RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 A6NJY4 79 aa8.91□□□□□ -0.98
RHO-201ENST00000296271 CFHR3Q02985 330 aa8.91□□□□□ -0.98
RHO-201ENST00000296271 HIST2H2BCQ6DN03 193 aa8.91□□□□□ -0.98
RHO-201ENST00000296271 ZFAND2AQ8N6M9 145 aa8.91□□□□□ -0.98
RHO-201ENST00000296271 DEFB104AQ8WTQ1 72 aa8.91□□□□□ -0.98
RHO-201ENST00000296271 RPS20P60866 119 aaKnown RBP8.9□□□□□ -0.98
RHO-201ENST00000296271 KLHDC1Q8N7A1 406 aa8.9□□□□□ -0.98
RHO-201ENST00000296271 TMEM190Q8WZ59 177 aa8.9□□□□□ -0.98
RHO-201ENST00000296271 FLNAP21333 2647 aaKnown RBP8.9□□□□□ -0.98
RHO-201ENST00000296271 AKAP9Q99996 3911 aa8.9□□□□□ -0.98
RHO-201ENST00000296271 TMEM8BA6NDV4 472 aa8.9□□□□□ -0.99
RHO-201ENST00000296271 S100A7P31151 101 aa8.9□□□□□ -0.99
RHO-201ENST00000296271 BEX4Q9NWD9 120 aaPredicted RBP8.9□□□□□ -0.99
RHO-201ENST00000296271 HSPB8Q9UJY1 196 aa8.9□□□□□ -0.99
RHO-201ENST00000296271 MUC4Q99102 2169 aa8.89□□□□□ -0.99
RHO-201ENST00000296271 FBLL1A6NHQ2 334 aaKnown RBP8.89□□□□□ -0.99
RHO-201ENST00000296271 GNRH2O43555 120 aa8.89□□□□□ -0.99
RHO-201ENST00000296271 TNFRSF6BO95407 300 aa8.89□□□□□ -0.99
RHO-201ENST00000296271 RNASE4P34096 147 aaKnown RBP8.89□□□□□ -0.99
RHO-201ENST00000296271 LINC01545Q5VT33 79 aa8.89□□□□□ -0.99
RHO-201ENST00000296271 CYB5R2Q6BCY4 276 aa8.89□□□□□ -0.99
RHO-201ENST00000296271 CNFNQ9BYD5 112 aa8.89□□□□□ -0.99
RHO-201ENST00000296271 NPSP0C0P6 89 aa8.89□□□□□ -0.99
RHO-201ENST00000296271 COX6B1P14854 86 aa8.89□□□□□ -0.99
RHO-201ENST00000296271 CACNG7P62955 275 aa8.89□□□□□ -0.99
RHO-201ENST00000296271 LINC01356Q8N9X3 169 aa8.89□□□□□ -0.99
RHO-201ENST00000296271 USMG5Q96IX5 58 aa8.89□□□□□ -0.99
RHO-201ENST00000296271 TMEM208Q9BTX3 173 aa8.89□□□□□ -0.99
RHO-201ENST00000296271 WNK1Q9H4A3 2382 aa8.88□□□□□ -0.99
RHO-201ENST00000296271 M0R381 172 aa8.88□□□□□ -0.99
RHO-201ENST00000296271 TCF21O43680 179 aa8.88□□□□□ -0.99
RHO-201ENST00000296271 IGKV3-20P01619 116 aa8.88□□□□□ -0.99
RHO-201ENST00000296271 PET117Q6UWS5 81 aa8.88□□□□□ -0.99
RHO-201ENST00000296271 C9orf139Q6ZV77 190 aa8.88□□□□□ -0.99
RHO-201ENST00000296271 PSMB8P28062 276 aa8.88□□□□□ -0.99
RHO-201ENST00000296271 ANXA2RQ3ZCQ2 193 aa8.88□□□□□ -0.99
RHO-201ENST00000296271 MPV17L2Q567V2 206 aa8.88□□□□□ -0.99
RHO-201ENST00000296271 C18orf65Q6ZTR6 163 aa8.88□□□□□ -0.99
RHO-201ENST00000296271 DKK2Q9UBU2 259 aa8.88□□□□□ -0.99
RHO-201ENST00000296271 PEF1Q9UBV8 284 aaKnown RBP8.88□□□□□ -0.99
RHO-201ENST00000296271 ITPR2Q14571 2701 aa8.88□□□□□ -0.99
RHO-201ENST00000296271 MTORP42345 2549 aa8.87□□□□□ -0.99
RHO-201ENST00000296271 M0QZK8 103 aa8.87□□□□□ -0.99
RHO-201ENST00000296271 SPANXN1Q5VSR9 72 aa8.87□□□□□ -0.99
RHO-201ENST00000296271 DAZ1Q9NQZ3 744 aaKnown RBP8.87□□□□□ -0.99
RHO-201ENST00000296271 C20orf202A1L168 122 aa8.87□□□□□ -0.99
RHO-201ENST00000296271 LEPP41159 167 aa8.87□□□□□ -0.99
RHO-201ENST00000296271 SRSF2Q01130 221 aaKnown RBP8.87□□□□□ -0.99
RHO-201ENST00000296271 MRPL53Q96EL3 112 aaKnown RBP8.87□□□□□ -0.99
RHO-201ENST00000296271 SCRT2Q9NQ03 307 aa8.87□□□□□ -0.99
RHO-201ENST00000296271 SMPXQ9UHP9 88 aa8.87□□□□□ -0.99
RHO-201ENST00000296271 HBDP02042 147 aa8.86□□□□□ -0.99
RHO-201ENST00000296271 OR10J6PQ8NGY7 276 aa8.86□□□□□ -0.99
RHO-201ENST00000296271 SLC25A16P16260 332 aa8.86□□□□□ -0.99
RHO-201ENST00000296271 DEFB136Q30KP8 78 aa8.86□□□□□ -0.99
RHO-201ENST00000296271 HOXA3O43365 443 aaPredicted RBP8.85□□□□□ -0.99
RHO-201ENST00000296271 ZNF688P0C7X2 276 aa8.85□□□□□ -0.99
RHO-201ENST00000296271 IGHV4-31P0DP07 118 aa8.85□□□□□ -0.99
RHO-201ENST00000296271 COL5A1-AS1Q5SY13 56 aa8.85□□□□□ -0.99
RHO-201ENST00000296271 NRACQ8N912 160 aa8.85□□□□□ -0.99
RHO-201ENST00000296271 IFI27L1Q96BM0 104 aa8.85□□□□□ -0.99
RHO-201ENST00000296271 DUX3Q96PT4 197 aa8.85□□□□□ -0.99
RHO-201ENST00000296271 MAP1LC3AQ9H492 121 aa8.85□□□□□ -0.99
RHO-201ENST00000296271 ST20Q9HBF5 79 aa8.85□□□□□ -0.99
RHO-201ENST00000296271 GOLT1BQ9Y3E0 138 aa8.85□□□□□ -0.99
RHO-201ENST00000296271 A0A0G2JLM5 398 aa8.85□□□□□ -0.99
RHO-201ENST00000296271 H3BUA1 57 aa8.85□□□□□ -0.99
RHO-201ENST00000296271 SYNJ2BPP57105 145 aa8.85□□□□□ -0.99
RHO-201ENST00000296271 CFAP161Q6P656 301 aa8.85□□□□□ -0.99
RHO-201ENST00000296271 C14orf178Q8N769 122 aaPredicted RBP8.85□□□□□ -0.99
RHO-201ENST00000296271 TMEM158Q8WZ71 300 aa8.85□□□□□ -0.99
RHO-201ENST00000296271 TTTY13Q9BZ97 58 aa8.85□□□□□ -0.99
RHO-201ENST00000296271 JPT2Q9H910 190 aa8.85□□□□□ -0.99
RHO-201ENST00000296271 MRPS16Q9Y3D3 137 aaKnown RBP8.85□□□□□ -0.99
RHO-201ENST00000296271 TRAV12-2A0A075B6T6 113 aa8.84□□□□□ -0.99
RHO-201ENST00000296271 NUDT3O95989 172 aa8.84□□□□□ -0.99
RHO-201ENST00000296271 OR2K2Q8NGT1 345 aa8.84□□□□□ -0.99
RHO-201ENST00000296271 DCANP1Q8TF63 244 aa8.84□□□□□ -0.99
RHO-201ENST00000296271 RPL39LQ96EH5 51 aaKnown RBP8.84□□□□□ -0.99
RHO-201ENST00000296271 IGLV2-18A0A075B6J9 118 aa8.84□□□□□ -0.99
RHO-201ENST00000296271 SLC25A34Q6PIV7 304 aa8.84□□□□□ -0.99
RHO-201ENST00000296271 LINC00477Q96M19 166 aa8.84□□□□□ -0.99
RHO-201ENST00000296271 ATP6V0BQ99437 205 aa8.84□□□□□ -0.99
RHO-201ENST00000296271 IGHV4OR15-8A0A075B7B6 117 aa8.83□□□□□ -1
RHO-201ENST00000296271 A0A087WW49 117 aa8.83□□□□□ -1
RHO-201ENST00000296271 HSBP1L1C9JCN9 74 aa8.83□□□□□ -1
RHO-201ENST00000296271 S100A4P26447 101 aaKnown RBP8.83□□□□□ -1
RHO-201ENST00000296271 Q5PR19 223 aa8.83□□□□□ -1
RHO-201ENST00000296271 HELZ2Q9BYK8 2649 aaKnown RBP8.83□□□□□ -1
RHO-201ENST00000296271 DLEU1O43261 78 aa8.83□□□□□ -1
RHO-201ENST00000296271 RNASE3P12724 160 aaKnown RBP8.83□□□□□ -1
RHO-201ENST00000296271 DSCR9P59020 149 aa8.83□□□□□ -1
RHO-201ENST00000296271 PSMG4Q5JS54 123 aa8.83□□□□□ -1
RHO-201ENST00000296271 FAM19A4Q96LR4 140 aa8.83□□□□□ -1
RHO-201ENST00000296271 NOTCH3Q9UM47 2321 aa8.83□□□□□ -1
RHO-201ENST00000296271 TRAV12-3A0A0B4J271 114 aa8.82□□□□□ -1
RHO-201ENST00000296271 OVOL1O14753 267 aa8.82□□□□□ -1
RHO-201ENST00000296271 BRI3O95415 125 aa8.82□□□□□ -1
RHO-201ENST00000296271 C2orf91Q6ZV80 131 aa8.82□□□□□ -1
RHO-201ENST00000296271 NEGR1Q7Z3B1 354 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms