RNA–Protein interactions for RNA: ENST00000298428.13

SEC61A2-201, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A2, Length 1,893 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-201ENST00000298428 COX19Q49B96 90 aa13.66□□□□□ -0.22
SEC61A2-201ENST00000298428 MUC21Q5SSG8 566 aa13.66□□□□□ -0.22
SEC61A2-201ENST00000298428 WDR73Q6P4I2 378 aa13.66□□□□□ -0.22
SEC61A2-201ENST00000298428 RASL11AQ6T310 242 aa13.66□□□□□ -0.22
SEC61A2-201ENST00000298428 FER1L6-AS1Q8NA97 138 aa13.66□□□□□ -0.22
SEC61A2-201ENST00000298428 TRAPPC1Q9Y5R8 145 aa13.66□□□□□ -0.22
SEC61A2-201ENST00000298428 TRRAPQ9Y4A5 3859 aa13.66□□□□□ -0.22
SEC61A2-201ENST00000298428 LYZL1Q6UWQ5 148 aa13.65□□□□□ -0.22
SEC61A2-201ENST00000298428 BORCS7Q96B45 105 aa13.65□□□□□ -0.22
SEC61A2-201ENST00000298428 GNB1LQ9BYB4 327 aa13.65□□□□□ -0.22
SEC61A2-201ENST00000298428 A0A1B0GUT8 65 aa13.65□□□□□ -0.22
SEC61A2-201ENST00000298428 A0A1B0GXF2 115 aa13.65□□□□□ -0.22
SEC61A2-201ENST00000298428 ZNF324O75467 553 aaPredicted RBP13.65□□□□□ -0.22
SEC61A2-201ENST00000298428 ARMS2P0C7Q2 107 aa13.65□□□□□ -0.22
SEC61A2-201ENST00000298428 CAMPP49913 170 aa13.65□□□□□ -0.22
SEC61A2-201ENST00000298428 RAB4BP61018 213 aa13.65□□□□□ -0.22
SEC61A2-201ENST00000298428 HBBP68871 147 aa13.65□□□□□ -0.22
SEC61A2-201ENST00000298428 FABP9Q0Z7S8 132 aa13.65□□□□□ -0.22
SEC61A2-201ENST00000298428 ANXA2RQ3ZCQ2 193 aa13.65□□□□□ -0.22
SEC61A2-201ENST00000298428 FRZBQ92765 325 aa13.65□□□□□ -0.22
SEC61A2-201ENST00000298428 CLUHP3Q96NS8 147 aa13.65□□□□□ -0.22
SEC61A2-201ENST00000298428 C19orf73Q9NVV2 129 aa13.65□□□□□ -0.22
SEC61A2-201ENST00000298428 CTRLP40313 264 aa13.64□□□□□ -0.23
SEC61A2-201ENST00000298428 TMEM136Q6ZRR5 245 aa13.64□□□□□ -0.23
SEC61A2-201ENST00000298428 PHOX2AO14813 284 aa13.63□□□□□ -0.23
SEC61A2-201ENST00000298428 MT-ND6P03923 174 aa13.63□□□□□ -0.23
SEC61A2-201ENST00000298428 FAM159AQ6UWV7 190 aa13.63□□□□□ -0.23
SEC61A2-201ENST00000298428 TRPT1Q86TN4 253 aaKnown RBP13.63□□□□□ -0.23
SEC61A2-201ENST00000298428 WFDC10AQ9H1F0 79 aa13.63□□□□□ -0.23
SEC61A2-201ENST00000298428 IGLL1P15814 213 aa13.63□□□□□ -0.23
SEC61A2-201ENST00000298428 RIGQ13278 110 aa13.63□□□□□ -0.23
SEC61A2-201ENST00000298428 MRPL18Q9H0U6 180 aaKnown RBP13.63□□□□□ -0.23
SEC61A2-201ENST00000298428 CRXO43186 299 aaPredicted RBP13.62□□□□□ -0.23
SEC61A2-201ENST00000298428 HLA-DQA1P01909 254 aa13.62□□□□□ -0.23
SEC61A2-201ENST00000298428 MUC21A0A0G2JKD1 596 aa13.61□□□□□ -0.23
SEC61A2-201ENST00000298428 MUC21A0A140T8X8 626 aa13.61□□□□□ -0.23
SEC61A2-201ENST00000298428 GTSCR1Q86UQ5 136 aa13.61□□□□□ -0.23
SEC61A2-201ENST00000298428 KCNS1Q96KK3 526 aa13.61□□□□□ -0.23
SEC61A2-201ENST00000298428 F2Z2F3 143 aa13.61□□□□□ -0.23
SEC61A2-201ENST00000298428 ASIPP42127 132 aa13.61□□□□□ -0.23
SEC61A2-201ENST00000298428 SSTP61278 116 aa13.61□□□□□ -0.23
SEC61A2-201ENST00000298428 NOTCH3Q9UM47 2321 aa13.6□□□□□ -0.23
SEC61A2-201ENST00000298428 A0A1B0GW15 77 aa13.6□□□□□ -0.23
SEC61A2-201ENST00000298428 H3BVH4 76 aa13.6□□□□□ -0.23
SEC61A2-201ENST00000298428 GNRH2O43555 120 aa13.6□□□□□ -0.23
SEC61A2-201ENST00000298428 TRGC1P0CF51 173 aa13.6□□□□□ -0.23
SEC61A2-201ENST00000298428 S100A4P26447 101 aaKnown RBP13.6□□□□□ -0.23
SEC61A2-201ENST00000298428 HIST1H2BKO60814 126 aa13.59□□□□□ -0.23
SEC61A2-201ENST00000298428 S100A8P05109 93 aa13.59□□□□□ -0.23
SEC61A2-201ENST00000298428 HIST1H2BJP06899 126 aa13.59□□□□□ -0.23
SEC61A2-201ENST00000298428 HIST1H2BOP23527 126 aa13.59□□□□□ -0.23
SEC61A2-201ENST00000298428 HIST1H2BBP33778 126 aa13.59□□□□□ -0.23
SEC61A2-201ENST00000298428 HIST1H2BDP58876 126 aa13.59□□□□□ -0.23
SEC61A2-201ENST00000298428 NUTF2P61970 127 aaKnown RBP13.59□□□□□ -0.23
SEC61A2-201ENST00000298428 HIST1H2BCP62807 126 aa13.59□□□□□ -0.23
SEC61A2-201ENST00000298428 HIST2H2BEQ16778 126 aa13.59□□□□□ -0.23
SEC61A2-201ENST00000298428 TDRG1Q3Y452 100 aa13.59□□□□□ -0.23
SEC61A2-201ENST00000298428 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.59□□□□□ -0.23
SEC61A2-201ENST00000298428 HIST1H2BHQ93079 126 aa13.59□□□□□ -0.23
SEC61A2-201ENST00000298428 HIST1H2BNQ99877 126 aa13.59□□□□□ -0.23
SEC61A2-201ENST00000298428 HIST1H2BMQ99879 126 aa13.59□□□□□ -0.23
SEC61A2-201ENST00000298428 SSBP4Q9BWG4 385 aaPredicted RBP13.59□□□□□ -0.23
SEC61A2-201ENST00000298428 CNFNQ9BYD5 112 aa13.59□□□□□ -0.23
SEC61A2-201ENST00000298428 STAB1Q9NY15 2570 aa13.59□□□□□ -0.23
SEC61A2-201ENST00000298428 WIPF1O43516 503 aa13.59□□□□□ -0.23
SEC61A2-201ENST00000298428 OR5AL1P0C617 328 aa13.59□□□□□ -0.23
SEC61A2-201ENST00000298428 RBMY1A1P0DJD3 496 aaKnown RBP13.59□□□□□ -0.23
SEC61A2-201ENST00000298428 RBMY1CP0DJD4 496 aa13.59□□□□□ -0.23
SEC61A2-201ENST00000298428 RBMY1FQ15415 496 aaKnown RBP13.59□□□□□ -0.23
SEC61A2-201ENST00000298428 IGHV1OR15-1A0A075B7D0 117 aa13.58□□□□□ -0.24
SEC61A2-201ENST00000298428 SNAI2O43623 268 aa13.58□□□□□ -0.24
SEC61A2-201ENST00000298428 INSP01308 110 aa13.58□□□□□ -0.24
SEC61A2-201ENST00000298428 AMBPP02760 352 aa13.58□□□□□ -0.24
SEC61A2-201ENST00000298428 TWIST1Q15672 202 aa13.58□□□□□ -0.24
SEC61A2-201ENST00000298428 TIMM8BQ9Y5J9 83 aaPredicted RBP13.58□□□□□ -0.24
SEC61A2-201ENST00000298428 APCSP02743 223 aa13.57□□□□□ -0.24
SEC61A2-201ENST00000298428 NTF3P20783 257 aa13.57□□□□□ -0.24
SEC61A2-201ENST00000298428 SLAQ13239 276 aa13.57□□□□□ -0.24
SEC61A2-201ENST00000298428 DNLZQ5SXM8 178 aa13.57□□□□□ -0.24
SEC61A2-201ENST00000298428 DEFB125Q8N687 156 aa13.57□□□□□ -0.24
SEC61A2-201ENST00000298428 OR10AG1Q8NH19 301 aa13.57□□□□□ -0.24
SEC61A2-201ENST00000298428 PRR31Q5SQ13 230 aa13.57□□□□□ -0.24
SEC61A2-201ENST00000298428 XCL2Q9UBD3 114 aa13.57□□□□□ -0.24
SEC61A2-201ENST00000298428 MED14OSP0DP75 135 aa13.56□□□□□ -0.24
SEC61A2-201ENST00000298428 C20orf144Q9BQM9 153 aa13.56□□□□□ -0.24
SEC61A2-201ENST00000298428 TP53TG3Q9ULZ0 132 aa13.56□□□□□ -0.24
SEC61A2-201ENST00000298428 COL6A5A8TX70 2615 aa13.56□□□□□ -0.24
SEC61A2-201ENST00000298428 S100A6P06703 90 aa13.55□□□□□ -0.24
SEC61A2-201ENST00000298428 RNASE3P12724 160 aaKnown RBP13.55□□□□□ -0.24
SEC61A2-201ENST00000298428 RPL35AP18077 110 aaKnown RBP13.55□□□□□ -0.24
SEC61A2-201ENST00000298428 Q8N1Y9 231 aa13.55□□□□□ -0.24
SEC61A2-201ENST00000298428 GATD1Q8NB37 220 aa13.55□□□□□ -0.24
SEC61A2-201ENST00000298428 CACNG7P62955 275 aa13.55□□□□□ -0.24
SEC61A2-201ENST00000298428 KIAA1644Q3SXP7 199 aa13.55□□□□□ -0.24
SEC61A2-201ENST00000298428 SPANXN1Q5VSR9 72 aa13.55□□□□□ -0.24
SEC61A2-201ENST00000298428 SCRT2Q9NQ03 307 aa13.55□□□□□ -0.24
SEC61A2-201ENST00000298428 MSRB1Q9NZV6 116 aa13.55□□□□□ -0.24
SEC61A2-201ENST00000298428 PHLDA3Q9Y5J5 127 aa13.55□□□□□ -0.24
SEC61A2-201ENST00000298428 ZNF493Q6ZR52 646 aa13.54□□□□□ -0.24
SEC61A2-201ENST00000298428 IGHV3-16A0A0C4DH30 117 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms