RNA–Protein interactions for RNA: ENST00000297265.4

CHMP4C-201, Transcript of charged multivesicular body protein 4C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4C, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4C-201ENST00000297265 WFDC12Q8WWY7 111 aa10.15□□□□□ -0.79
CHMP4C-201ENST00000297265 SAMD10Q9BYL1 202 aa10.15□□□□□ -0.79
CHMP4C-201ENST00000297265 HIVEP2P31629 2446 aa10.14□□□□□ -0.79
CHMP4C-201ENST00000297265 SNAI2O43623 268 aa10.14□□□□□ -0.79
CHMP4C-201ENST00000297265 CSN3P07498 182 aa10.14□□□□□ -0.79
CHMP4C-201ENST00000297265 CD28P10747 220 aa10.14□□□□□ -0.79
CHMP4C-201ENST00000297265 PSMG4Q5JS54 123 aa10.14□□□□□ -0.79
CHMP4C-201ENST00000297265 DMRTA1Q5VZB9 504 aa10.14□□□□□ -0.79
CHMP4C-201ENST00000297265 RNF185Q96GF1 192 aa10.14□□□□□ -0.79
CHMP4C-201ENST00000297265 TMEM191AQ9H0A3 160 aa10.14□□□□□ -0.79
CHMP4C-201ENST00000297265 TRAV21A0A0B4J279 112 aa10.13□□□□□ -0.79
CHMP4C-201ENST00000297265 A0A0J9YX75 114 aa10.13□□□□□ -0.79
CHMP4C-201ENST00000297265 OR5AL1P0C617 328 aa10.13□□□□□ -0.79
CHMP4C-201ENST00000297265 PMCHP20382 165 aa10.13□□□□□ -0.79
CHMP4C-201ENST00000297265 MRPL51Q4U2R6 128 aaKnown RBP10.13□□□□□ -0.79
CHMP4C-201ENST00000297265 C11orf44Q8N8P7 122 aa10.13□□□□□ -0.79
CHMP4C-201ENST00000297265 Q8N976 141 aa10.13□□□□□ -0.79
CHMP4C-201ENST00000297265 OR10AG1Q8NH19 301 aa10.13□□□□□ -0.79
CHMP4C-201ENST00000297265 RAX2Q96IS3 184 aa10.13□□□□□ -0.79
CHMP4C-201ENST00000297265 IGHV4-4A0A075B6R2 117 aa10.13□□□□□ -0.79
CHMP4C-201ENST00000297265 RNASE4P34096 147 aaKnown RBP10.13□□□□□ -0.79
CHMP4C-201ENST00000297265 S100A12P80511 92 aa10.13□□□□□ -0.79
CHMP4C-201ENST00000297265 FHL3Q13643 280 aa10.13□□□□□ -0.79
CHMP4C-201ENST00000297265 KHDC1LQ5JSQ8 128 aa10.13□□□□□ -0.79
CHMP4C-201ENST00000297265 NIPBLQ6KC79 2804 aaeCLIP10.12□□□□□ -0.79
CHMP4C-201ENST00000297265 D6R8Y8 96 aa10.12□□□□□ -0.79
CHMP4C-201ENST00000297265 GAS8-AS1O95177 125 aa10.12□□□□□ -0.79
CHMP4C-201ENST00000297265 RAB4AP20338 218 aa10.12□□□□□ -0.79
CHMP4C-201ENST00000297265 ANXA2RQ3ZCQ2 193 aa10.12□□□□□ -0.79
CHMP4C-201ENST00000297265 DPF1Q92782 380 aa10.12□□□□□ -0.79
CHMP4C-201ENST00000297265 LINC00614P0C842 121 aa10.11□□□□□ -0.79
CHMP4C-201ENST00000297265 SNRPD3P62318 126 aaKnown RBP10.11□□□□□ -0.79
CHMP4C-201ENST00000297265 RNASEKQ6P5S7 137 aaKnown RBP10.11□□□□□ -0.79
CHMP4C-201ENST00000297265 CITED2Q99967 270 aaPredicted RBP10.11□□□□□ -0.79
CHMP4C-201ENST00000297265 GNRH2O43555 120 aa10.1□□□□□ -0.79
CHMP4C-201ENST00000297265 HSBP1O75506 76 aa10.1□□□□□ -0.79
CHMP4C-201ENST00000297265 PMCHL1Q16048 86 aa10.1□□□□□ -0.79
CHMP4C-201ENST00000297265 TMEM61Q8N0U2 210 aa10.1□□□□□ -0.79
CHMP4C-201ENST00000297265 ZNF664Q8N3J9 261 aa10.1□□□□□ -0.79
CHMP4C-201ENST00000297265 CHCHD1Q96BP2 118 aaKnown RBP10.1□□□□□ -0.79
CHMP4C-201ENST00000297265 PEMTQ9UBM1 199 aa10.1□□□□□ -0.79
CHMP4C-201ENST00000297265 NAGKQ9UJ70 344 aa10.1□□□□□ -0.79
CHMP4C-201ENST00000297265 HIVEP1P15822 2718 aa10.1□□□□□ -0.79
CHMP4C-201ENST00000297265 LINC00587B1AMM8 73 aa10.1□□□□□ -0.79
CHMP4C-201ENST00000297265 SPRY2O43597 315 aa10.1□□□□□ -0.79
CHMP4C-201ENST00000297265 SCGB1D1O95968 90 aa10.1□□□□□ -0.79
CHMP4C-201ENST00000297265 RNASE3P12724 160 aaKnown RBP10.1□□□□□ -0.79
CHMP4C-201ENST00000297265 EVI2AP22794 236 aa10.1□□□□□ -0.79
CHMP4C-201ENST00000297265 ZNF418Q8TF45 676 aaPredicted RBP10.1□□□□□ -0.79
CHMP4C-201ENST00000297265 ODF3Q96PU9 254 aa10.1□□□□□ -0.79
CHMP4C-201ENST00000297265 SCRT2Q9NQ03 307 aa10.1□□□□□ -0.79
CHMP4C-201ENST00000297265 MUC4Q99102 2169 aa10.09□□□□□ -0.79
CHMP4C-201ENST00000297265 SMKR1H3BMG3 65 aa10.09□□□□□ -0.79
CHMP4C-201ENST00000297265 H3BVH4 76 aa10.09□□□□□ -0.79
CHMP4C-201ENST00000297265 C3orf79P0CE67 100 aa10.09□□□□□ -0.79
CHMP4C-201ENST00000297265 SCGB2A2Q13296 93 aa10.09□□□□□ -0.79
CHMP4C-201ENST00000297265 DEFB114Q30KQ6 69 aa10.09□□□□□ -0.79
CHMP4C-201ENST00000297265 TDRG1Q3Y452 100 aa10.09□□□□□ -0.79
CHMP4C-201ENST00000297265 EBLN2Q6P2I7 272 aa10.09□□□□□ -0.79
CHMP4C-201ENST00000297265 AMTNQ6UX39 209 aa10.09□□□□□ -0.79
CHMP4C-201ENST00000297265 ORMDL3Q8N138 153 aa10.09□□□□□ -0.79
CHMP4C-201ENST00000297265 WNK1Q9H4A3 2382 aa10.09□□□□□ -0.79
CHMP4C-201ENST00000297265 IGHV1-24A0A0C4DH33 117 aa10.08□□□□□ -0.8
CHMP4C-201ENST00000297265 A0A1W2PRX2 142 aa10.08□□□□□ -0.8
CHMP4C-201ENST00000297265 PRELID3AQ96N28 172 aa10.08□□□□□ -0.8
CHMP4C-201ENST00000297265 NSD1Q96L73 2696 aaPredicted RBP10.08□□□□□ -0.8
CHMP4C-201ENST00000297265 M0R2Z0 102 aa10.08□□□□□ -0.8
CHMP4C-201ENST00000297265 CCL24O00175 119 aa10.08□□□□□ -0.8
CHMP4C-201ENST00000297265 NPYP01303 97 aa10.08□□□□□ -0.8
CHMP4C-201ENST00000297265 IGKV3-20P01619 116 aa10.08□□□□□ -0.8
CHMP4C-201ENST00000297265 IFI27P40305 119 aaPredicted RBP10.08□□□□□ -0.8
CHMP4C-201ENST00000297265 SIGLEC8Q9NYZ4 499 aa10.08□□□□□ -0.8
CHMP4C-201ENST00000297265 TRAV2A0A0B4J234 112 aa10.07□□□□□ -0.8
CHMP4C-201ENST00000297265 ADARB2-AS1A8MUL3 147 aa10.07□□□□□ -0.8
CHMP4C-201ENST00000297265 PROK1P58294 105 aa10.07□□□□□ -0.8
CHMP4C-201ENST00000297265 FOXI2Q6ZQN5 318 aa10.07□□□□□ -0.8
CHMP4C-201ENST00000297265 ZNF256Q9Y2P7 627 aaPredicted RBP10.07□□□□□ -0.8
CHMP4C-201ENST00000297265 TSSC4Q9Y5U2 329 aaPredicted RBP10.07□□□□□ -0.8
CHMP4C-201ENST00000297265 TRAV12-2A0A075B6T6 113 aa10.06□□□□□ -0.8
CHMP4C-201ENST00000297265 TRAV12-3A0A0B4J271 114 aa10.06□□□□□ -0.8
CHMP4C-201ENST00000297265 A8MTW9 85 aa10.06□□□□□ -0.8
CHMP4C-201ENST00000297265 NDUFA7O95182 113 aa10.06□□□□□ -0.8
CHMP4C-201ENST00000297265 NCR2O95944 276 aa10.06□□□□□ -0.8
CHMP4C-201ENST00000297265 CKS2P33552 79 aa10.06□□□□□ -0.8
CHMP4C-201ENST00000297265 KRTDAPP60985 99 aa10.06□□□□□ -0.8
CHMP4C-201ENST00000297265 ZNF124Q15973 351 aa10.06□□□□□ -0.8
CHMP4C-201ENST00000297265 CD300EQ496F6 205 aaPredicted RBP10.06□□□□□ -0.8
CHMP4C-201ENST00000297265 TEX43Q6ZNM6 134 aa10.06□□□□□ -0.8
CHMP4C-201ENST00000297265 LINC00173Q6ZV60 143 aa10.06□□□□□ -0.8
CHMP4C-201ENST00000297265 PRO1933Q9H354 126 aa10.06□□□□□ -0.8
CHMP4C-201ENST00000297265 A0A096LNJ9 63 aa10.06□□□□□ -0.8
CHMP4C-201ENST00000297265 C7orf71A4D174 169 aa10.06□□□□□ -0.8
CHMP4C-201ENST00000297265 MED14OSP0DP75 135 aa10.06□□□□□ -0.8
CHMP4C-201ENST00000297265 GATA1P15976 413 aaPredicted RBP10.06□□□□□ -0.8
CHMP4C-201ENST00000297265 DEFB131AP59861 70 aa10.06□□□□□ -0.8
CHMP4C-201ENST00000297265 CACNG7P62955 275 aa10.06□□□□□ -0.8
CHMP4C-201ENST00000297265 LOC389332A0A1B0GUA5 103 aa10.05□□□□□ -0.8
CHMP4C-201ENST00000297265 KNCNA6PVL3 124 aa10.05□□□□□ -0.8
CHMP4C-201ENST00000297265 ASIPP42127 132 aa10.05□□□□□ -0.8
CHMP4C-201ENST00000297265 CDKN1BP46527 198 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 135.7 ms