RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 CXCL1P09341 107 aa15.41■□□□□ 0.06
SMCO4-201ENST00000298966 DEFB131AP59861 70 aa15.41■□□□□ 0.06
SMCO4-201ENST00000298966 APRG1Q8IVJ8 170 aa15.41■□□□□ 0.06
SMCO4-201ENST00000298966 Q8TAT8 98 aa15.41■□□□□ 0.06
SMCO4-201ENST00000298966 RPP21Q9H633 154 aaKnown RBP15.41■□□□□ 0.06
SMCO4-201ENST00000298966 A8MTW9 85 aa15.4■□□□□ 0.06
SMCO4-201ENST00000298966 FABP5P3A8MUU1 101 aa15.4■□□□□ 0.06
SMCO4-201ENST00000298966 HLA-DRB4P13762 266 aa15.4■□□□□ 0.06
SMCO4-201ENST00000298966 TSPOP30536 169 aa15.4■□□□□ 0.06
SMCO4-201ENST00000298966 LEPP41159 167 aa15.4■□□□□ 0.06
SMCO4-201ENST00000298966 RPL19P84098 196 aaKnown RBP15.4■□□□□ 0.06
SMCO4-201ENST00000298966 FAM210BQ96KR6 192 aa15.4■□□□□ 0.06
SMCO4-201ENST00000298966 C8orf49Q96NF6 230 aa15.4■□□□□ 0.06
SMCO4-201ENST00000298966 HLA-DRB4X5D2U9 266 aa15.4■□□□□ 0.06
SMCO4-201ENST00000298966 SMIM27A0A1W2PRY6 76 aa15.39■□□□□ 0.05
SMCO4-201ENST00000298966 FAM231BA6NCW3 169 aa15.39■□□□□ 0.05
SMCO4-201ENST00000298966 CEMP1Q6PRD7 247 aaPredicted RBP15.39■□□□□ 0.05
SMCO4-201ENST00000298966 OVOL2Q9BRP0 275 aa15.39■□□□□ 0.05
SMCO4-201ENST00000298966 KLK5Q9Y337 293 aaPredicted RBP15.39■□□□□ 0.05
SMCO4-201ENST00000298966 HECTD4Q9Y4D8 3996 aa15.39■□□□□ 0.05
SMCO4-201ENST00000298966 KIAA1109Q2LD37 5005 aa15.39■□□□□ 0.05
SMCO4-201ENST00000298966 A0A1W2PPQ1 181 aa15.38■□□□□ 0.05
SMCO4-201ENST00000298966 XKRY2A2RUG3 117 aa15.38■□□□□ 0.05
SMCO4-201ENST00000298966 A8MWL6 223 aa15.38■□□□□ 0.05
SMCO4-201ENST00000298966 F6UB75 175 aa15.38■□□□□ 0.05
SMCO4-201ENST00000298966 TYMSP04818 313 aa15.38■□□□□ 0.05
SMCO4-201ENST00000298966 PRB4P10163 310 aaPredicted RBP15.38■□□□□ 0.05
SMCO4-201ENST00000298966 RPS20P60866 119 aaKnown RBP15.38■□□□□ 0.05
SMCO4-201ENST00000298966 GFRA4Q9GZZ7 299 aa15.38■□□□□ 0.05
SMCO4-201ENST00000298966 CRIP1P50238 77 aa15.37■□□□□ 0.05
SMCO4-201ENST00000298966 TSKUQ8WUA8 353 aa15.37■□□□□ 0.05
SMCO4-201ENST00000298966 FAM3BP58499 235 aaPredicted RBP15.36■□□□□ 0.05
SMCO4-201ENST00000298966 ODF3L2Q3SX64 289 aa15.36■□□□□ 0.05
SMCO4-201ENST00000298966 ZFAND2AQ8N6M9 145 aa15.36■□□□□ 0.05
SMCO4-201ENST00000298966 TMA7Q9Y2S6 64 aaKnown RBP15.36■□□□□ 0.05
SMCO4-201ENST00000298966 TRAV21A0A0B4J279 112 aa15.35■□□□□ 0.05
SMCO4-201ENST00000298966 A0A0J9YWU9 116 aa15.35■□□□□ 0.05
SMCO4-201ENST00000298966 KLLNB2CW77 178 aa15.35■□□□□ 0.05
SMCO4-201ENST00000298966 H3BMM0 161 aa15.35■□□□□ 0.05
SMCO4-201ENST00000298966 SH2D1AO60880 128 aa15.35■□□□□ 0.05
SMCO4-201ENST00000298966 GPX1P07203 203 aa15.35■□□□□ 0.05
SMCO4-201ENST00000298966 ZNF705DP0CH99 300 aaPredicted RBP15.35■□□□□ 0.05
SMCO4-201ENST00000298966 ZNF705BP0CI00 300 aaPredicted RBP15.35■□□□□ 0.05
SMCO4-201ENST00000298966 LOC102724200A0A096LPH7 203 aaPredicted RBP15.34■□□□□ 0.05
SMCO4-201ENST00000298966 AMBPP02760 352 aa15.34■□□□□ 0.05
SMCO4-201ENST00000298966 GDF5OSQ5U4N7 250 aa15.34■□□□□ 0.05
SMCO4-201ENST00000298966 Q6AWC8 147 aa15.34■□□□□ 0.05
SMCO4-201ENST00000298966 OR2D3Q8NGH3 330 aa15.34■□□□□ 0.05
SMCO4-201ENST00000298966 CDKN1BP46527 198 aa15.33■□□□□ 0.04
SMCO4-201ENST00000298966 RPS10P46783 165 aaKnown RBP15.33■□□□□ 0.04
SMCO4-201ENST00000298966 LINC01559Q495D7 138 aa15.33■□□□□ 0.04
SMCO4-201ENST00000298966 ACTL10Q5JWF8 245 aa15.33■□□□□ 0.04
SMCO4-201ENST00000298966 NAT8BQ9UHF3 227 aa15.33■□□□□ 0.04
SMCO4-201ENST00000298966 TMEM189A5PLL7 270 aa15.32■□□□□ 0.04
SMCO4-201ENST00000298966 CA1P00915 261 aaPredicted RBP15.32■□□□□ 0.04
SMCO4-201ENST00000298966 ZNF80P51504 273 aaPredicted RBP15.32■□□□□ 0.04
SMCO4-201ENST00000298966 DEFB1P60022 68 aa15.32■□□□□ 0.04
SMCO4-201ENST00000298966 C1orf196B1AJZ1 125 aa15.31■□□□□ 0.04
SMCO4-201ENST00000298966 COX19Q49B96 90 aa15.31■□□□□ 0.04
SMCO4-201ENST00000298966 LGALS9CQ6DKI2 356 aa15.31■□□□□ 0.04
SMCO4-201ENST00000298966 AMTNQ6UX39 209 aa15.31■□□□□ 0.04
SMCO4-201ENST00000298966 STHQ8IWL8 128 aa15.31■□□□□ 0.04
SMCO4-201ENST00000298966 NEU1Q99519 415 aa15.31■□□□□ 0.04
SMCO4-201ENST00000298966 C7orf71A4D174 169 aa15.3■□□□□ 0.04
SMCO4-201ENST00000298966 KNCNA6PVL3 124 aa15.3■□□□□ 0.04
SMCO4-201ENST00000298966 FOXA3P55318 350 aaPredicted RBP15.3■□□□□ 0.04
SMCO4-201ENST00000298966 TCL1AP56279 114 aa15.3■□□□□ 0.04
SMCO4-201ENST00000298966 NUTF2P61970 127 aaKnown RBP15.3■□□□□ 0.04
SMCO4-201ENST00000298966 C20orf144Q9BQM9 153 aa15.3■□□□□ 0.04
SMCO4-201ENST00000298966 AGRNO00468 2067 aa15.29■□□□□ 0.04
SMCO4-201ENST00000298966 HIGD1CA8MV81 97 aa15.29■□□□□ 0.04
SMCO4-201ENST00000298966 RAB5BP61020 215 aa15.29■□□□□ 0.04
SMCO4-201ENST00000298966 RASL11AQ6T310 242 aa15.29■□□□□ 0.04
SMCO4-201ENST00000298966 NUP35Q8NFH5 326 aa15.29■□□□□ 0.04
SMCO4-201ENST00000298966 TP53TG1Q9Y2A0 90 aa15.29■□□□□ 0.04
SMCO4-201ENST00000298966 ORM1P02763 201 aa15.28■□□□□ 0.04
SMCO4-201ENST00000298966 ATP5L2Q7Z4Y8 100 aa15.28■□□□□ 0.04
SMCO4-201ENST00000298966 TRPT1Q86TN4 253 aaKnown RBP15.28■□□□□ 0.04
SMCO4-201ENST00000298966 GTSF1Q8WW33 167 aa15.28■□□□□ 0.04
SMCO4-201ENST00000298966 KCNS1Q96KK3 526 aa15.28■□□□□ 0.04
SMCO4-201ENST00000298966 VPS13DQ5THJ4 4388 aa15.28■□□□□ 0.04
SMCO4-201ENST00000298966 SPRY2O43597 315 aa15.27■□□□□ 0.04
SMCO4-201ENST00000298966 RNASE4P34096 147 aaKnown RBP15.26■□□□□ 0.03
SMCO4-201ENST00000298966 PRR9Q5T870 116 aa15.26■□□□□ 0.03
SMCO4-201ENST00000298966 MORN3Q6PF18 240 aaPredicted RBP15.26■□□□□ 0.03
SMCO4-201ENST00000298966 Q6ZWC4 215 aa15.26■□□□□ 0.03
SMCO4-201ENST00000298966 DNAH6Q9C0G6 4158 aa15.25■□□□□ 0.03
SMCO4-201ENST00000298966 MT-ND6P03923 174 aa15.25■□□□□ 0.03
SMCO4-201ENST00000298966 APOC4P55056 127 aa15.25■□□□□ 0.03
SMCO4-201ENST00000298966 WDR73Q6P4I2 378 aa15.25■□□□□ 0.03
SMCO4-201ENST00000298966 PHLDA1Q8WV24 401 aaPredicted RBP15.25■□□□□ 0.03
SMCO4-201ENST00000298966 BORCS7Q96B45 105 aa15.25■□□□□ 0.03
SMCO4-201ENST00000298966 GNB1LQ9BYB4 327 aa15.25■□□□□ 0.03
SMCO4-201ENST00000298966 A0A1B0GW15 77 aa15.24■□□□□ 0.03
SMCO4-201ENST00000298966 PHOX2AO14813 284 aa15.24■□□□□ 0.03
SMCO4-201ENST00000298966 IGKV3-20P01619 116 aa15.24■□□□□ 0.03
SMCO4-201ENST00000298966 TRGC2P03986 189 aa15.24■□□□□ 0.03
SMCO4-201ENST00000298966 MED14OSP0DP75 135 aa15.24■□□□□ 0.03
SMCO4-201ENST00000298966 SPINK13Q1W4C9 94 aa15.24■□□□□ 0.03
SMCO4-201ENST00000298966 DEFB135Q30KP9 77 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms