RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 TEN1Q86WV5 123 aa10.01□□□□□ -0.81
TVP23A-201ENST00000299866 RNF5Q99942 180 aa10.01□□□□□ -0.81
TVP23A-201ENST00000299866 IGHV7-4-1A0A0J9YVY3 117 aa10□□□□□ -0.81
TVP23A-201ENST00000299866 FAM90A27PA6NNH2 459 aa10□□□□□ -0.81
TVP23A-201ENST00000299866 LINC01619G3V211 115 aa10□□□□□ -0.81
TVP23A-201ENST00000299866 M0R381 172 aa10□□□□□ -0.81
TVP23A-201ENST00000299866 C5orf64Q2M2E5 130 aa10□□□□□ -0.81
TVP23A-201ENST00000299866 NEXN-AS1Q8NBZ9 246 aa10□□□□□ -0.81
TVP23A-201ENST00000299866 RPL39LQ96EH5 51 aaKnown RBP10□□□□□ -0.81
TVP23A-201ENST00000299866 EP300Q09472 2414 aaPredicted RBP10□□□□□ -0.81
TVP23A-201ENST00000299866 MED13LQ71F56 2210 aa10□□□□□ -0.81
TVP23A-201ENST00000299866 A8MWV9 139 aa10□□□□□ -0.81
TVP23A-201ENST00000299866 LY6LH3BQJ8 138 aa10□□□□□ -0.81
TVP23A-201ENST00000299866 UBE2D1P51668 147 aa9.99□□□□□ -0.81
TVP23A-201ENST00000299866 BAALCQ8WXS3 180 aa9.99□□□□□ -0.81
TVP23A-201ENST00000299866 B5MCH6 92 aa9.99□□□□□ -0.81
TVP23A-201ENST00000299866 ZFAND6Q6FIF0 208 aa9.99□□□□□ -0.81
TVP23A-201ENST00000299866 C2orf66Q6UXQ4 117 aa9.99□□□□□ -0.81
TVP23A-201ENST00000299866 RASL10AQ92737 203 aa9.99□□□□□ -0.81
TVP23A-201ENST00000299866 DPM3Q9P2X0 92 aa9.99□□□□□ -0.81
TVP23A-201ENST00000299866 E7EQL1 145 aa9.98□□□□□ -0.81
TVP23A-201ENST00000299866 ZNF688P0C7X2 276 aa9.98□□□□□ -0.81
TVP23A-201ENST00000299866 PRTN3P24158 256 aa9.98□□□□□ -0.81
TVP23A-201ENST00000299866 ZNF672Q499Z4 452 aaPredicted RBP9.98□□□□□ -0.81
TVP23A-201ENST00000299866 ORMDL2Q53FV1 153 aa9.98□□□□□ -0.81
TVP23A-201ENST00000299866 Q6ZS92 163 aa9.98□□□□□ -0.81
TVP23A-201ENST00000299866 ANKRD29Q8N6D5 301 aa9.98□□□□□ -0.81
TVP23A-201ENST00000299866 APC2O95996 2303 aa9.98□□□□□ -0.81
TVP23A-201ENST00000299866 LAMA5O15230 3695 aa9.98□□□□□ -0.81
TVP23A-201ENST00000299866 A0A0G2JNJ9 132 aa9.98□□□□□ -0.81
TVP23A-201ENST00000299866 MGPP08493 103 aa9.98□□□□□ -0.81
TVP23A-201ENST00000299866 UBE2D3P61077 147 aa9.98□□□□□ -0.81
TVP23A-201ENST00000299866 UBE2D2P62837 147 aa9.98□□□□□ -0.81
TVP23A-201ENST00000299866 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.98□□□□□ -0.81
TVP23A-201ENST00000299866 TEX29Q8N6K0 151 aa9.98□□□□□ -0.81
TVP23A-201ENST00000299866 TOMM6Q96B49 74 aa9.98□□□□□ -0.81
TVP23A-201ENST00000299866 Q9UFV3 132 aa9.98□□□□□ -0.81
TVP23A-201ENST00000299866 SUMO2P61956 95 aaKnown RBP9.98□□□□□ -0.81
TVP23A-201ENST00000299866 NDUFA11Q86Y39 141 aa9.98□□□□□ -0.81
TVP23A-201ENST00000299866 LYRM7Q5U5X0 104 aa9.97□□□□□ -0.81
TVP23A-201ENST00000299866 C14orf178Q8N769 122 aaPredicted RBP9.97□□□□□ -0.81
TVP23A-201ENST00000299866 ABCA4P78363 2273 aa9.97□□□□□ -0.81
TVP23A-201ENST00000299866 H7C2G1 150 aa9.97□□□□□ -0.81
TVP23A-201ENST00000299866 SCGB2A1O75556 95 aa9.97□□□□□ -0.81
TVP23A-201ENST00000299866 CD7P09564 240 aa9.97□□□□□ -0.81
TVP23A-201ENST00000299866 OR11H6Q8NGC7 330 aa9.97□□□□□ -0.81
TVP23A-201ENST00000299866 ARL3P36405 182 aa9.96□□□□□ -0.81
TVP23A-201ENST00000299866 MSRB2Q9Y3D2 182 aa9.96□□□□□ -0.81
TVP23A-201ENST00000299866 DMXL1Q9Y485 3027 aa9.96□□□□□ -0.81
TVP23A-201ENST00000299866 GAGE5Q13069 117 aa9.96□□□□□ -0.82
