM4-201ENST00000300933 TWIST1Q15672 202 aa16.68■□□□□ 0.26
TPM4-201ENST00000300933 ITPR3Q14573 2671 aa16.68■□□□□ 0.26
TPM4-201ENST00000300933 SETD2Q9BYW2 2564 aaPredicted RBP16.68■□□□□ 0.26
TPM4-201ENST00000300933 SLC50A1Q9BRV3 221 aa16.68■□□□□ 0.26
TPM4-201ENST00000300933 C11orf21Q9P2W6 132 aa16.68■□□□□ 0.26
TPM4-201ENST00000300933 U3KQK5 164 aa16.68■□□□□ 0.26
TPM4-201ENST00000300933 GLMPQ8WWB7 406 aa16.67■□□□□ 0.26
TPM4-201ENST00000300933 GPHB5Q86YW7 130 aa16.67■□□□□ 0.26
TPM4-201ENST00000300933 CHTOPQ9Y3Y2 248 aaKnown RBP16.67■□□□□ 0.26
TPM4-201ENST00000300933 ACANP16112 2415 aa16.67■□□□□ 0.26
TPM4-201ENST00000300933 FABP5P3A8MUU1 101 aa16.66■□□□□ 0.26
TPM4-201ENST00000300933 GAS8-AS1O95177 125 aa16.66■□□□□ 0.26
TPM4-201ENST00000300933 SMAGPQ0VAQ4 97 aa16.66■□□□□ 0.26
TPM4-201ENST00000300933 CR1P17927 2039 aa16.66■□□□□ 0.26
TPM4-201ENST00000300933 F6UB75 175 aa16.65■□□□□ 0.26
TPM4-201ENST00000300933 BMI1P35226 326 aa16.65■□□□□ 0.26
TPM4-201ENST00000300933 IGLV1-40P01703 118 aa16.65■□□□□ 0.26
TPM4-201ENST00000300933 AZU1P20160 251 aa16.65■□□□□ 0.26
TPM4-201ENST00000300933 TMEM78Q5T7P6 136 aa16.65■□□□□ 0.26
TPM4-201ENST00000300933 BEX4Q9NWD9 120 aaPredicted RBP16.65■□□□□ 0.26
TPM4-201ENST00000300933 SPRY2O43597 315 aa16.64■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms