RNA–Protein interactions for RNA: ENST00000296026.4

CXCL3-201, Transcript of C-X-C motif chemokine ligand 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL3, Length 1,075 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3-201ENST00000296026 TRAV21A0A0B4J279 112 aa13.26□□□□□ -0.29
CXCL3-201ENST00000296026 LOC100131303A0A0U1RQF7 123 aa13.26□□□□□ -0.29
CXCL3-201ENST00000296026 A0A1W2PPV4 95 aa13.26□□□□□ -0.29
CXCL3-201ENST00000296026 F6UZH7 168 aa13.26□□□□□ -0.29
CXCL3-201ENST00000296026 ACOT6Q3I5F7 207 aaPredicted RBP13.26□□□□□ -0.29
CXCL3-201ENST00000296026 PQLC2Q6ZP29 291 aa13.26□□□□□ -0.29
CXCL3-201ENST00000296026 TVP23CQ96ET8 276 aa13.26□□□□□ -0.29
CXCL3-201ENST00000296026 WFDC1Q9HC57 220 aa13.26□□□□□ -0.29
CXCL3-201ENST00000296026 TRAV8-1A0A0A6YYK1 113 aa13.25□□□□□ -0.29
CXCL3-201ENST00000296026 TYMSP04818 313 aa13.25□□□□□ -0.29
CXCL3-201ENST00000296026 KRTAP10-1P60331 282 aa13.25□□□□□ -0.29
CXCL3-201ENST00000296026 ARL6IP6Q8N6S5 226 aa13.25□□□□□ -0.29
CXCL3-201ENST00000296026 TREM1Q9NP99 234 aa13.25□□□□□ -0.29
CXCL3-201ENST00000296026 CRYGDP07320 174 aa13.24□□□□□ -0.29
CXCL3-201ENST00000296026 RAB2AP61019 212 aa13.24□□□□□ -0.29
CXCL3-201ENST00000296026 C10orf126Q8N4M7 172 aa13.24□□□□□ -0.29
CXCL3-201ENST00000296026 SDF2L1Q9HCN8 221 aa13.24□□□□□ -0.29
CXCL3-201ENST00000296026 HMGB3O15347 200 aaKnown RBP13.23□□□□□ -0.29
CXCL3-201ENST00000296026 GNG5P63218 68 aa13.23□□□□□ -0.29
CXCL3-201ENST00000296026 SH2D6Q7Z4S9 175 aa13.23□□□□□ -0.29
CXCL3-201ENST00000296026 NHLRC2Q8NBF2 726 aa13.23□□□□□ -0.29
CXCL3-201ENST00000296026 KCNS1Q96KK3 526 aa13.23□□□□□ -0.29
CXCL3-201ENST00000296026 GATA1P15976 413 aaPredicted RBP13.22□□□□□ -0.29
CXCL3-201ENST00000296026 OR10G9Q8NGN4 311 aa13.22□□□□□ -0.29
CXCL3-201ENST00000296026 OR10G7Q8NGN6 311 aa13.22□□□□□ -0.29
CXCL3-201ENST00000296026 PPT1P50897 306 aa13.21□□□□□ -0.29
CXCL3-201ENST00000296026 TIRAPP58753 221 aa13.21□□□□□ -0.29
CXCL3-201ENST00000296026 ASB13Q8WXK3 278 aa13.21□□□□□ -0.29
CXCL3-201ENST00000296026 SGK494Q96LW2 274 aa13.21□□□□□ -0.29
CXCL3-201ENST00000296026 IGHV3-38A0A0C4DH36 116 aa13.2□□□□□ -0.3
CXCL3-201ENST00000296026 FBLL1A6NHQ2 334 aaKnown RBP13.2□□□□□ -0.3
CXCL3-201ENST00000296026 INAFM2P0DMQ5 153 aa13.2□□□□□ -0.3
CXCL3-201ENST00000296026 GCSHP23434 173 aa13.2□□□□□ -0.3
CXCL3-201ENST00000296026 DEFA1P59665 94 aa13.2□□□□□ -0.3
CXCL3-201ENST00000296026 DEFA3P59666 94 aa13.2□□□□□ -0.3
CXCL3-201ENST00000296026 Q5VSD8 79 aa13.2□□□□□ -0.3
CXCL3-201ENST00000296026 NDFIP1Q9BT67 221 aa13.2□□□□□ -0.3
CXCL3-201ENST00000296026 ARL14EPLP0DKL9 152 aa13.19□□□□□ -0.3
CXCL3-201ENST00000296026 ZNF876PQ49A33 203 aa13.19□□□□□ -0.3
CXCL3-201ENST00000296026 SLC25A29Q8N8R3 303 aa13.19□□□□□ -0.3
CXCL3-201ENST00000296026 FRZBQ92765 325 aa13.19□□□□□ -0.3
CXCL3-201ENST00000296026 PSCAO43653 123 aa13.18□□□□□ -0.3
CXCL3-201ENST00000296026 CDC34P49427 236 aaPredicted RBP13.18□□□□□ -0.3
CXCL3-201ENST00000296026 C11orf21Q9P2W6 132 aa13.18□□□□□ -0.3
CXCL3-201ENST00000296026 SERTM2A0A1B0GWG4 89 aa13.17□□□□□ -0.3
CXCL3-201ENST00000296026 TCRAP04437 139 aa13.17□□□□□ -0.3
CXCL3-201ENST00000296026 PFN1P07737 140 aaKnown RBP13.17□□□□□ -0.3
CXCL3-201ENST00000296026 ZNF80P51504 273 aaPredicted RBP13.17□□□□□ -0.3
CXCL3-201ENST00000296026 LINC01556Q5JQF7 62 aa13.17□□□□□ -0.3
CXCL3-201ENST00000296026 CFAP126Q5VTH2 177 aa13.17□□□□□ -0.3
CXCL3-201ENST00000296026 DPPA3Q6W0C5 159 aa13.17□□□□□ -0.3
CXCL3-201ENST00000296026 C5orf17Q8NAS9 161 aa13.17□□□□□ -0.3
CXCL3-201ENST00000296026 TRAV8-6A0A0B4J262 113 aa13.16□□□□□ -0.3
CXCL3-201ENST00000296026 TRBV6-4A0A1B0GX49 114 aa13.16□□□□□ -0.3
CXCL3-201ENST00000296026 A6NHS1 94 aa13.16□□□□□ -0.3
CXCL3-201ENST00000296026 IBA57-AS1B1ANH7 110 aa13.16□□□□□ -0.3
CXCL3-201ENST00000296026 TAAR5O14804 337 aa13.16□□□□□ -0.3
CXCL3-201ENST00000296026 RS1O15537 224 aa13.16□□□□□ -0.3
CXCL3-201ENST00000296026 STAG3L2P0CL84 134 aa13.16□□□□□ -0.3
CXCL3-201ENST00000296026 STAG3L3P0CL85 134 aa13.16□□□□□ -0.3
CXCL3-201ENST00000296026 OR10J3Q5JRS4 329 aa13.16□□□□□ -0.3
CXCL3-201ENST00000296026 HSD17B11Q8NBQ5 300 aa13.16□□□□□ -0.3
CXCL3-201ENST00000296026 PRADC1Q9BSG0 188 aa13.16□□□□□ -0.3
CXCL3-201ENST00000296026 IGLV5-52A0A0A0MRZ9 124 aa13.15□□□□□ -0.3
CXCL3-201ENST00000296026 IGHV3-73A0A0B4J1V6 119 aa13.15□□□□□ -0.3
CXCL3-201ENST00000296026 LRCOL1A6NCL2 159 aa13.15□□□□□ -0.3
CXCL3-201ENST00000296026 K7EQM0 130 aa13.15□□□□□ -0.3
CXCL3-201ENST00000296026 CIDEAO60543 219 aa13.15□□□□□ -0.3
CXCL3-201ENST00000296026 GCGP01275 180 aa13.15□□□□□ -0.3
CXCL3-201ENST00000296026 SMR3BP02814 79 aaPredicted RBP13.15□□□□□ -0.3
CXCL3-201ENST00000296026 RHOHQ15669 191 aa13.15□□□□□ -0.3
CXCL3-201ENST00000296026 OR2G3Q8NGZ4 309 aa13.15□□□□□ -0.3
CXCL3-201ENST00000296026 RAB24Q969Q5 203 aa13.15□□□□□ -0.3
CXCL3-201ENST00000296026 C9orf85Q96MD7 179 aa13.15□□□□□ -0.3
CXCL3-201ENST00000296026 PSG8Q9UQ74 426 aa13.15□□□□□ -0.3
CXCL3-201ENST00000296026 GCHFRP30047 84 aa13.14□□□□□ -0.31
CXCL3-201ENST00000296026 TMEM75Q8N9X5 138 aa13.14□□□□□ -0.31
CXCL3-201ENST00000296026 SUN5Q8TC36 379 aa13.14□□□□□ -0.31
CXCL3-201ENST00000296026 Q9HAA7 133 aa13.14□□□□□ -0.31
CXCL3-201ENST00000296026 BOLA1Q9Y3E2 137 aa13.14□□□□□ -0.31
CXCL3-201ENST00000296026 PGPEP1LA6NFU8 196 aa13.13□□□□□ -0.31
CXCL3-201ENST00000296026 IGLV2-11P01706 119 aa13.13□□□□□ -0.31
CXCL3-201ENST00000296026 IGHV3-30P01768 117 aa13.13□□□□□ -0.31
CXCL3-201ENST00000296026 IGHV3-33P01772 117 aa13.13□□□□□ -0.31
CXCL3-201ENST00000296026 IGHV3-30-3P0DP02 117 aa13.13□□□□□ -0.31
CXCL3-201ENST00000296026 IGHV3-30-5P0DP03 117 aa13.13□□□□□ -0.31
CXCL3-201ENST00000296026 SUMO1P63165 101 aaKnown RBP13.13□□□□□ -0.31
CXCL3-201ENST00000296026 FLI1Q01543 452 aaPredicted RBP13.13□□□□□ -0.31
CXCL3-201ENST00000296026 ZNF506Q5JVG8 444 aa13.13□□□□□ -0.31
CXCL3-201ENST00000296026 PSMG3Q9BT73 122 aaPredicted RBP13.13□□□□□ -0.31
CXCL3-201ENST00000296026 ATP6V0CP27449 155 aa13.12□□□□□ -0.31
CXCL3-201ENST00000296026 HAMPP81172 84 aa13.12□□□□□ -0.31
CXCL3-201ENST00000296026 ZFP69Q49AA0 526 aa13.12□□□□□ -0.31
CXCL3-201ENST00000296026 SMUG1Q53HV7 270 aa13.12□□□□□ -0.31
CXCL3-201ENST00000296026 LELP1Q5T871 98 aa13.12□□□□□ -0.31
CXCL3-201ENST00000296026 PRNTQ86SH4 94 aa13.12□□□□□ -0.31
CXCL3-201ENST00000296026 NTN5Q8WTR8 489 aaPredicted RBP13.12□□□□□ -0.31
CXCL3-201ENST00000296026 EPDR1Q9UM22 224 aa13.12□□□□□ -0.31
CXCL3-201ENST00000296026 RNASE3P12724 160 aaKnown RBP13.11□□□□□ -0.31
CXCL3-201ENST00000296026 ATP6V0E2Q8NHE4 81 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 171.1 ms