TVP23A-201ENST00000299866 GAGE6Q13070 117 aa9.96□□□□□ -0.82
TVP23A-201ENST00000299866 Q6ZS46 218 aa9.96□□□□□ -0.82
TVP23A-201ENST00000299866 SLC50A1Q9BRV3 221 aa9.96□□□□□ -0.82
TVP23A-201ENST00000299866 BUB3O43684 328 aa9.95□□□□□ -0.82
TVP23A-201ENST00000299866 IGF1P05019 195 aa9.95□□□□□ -0.82
TVP23A-201ENST00000299866 CLEC3BP05452 202 aa9.95□□□□□ -0.82
TVP23A-201ENST00000299866 NPBQ8NG41 125 aa9.95□□□□□ -0.82
TVP23A-201ENST00000299866 RAX2Q96IS3 184 aa9.95□□□□□ -0.82
TVP23A-201ENST00000299866 CFC1BP0CG36 223 aa9.95□□□□□ -0.82
TVP23A-201ENST00000299866 CFC1P0CG37 223 aa9.95□□□□□ -0.82
TVP23A-201ENST00000299866 S100A4P26447 101 aaKnown RBP9.95□□□□□ -0.82
TVP23A-201ENST00000299866 FAM57AQ8TBR7 257 aa9.95□□□□□ -0.82
TVP23A-201ENST00000299866 TRAV8-2A0A0B4J237 113 aa9.95□□□□□ -0.82
TVP23A-201ENST00000299866 DUSP14O95147 198 aaKnown RBP9.95□□□□□ -0.82
TVP23A-201ENST00000299866 COLQQ9Y215 455 aaPredicted RBP9.95□□□□□ -0.82
TVP23A-201ENST00000299866 TRBV20-1A0A075B6N2 111 aa9.94□□□□□ -0.82
TVP23A-201ENST00000299866 C11orf86A6NJI1 115 aa9.94□□□□□ -0.82
TVP23A-201ENST00000299866 C9JAW5 83 aa9.94□□□□□ -0.82
TVP23A-201ENST00000299866 LY6HO94772 140 aa9.94□□□□□ -0.82
TVP23A-201ENST00000299866 COX6B1P14854 86 aa9.94□□□□□ -0.82
TVP23A-201ENST00000299866 PRR9Q5T870 116 aa9.94□□□□□ -0.82
TVP23A-201ENST00000299866 A0A0J9YY99 117 aa9.94□□□□□ -0.82
TVP23A-201ENST00000299866 ECSCRQ19T08 205 aa9.94□□□□□ -0.82
TVP23A-201ENST00000299866 C15orf32Q32M92 178 aa9.94□□□□□ -0.82
TVP23A-201ENST00000299866 RBAKDNA6NC62 111 aa9.94□□□□□ -0.82
TVP23A-201ENST00000299866 PLA2G2CQ5R387 149 aa9.94□□□□□ -0.82
TVP23A-201ENST00000299866 CRIP2P52943 208 aaPredicted RBP9.93□□□□□ -0.82
TVP23A-201ENST00000299866 TMEM170BQ5T4T1 132 aa9.93□□□□□ -0.82
TVP23A-201ENST00000299866 TRPT1Q86TN4 253 aaKnown RBP9.93□□□□□ -0.82
TVP23A-201ENST00000299866 CLEC19AQ6UXS0 136 aa9.93□□□□□ -0.82
TVP23A-201ENST00000299866 VCX2Q9H322 139 aa9.93□□□□□ -0.82
TVP23A-201ENST00000299866 SLC25A20O43772 301 aa9.92□□□□□ -0.82
TVP23A-201ENST00000299866 C10orf126Q8N4M7 172 aa9.92□□□□□ -0.82
TVP23A-201ENST00000299866 DEFB124Q8NES8 71 aa9.92□□□□□ -0.82
TVP23A-201ENST00000299866 PHLDA3Q9Y5J5 127 aa9.92□□□□□ -0.82
TVP23A-201ENST00000299866 TMEM262E9PQX1 116 aa9.92□□□□□ -0.82
TVP23A-201ENST00000299866 DEFB1P60022 68 aa9.92□□□□□ -0.82
TVP23A-201ENST00000299866 HERVK_113P61574 105 aa9.92□□□□□ -0.82
TVP23A-201ENST00000299866 AJUBAQ96IF1 538 aa9.92□□□□□ -0.82
TVP23A-201ENST00000299866 PRO1854Q9UHT4 67 aa9.92□□□□□ -0.82
TVP23A-201ENST00000299866 CRYGDP07320 174 aa9.91□□□□□ -0.82
TVP23A-201ENST00000299866 TSPEAR-AS2P59090 65 aa9.91□□□□□ -0.82
TVP23A-201ENST00000299866 GAGE2BQ13066 116 aa9.91□□□□□ -0.82
TVP23A-201ENST00000299866 GAGE2EQ4V326 116 aa9.91□□□□□ -0.82
TVP23A-201ENST00000299866 ZFAND3Q9H8U3 227 aa9.91□□□□□ -0.82
TVP23A-201ENST00000299866 GAGE2DQ9UEU5 116 aa9.91□□□□□ -0.82
TVP23A-201ENST00000299866 PIEZO2Q9H5I5 2752 aa9.91□□□□□ -0.82
TVP23A-201ENST00000299866 CUL9Q8IWT3 2517 aa9.91□□□□□ -0.82
TVP23A-201ENST00000299866 IGHV4-4A0A075B6R2 117 aa9.91□□□□□ -0.82
TVP23A-201ENST00000299866 C16orf92Q96LL3 132 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms