RNA–Protein interactions for RNA: ENST00000293780.4

CHRNE-201, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNE, Length 2,455 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-201ENST00000293780 TRBV12-3P01733 135 aa12.84□□□□□ -0.35
CHRNE-201ENST00000293780 GCSHP23434 173 aa12.84□□□□□ -0.35
CHRNE-201ENST00000293780 OR5A1Q8NGJ0 315 aa12.84□□□□□ -0.35
CHRNE-201ENST00000293780 LAGE3Q14657 143 aa12.84□□□□□ -0.35
CHRNE-201ENST00000293780 UNQ9165/PRO28630Q6UXU0 137 aa12.84□□□□□ -0.35
CHRNE-201ENST00000293780 MRPL35Q9NZE8 188 aaKnown RBP12.84□□□□□ -0.35
CHRNE-201ENST00000293780 DPM2O94777 84 aa12.83□□□□□ -0.36
CHRNE-201ENST00000293780 MRPL53Q96EL3 112 aaKnown RBP12.83□□□□□ -0.36
CHRNE-201ENST00000293780 TRAV41A0A0B4J266 112 aa12.83□□□□□ -0.36
CHRNE-201ENST00000293780 K7EMI3 77 aa12.83□□□□□ -0.36
CHRNE-201ENST00000293780 ATP5LO75964 103 aa12.82□□□□□ -0.36
CHRNE-201ENST00000293780 MYOZ3Q8TDC0 251 aa12.82□□□□□ -0.36
CHRNE-201ENST00000293780 GLMPQ8WWB7 406 aa12.82□□□□□ -0.36
CHRNE-201ENST00000293780 ACACBO00763 2458 aa12.82□□□□□ -0.36
CHRNE-201ENST00000293780 SPTAN1Q13813 2472 aaKnown RBP12.82□□□□□ -0.36
CHRNE-201ENST00000293780 TRBV25-1A0A075B6N4 114 aa12.82□□□□□ -0.36
CHRNE-201ENST00000293780 FABP2P12104 132 aa12.82□□□□□ -0.36
CHRNE-201ENST00000293780 CHAC1Q9BUX1 264 aa12.82□□□□□ -0.36
CHRNE-201ENST00000293780 HIF1ANQ9NWT6 349 aa12.82□□□□□ -0.36
CHRNE-201ENST00000293780 K7ERJ3 54 aa12.81□□□□□ -0.36
CHRNE-201ENST00000293780 BRD3OSQ6XYD6 125 aa12.81□□□□□ -0.36
CHRNE-201ENST00000293780 GPHB5Q86YW7 130 aa12.81□□□□□ -0.36
CHRNE-201ENST00000293780 MAPKAPK5-AS1Q8N8E1 139 aa12.81□□□□□ -0.36
CHRNE-201ENST00000293780 ITLN2Q8WWU7 325 aaPredicted RBP12.81□□□□□ -0.36
CHRNE-201ENST00000293780 ABCA2Q9BZC7 2435 aa12.81□□□□□ -0.36
CHRNE-201ENST00000293780 IGHV4-4A0A075B6R2 117 aa12.81□□□□□ -0.36
CHRNE-201ENST00000293780 PRSS47A8MTI9 375 aa12.81□□□□□ -0.36
CHRNE-201ENST00000293780 ARL3P36405 182 aa12.81□□□□□ -0.36
CHRNE-201ENST00000293780 COL12A1Q99715 3063 aa12.81□□□□□ -0.36
CHRNE-201ENST00000293780 SMIM13P0DJ93 91 aa12.8□□□□□ -0.36
CHRNE-201ENST00000293780 C19orf54Q5BKX5 351 aa12.8□□□□□ -0.36
CHRNE-201ENST00000293780 SAMD5Q5TGI4 173 aa12.8□□□□□ -0.36
CHRNE-201ENST00000293780 HIGD1BQ9P298 99 aa12.8□□□□□ -0.36
CHRNE-201ENST00000293780 SMPXQ9UHP9 88 aa12.8□□□□□ -0.36
CHRNE-201ENST00000293780 C19orf84I3L1E1 186 aa12.8□□□□□ -0.36
CHRNE-201ENST00000293780 M0R381 172 aa12.8□□□□□ -0.36
CHRNE-201ENST00000293780 MOB4Q9Y3A3 225 aa12.8□□□□□ -0.36
CHRNE-201ENST00000293780 CHTOPQ9Y3Y2 248 aaKnown RBP12.8□□□□□ -0.36
CHRNE-201ENST00000293780 CIDEAO60543 219 aa12.79□□□□□ -0.36
CHRNE-201ENST00000293780 RPL24P83731 157 aaKnown RBP12.79□□□□□ -0.36
CHRNE-201ENST00000293780 SRSF1Q07955 248 aaKnown RBP eCLIP12.79□□□□□ -0.36
CHRNE-201ENST00000293780 KLK15Q9H2R5 256 aa12.79□□□□□ -0.36
CHRNE-201ENST00000293780 ZFAND2AQ8N6M9 145 aa12.79□□□□□ -0.36
CHRNE-201ENST00000293780 IGKV3-7A0A075B6H7 116 aa12.78□□□□□ -0.36
CHRNE-201ENST00000293780 IGHV3-11P01762 117 aa12.78□□□□□ -0.36
CHRNE-201ENST00000293780 C9orf139Q6ZV77 190 aa12.78□□□□□ -0.36
CHRNE-201ENST00000293780 A0A087WX48 190 aa12.78□□□□□ -0.36
CHRNE-201ENST00000293780 RPL39LQ96EH5 51 aaKnown RBP12.78□□□□□ -0.36
CHRNE-201ENST00000293780 MAP1AP78559 2803 aaPredicted RBP12.77□□□□□ -0.36
CHRNE-201ENST00000293780 FAM223BA6NKX1 122 aa12.77□□□□□ -0.37
CHRNE-201ENST00000293780 F6UB75 175 aa12.77□□□□□ -0.37
CHRNE-201ENST00000293780 LY6EQ16553 131 aa12.77□□□□□ -0.37
CHRNE-201ENST00000293780 FAM223AQ8IWN6 122 aa12.77□□□□□ -0.37
CHRNE-201ENST00000293780 TEX48A0A1B0GUV7 120 aa12.77□□□□□ -0.37
CHRNE-201ENST00000293780 PSMG4Q5JS54 123 aa12.77□□□□□ -0.37
CHRNE-201ENST00000293780 SAMD13Q5VXD3 122 aa12.77□□□□□ -0.37
CHRNE-201ENST00000293780 C14orf178Q8N769 122 aaPredicted RBP12.77□□□□□ -0.37
CHRNE-201ENST00000293780 RASL10AQ92737 203 aa12.77□□□□□ -0.37
CHRNE-201ENST00000293780 SMIM2Q9BVW6 85 aa12.77□□□□□ -0.37
CHRNE-201ENST00000293780 AGRNO00468 2067 aa12.76□□□□□ -0.37
CHRNE-201ENST00000293780 CLEC2AQ6UVW9 174 aa12.76□□□□□ -0.37
CHRNE-201ENST00000293780 LCNL1Q6ZST4 164 aa12.76□□□□□ -0.37
CHRNE-201ENST00000293780 LINC00477Q96M19 166 aa12.76□□□□□ -0.37
CHRNE-201ENST00000293780 NHP2Q9NX24 153 aaKnown RBP12.76□□□□□ -0.37
CHRNE-201ENST00000293780 SOCS3O14543 225 aa12.76□□□□□ -0.37
CHRNE-201ENST00000293780 IGHV4-39P01824 125 aa12.76□□□□□ -0.37
CHRNE-201ENST00000293780 RPL11P62913 178 aaKnown RBP12.76□□□□□ -0.37
CHRNE-201ENST00000293780 ANXA2RQ3ZCQ2 193 aa12.76□□□□□ -0.37
CHRNE-201ENST00000293780 CEND1Q8N111 149 aa12.76□□□□□ -0.37
CHRNE-201ENST00000293780 PHLDA1Q8WV24 401 aaPredicted RBP12.76□□□□□ -0.37
CHRNE-201ENST00000293780 MRAP2Q96G30 205 aa12.76□□□□□ -0.37
CHRNE-201ENST00000293780 GNRH2O43555 120 aa12.75□□□□□ -0.37
CHRNE-201ENST00000293780 S100A4P26447 101 aaKnown RBP12.75□□□□□ -0.37
CHRNE-201ENST00000293780 RNASE4P34096 147 aaKnown RBP12.75□□□□□ -0.37
CHRNE-201ENST00000293780 OR10J6PQ8NGY7 276 aa12.75□□□□□ -0.37
CHRNE-201ENST00000293780 IGHV1-69DA0A0B4J2H0 117 aa12.74□□□□□ -0.37
CHRNE-201ENST00000293780 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.74□□□□□ -0.37
CHRNE-201ENST00000293780 IGHV1-69P01742 117 aa12.74□□□□□ -0.37
CHRNE-201ENST00000293780 LENEPQ9Y5L5 61 aa12.74□□□□□ -0.37
CHRNE-201ENST00000293780 TRAV21A0A0B4J279 112 aa12.73□□□□□ -0.37
CHRNE-201ENST00000293780 SUMO2P61956 95 aaKnown RBP12.73□□□□□ -0.37
CHRNE-201ENST00000293780 Q6ZS46 218 aa12.73□□□□□ -0.37
CHRNE-201ENST00000293780 TM2D2Q9BX73 214 aa12.73□□□□□ -0.37
CHRNE-201ENST00000293780 PHLDA3Q9Y5J5 127 aa12.73□□□□□ -0.37
CHRNE-201ENST00000293780 NDUFA4O00483 81 aa12.73□□□□□ -0.37
CHRNE-201ENST00000293780 MGPP08493 103 aa12.73□□□□□ -0.37
CHRNE-201ENST00000293780 IGHV4-38-2P0DP08 117 aa12.73□□□□□ -0.37
CHRNE-201ENST00000293780 RNF223E7ERA6 249 aa12.72□□□□□ -0.37
CHRNE-201ENST00000293780 OVOL1O14753 267 aa12.72□□□□□ -0.37
CHRNE-201ENST00000293780 CRIP2P52943 208 aaPredicted RBP12.72□□□□□ -0.37
CHRNE-201ENST00000293780 SCGB3A1Q96QR1 104 aa12.72□□□□□ -0.37
CHRNE-201ENST00000293780 USP24Q9UPU5 2620 aa12.72□□□□□ -0.37
CHRNE-201ENST00000293780 IGHV4-61A0A0C4DH41 118 aa12.72□□□□□ -0.37
CHRNE-201ENST00000293780 H7C1H1 209 aa12.72□□□□□ -0.37
CHRNE-201ENST00000293780 SRD5A1P18405 259 aa12.72□□□□□ -0.37
CHRNE-201ENST00000293780 ASIPP42127 132 aa12.72□□□□□ -0.37
CHRNE-201ENST00000293780 ATP6V0BQ99437 205 aa12.72□□□□□ -0.37
CHRNE-201ENST00000293780 GTSF1LQ9H1H1 148 aa12.72□□□□□ -0.37
CHRNE-201ENST00000293780 F8VRH5 84 aa12.71□□□□□ -0.37
CHRNE-201ENST00000293780 HLA-DRB4P13762 266 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms