RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 UQCR10Q9UDW1 63 aa7.12□□□□□ -1.27
PRDM9-201ENST00000296682 ITPR2Q14571 2701 aa7.12□□□□□ -1.27
PRDM9-201ENST00000296682 TMEM238LA0A1B0GVL6 79 aa7.12□□□□□ -1.27
PRDM9-201ENST00000296682 CBY3A6NI87 242 aa7.12□□□□□ -1.27
PRDM9-201ENST00000296682 SIGLEC8Q9NYZ4 499 aa7.12□□□□□ -1.27
PRDM9-201ENST00000296682 PEF1Q9UBV8 284 aaKnown RBP7.12□□□□□ -1.27
PRDM9-201ENST00000296682 LEPP41159 167 aa7.12□□□□□ -1.27
PRDM9-201ENST00000296682 FAM104BQ5XKR9 115 aa7.12□□□□□ -1.27
PRDM9-201ENST00000296682 ZNF843Q8N446 348 aa7.12□□□□□ -1.27
PRDM9-201ENST00000296682 C20orf173Q96LM9 149 aa7.12□□□□□ -1.27
PRDM9-201ENST00000296682 LINC00477Q96M19 166 aa7.12□□□□□ -1.27
PRDM9-201ENST00000296682 GFRA4Q9GZZ7 299 aa7.12□□□□□ -1.27
PRDM9-201ENST00000296682 FCER1GP30273 86 aa7.11□□□□□ -1.27
PRDM9-201ENST00000296682 NEGR1Q7Z3B1 354 aa7.11□□□□□ -1.27
PRDM9-201ENST00000296682 SPATA12Q7Z6I5 190 aa7.11□□□□□ -1.27
PRDM9-201ENST00000296682 Q8N976 141 aa7.11□□□□□ -1.27
PRDM9-201ENST00000296682 URB1-AS1Q96HZ7 61 aa7.11□□□□□ -1.27
PRDM9-201ENST00000296682 MAP1LC3AQ9H492 121 aa7.11□□□□□ -1.27
PRDM9-201ENST00000296682 C7orf71A4D174 169 aa7.11□□□□□ -1.27
PRDM9-201ENST00000296682 C2orf88Q9BSF0 95 aa7.11□□□□□ -1.27
PRDM9-201ENST00000296682 C11orf21Q9P2W6 132 aa7.11□□□□□ -1.27
PRDM9-201ENST00000296682 TRAV9-2A0A087WT02 112 aa7.11□□□□□ -1.27
PRDM9-201ENST00000296682 NUDT3O95989 172 aa7.11□□□□□ -1.27
PRDM9-201ENST00000296682 IGHG4P01861 327 aa7.11□□□□□ -1.27
PRDM9-201ENST00000296682 CD7P09564 240 aa7.11□□□□□ -1.27
PRDM9-201ENST00000296682 SMIM17P0DL12 118 aa7.11□□□□□ -1.27
PRDM9-201ENST00000296682 TEX43Q6ZNM6 134 aa7.11□□□□□ -1.27
PRDM9-201ENST00000296682 MXRA5Q9NR99 2828 aa7.1□□□□□ -1.27
PRDM9-201ENST00000296682 A0A087WWL8 130 aa7.1□□□□□ -1.27
PRDM9-201ENST00000296682 FAM223BA6NKX1 122 aa7.1□□□□□ -1.27
PRDM9-201ENST00000296682 BRI3O95415 125 aa7.1□□□□□ -1.27
PRDM9-201ENST00000296682 FAM223AQ8IWN6 122 aa7.1□□□□□ -1.27
PRDM9-201ENST00000296682 DAZ1Q9NQZ3 744 aaKnown RBP7.1□□□□□ -1.27
PRDM9-201ENST00000296682 IGKV3D-20A0A0C4DH25 116 aa7.1□□□□□ -1.27
PRDM9-201ENST00000296682 RPS20P60866 119 aaKnown RBP7.1□□□□□ -1.27
PRDM9-201ENST00000296682 FAM159AQ6UWV7 190 aa7.1□□□□□ -1.27
PRDM9-201ENST00000296682 IGHV3-73A0A0B4J1V6 119 aa7.09□□□□□ -1.27
PRDM9-201ENST00000296682 TRAV8-2A0A0B4J237 113 aa7.09□□□□□ -1.27
PRDM9-201ENST00000296682 A6NDX4 124 aa7.09□□□□□ -1.27
PRDM9-201ENST00000296682 IGHG2P01859 326 aa7.09□□□□□ -1.27
PRDM9-201ENST00000296682 SPINK13Q1W4C9 94 aa7.09□□□□□ -1.27
PRDM9-201ENST00000296682 ANXA2RQ3ZCQ2 193 aa7.09□□□□□ -1.27
PRDM9-201ENST00000296682 Q6AWC8 147 aa7.09□□□□□ -1.27
PRDM9-201ENST00000296682 TMEM160Q9NX00 188 aa7.09□□□□□ -1.27
PRDM9-201ENST00000296682 LAMTOR2Q9Y2Q5 125 aa7.09□□□□□ -1.27
PRDM9-201ENST00000296682 A0A087X0K7 114 aa7.09□□□□□ -1.27
PRDM9-201ENST00000296682 M0QZK8 103 aa7.09□□□□□ -1.27
PRDM9-201ENST00000296682 IGLC3P0DOY3 106 aa7.09□□□□□ -1.27
PRDM9-201ENST00000296682 GOLT1BQ9Y3E0 138 aa7.09□□□□□ -1.27
PRDM9-201ENST00000296682 FBLL1A6NHQ2 334 aaKnown RBP7.09□□□□□ -1.27
PRDM9-201ENST00000296682 CRIP2P52943 208 aaPredicted RBP7.09□□□□□ -1.27
PRDM9-201ENST00000296682 NAA38Q9BRA0 125 aaKnown RBP7.09□□□□□ -1.27
PRDM9-201ENST00000296682 C2orf70A6NJV1 201 aa7.08□□□□□ -1.28
PRDM9-201ENST00000296682 TNFRSF6BO95407 300 aa7.08□□□□□ -1.28
PRDM9-201ENST00000296682 VAMP3Q15836 100 aa7.08□□□□□ -1.28
PRDM9-201ENST00000296682 C19orf54Q5BKX5 351 aa7.08□□□□□ -1.28
PRDM9-201ENST00000296682 PRR9Q5T870 116 aa7.08□□□□□ -1.28
PRDM9-201ENST00000296682 C18orf65Q6ZTR6 163 aa7.08□□□□□ -1.28
PRDM9-201ENST00000296682 CHCHD1Q96BP2 118 aaKnown RBP7.08□□□□□ -1.28
PRDM9-201ENST00000296682 USMG5Q96IX5 58 aa7.08□□□□□ -1.28
PRDM9-201ENST00000296682 ATP6V0BQ99437 205 aa7.08□□□□□ -1.28
PRDM9-201ENST00000296682 FOXC2Q99958 501 aa7.08□□□□□ -1.28
PRDM9-201ENST00000296682 PRM2P04554 102 aa7.08□□□□□ -1.28
PRDM9-201ENST00000296682 SLC25A16P16260 332 aa7.08□□□□□ -1.28
PRDM9-201ENST00000296682 ID1P41134 155 aa7.08□□□□□ -1.28
PRDM9-201ENST00000296682 MPV17L2Q567V2 206 aa7.08□□□□□ -1.28
PRDM9-201ENST00000296682 C9orf139Q6ZV77 190 aa7.08□□□□□ -1.28
PRDM9-201ENST00000296682 NDUFA4O00483 81 aa7.08□□□□□ -1.28
PRDM9-201ENST00000296682 ASIPP42127 132 aa7.08□□□□□ -1.28
PRDM9-201ENST00000296682 WFDC11Q8NEX6 87 aa7.08□□□□□ -1.28
PRDM9-201ENST00000296682 MEGF9Q9H1U4 602 aa7.08□□□□□ -1.28
PRDM9-201ENST00000296682 JPT2Q9H910 190 aa7.08□□□□□ -1.28
PRDM9-201ENST00000296682 TMEM8BA6NDV4 472 aa7.07□□□□□ -1.28
PRDM9-201ENST00000296682 TCF21O43680 179 aa7.07□□□□□ -1.28
PRDM9-201ENST00000296682 EMP1P54849 157 aa7.07□□□□□ -1.28
PRDM9-201ENST00000296682 SLURP1P55000 103 aa7.07□□□□□ -1.28
PRDM9-201ENST00000296682 NUTF2P61970 127 aaKnown RBP7.07□□□□□ -1.28
PRDM9-201ENST00000296682 SRSF2Q01130 221 aaKnown RBP7.07□□□□□ -1.28
PRDM9-201ENST00000296682 SLC25A34Q6PIV7 304 aa7.07□□□□□ -1.28
PRDM9-201ENST00000296682 TMEM158Q8WZ71 300 aa7.07□□□□□ -1.28
PRDM9-201ENST00000296682 RAB37Q96AX2 223 aa7.07□□□□□ -1.28
PRDM9-201ENST00000296682 IFI27L1Q96BM0 104 aa7.07□□□□□ -1.28
PRDM9-201ENST00000296682 IGHV7-4-1A0A0J9YVY3 117 aa7.07□□□□□ -1.28
PRDM9-201ENST00000296682 DYNLRB2Q8TF09 96 aa7.07□□□□□ -1.28
PRDM9-201ENST00000296682 C20orf144Q9BQM9 153 aa7.07□□□□□ -1.28
PRDM9-201ENST00000296682 TMEM208Q9BTX3 173 aa7.07□□□□□ -1.28
PRDM9-201ENST00000296682 TTTY13Q9BZ97 58 aa7.07□□□□□ -1.28
PRDM9-201ENST00000296682 YAE1D1Q9NRH1 226 aa7.07□□□□□ -1.28
PRDM9-201ENST00000296682 ZNF256Q9Y2P7 627 aaPredicted RBP7.07□□□□□ -1.28
PRDM9-201ENST00000296682 TRAV21A0A0B4J279 112 aa7.07□□□□□ -1.28
PRDM9-201ENST00000296682 HBDP02042 147 aa7.07□□□□□ -1.28
PRDM9-201ENST00000296682 TSPOP30536 169 aa7.07□□□□□ -1.28
PRDM9-201ENST00000296682 COTL1Q14019 142 aa7.07□□□□□ -1.28
PRDM9-201ENST00000296682 COL5A1-AS1Q5SY13 56 aa7.07□□□□□ -1.28
PRDM9-201ENST00000296682 ZNF575Q86XF7 245 aa7.07□□□□□ -1.28
PRDM9-201ENST00000296682 DKK2Q9UBU2 259 aa7.07□□□□□ -1.28
PRDM9-201ENST00000296682 SMPXQ9UHP9 88 aa7.07□□□□□ -1.28
PRDM9-201ENST00000296682 TRAV8-6A0A0B4J262 113 aa7.06□□□□□ -1.28
PRDM9-201ENST00000296682 KNCNA6PVL3 124 aa7.06□□□□□ -1.28
PRDM9-201ENST00000296682 SNRPD3P62318 126 aaKnown RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms