RNA–Protein interactions for RNA: ENST00000292779.3

CCDC116-201, Transcript of coiled-coil domain containing 116, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC116, Length 2,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116-201ENST00000292779 A6NDX4 124 aa11.47□□□□□ -0.57
CCDC116-201ENST00000292779 CCL25O15444 150 aa11.47□□□□□ -0.57
CCDC116-201ENST00000292779 MSMBP08118 114 aa11.47□□□□□ -0.57
CCDC116-201ENST00000292779 LEPP41159 167 aa11.47□□□□□ -0.57
CCDC116-201ENST00000292779 BLCAPP62952 87 aa11.47□□□□□ -0.57
CCDC116-201ENST00000292779 DPF1Q92782 380 aa11.47□□□□□ -0.57
CCDC116-201ENST00000292779 NPFFR1Q9GZQ6 430 aa11.47□□□□□ -0.57
CCDC116-201ENST00000292779 NXT2Q9NPJ8 142 aaKnown RBP11.47□□□□□ -0.57
CCDC116-201ENST00000292779 PTTG1IPP53801 180 aa11.46□□□□□ -0.57
CCDC116-201ENST00000292779 TCTAP57738 103 aa11.46□□□□□ -0.57
CCDC116-201ENST00000292779 Q6ZS46 218 aa11.46□□□□□ -0.57
CCDC116-201ENST00000292779 J3KRW8 73 aa11.46□□□□□ -0.58
CCDC116-201ENST00000292779 FGF6P10767 208 aa11.46□□□□□ -0.58
CCDC116-201ENST00000292779 TAX1BP3O14907 124 aa11.45□□□□□ -0.58
CCDC116-201ENST00000292779 AVPP01185 164 aa11.45□□□□□ -0.58
CCDC116-201ENST00000292779 PF4V1P10720 104 aa11.45□□□□□ -0.58
CCDC116-201ENST00000292779 FCER1GP30273 86 aa11.45□□□□□ -0.58
CCDC116-201ENST00000292779 DEFB1P60022 68 aa11.45□□□□□ -0.58
CCDC116-201ENST00000292779 LCNL1Q6ZST4 164 aa11.45□□□□□ -0.58
CCDC116-201ENST00000292779 OR1N2Q8NGR9 330 aa11.45□□□□□ -0.58
CCDC116-201ENST00000292779 USMG5Q96IX5 58 aa11.45□□□□□ -0.58
CCDC116-201ENST00000292779 DKK2Q9UBU2 259 aa11.45□□□□□ -0.58
CCDC116-201ENST00000292779 UFC1Q9Y3C8 167 aa11.45□□□□□ -0.58
CCDC116-201ENST00000292779 PRRC2AP48634 2157 aaKnown RBP11.45□□□□□ -0.58
CCDC116-201ENST00000292779 H3BUA1 57 aa11.44□□□□□ -0.58
CCDC116-201ENST00000292779 SOCS3O14543 225 aa11.44□□□□□ -0.58
CCDC116-201ENST00000292779 UBE2V1Q13404 147 aa11.44□□□□□ -0.58
CCDC116-201ENST00000292779 SPANXN1Q5VSR9 72 aa11.44□□□□□ -0.58
CCDC116-201ENST00000292779 SMIM15Q7Z3B0 74 aa11.44□□□□□ -0.58
CCDC116-201ENST00000292779 DEFB125Q8N687 156 aa11.44□□□□□ -0.58
CCDC116-201ENST00000292779 OR2K2Q8NGT1 345 aa11.44□□□□□ -0.58
CCDC116-201ENST00000292779 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.44□□□□□ -0.589e-8■■■■■ 27.8
CCDC116-201ENST00000292779 TRAV26-2A0A0B4J265 109 aa11.44□□□□□ -0.58
CCDC116-201ENST00000292779 H3BVH4 76 aa11.44□□□□□ -0.58
CCDC116-201ENST00000292779 BRI3O95415 125 aa11.44□□□□□ -0.58
CCDC116-201ENST00000292779 FOSL1P15407 271 aa11.44□□□□□ -0.58
CCDC116-201ENST00000292779 ERASQ7Z444 233 aa11.44□□□□□ -0.58
CCDC116-201ENST00000292779 OR4X2Q8NGF9 303 aa11.44□□□□□ -0.58
CCDC116-201ENST00000292779 LENEPQ9Y5L5 61 aa11.44□□□□□ -0.58
CCDC116-201ENST00000292779 IGLV2-18A0A075B6J9 118 aa11.43□□□□□ -0.58
CCDC116-201ENST00000292779 IGHV4-4A0A075B6R2 117 aa11.43□□□□□ -0.58
CCDC116-201ENST00000292779 Q8N8P6 123 aa11.43□□□□□ -0.58
CCDC116-201ENST00000292779 OR10J6PQ8NGY7 276 aa11.43□□□□□ -0.58
CCDC116-201ENST00000292779 LINC00477Q96M19 166 aa11.43□□□□□ -0.58
CCDC116-201ENST00000292779 CR1P17927 2039 aa11.43□□□□□ -0.58
CCDC116-201ENST00000292779 RPL11P62913 178 aaKnown RBP11.43□□□□□ -0.58
CCDC116-201ENST00000292779 ZFAND2AQ8N6M9 145 aa11.43□□□□□ -0.58
CCDC116-201ENST00000292779 NRACQ8N912 160 aa11.43□□□□□ -0.58
CCDC116-201ENST00000292779 TMEM158Q8WZ71 300 aa11.43□□□□□ -0.58
CCDC116-201ENST00000292779 OVOL1O14753 267 aa11.42□□□□□ -0.58
CCDC116-201ENST00000292779 BOD1L2Q8IYS8 172 aa11.42□□□□□ -0.58
CCDC116-201ENST00000292779 B4DSR2 109 aa11.42□□□□□ -0.58
CCDC116-201ENST00000292779 MAPK1IP1LQ8NDC0 245 aa11.42□□□□□ -0.58
CCDC116-201ENST00000292779 SELENOKQ9Y6D0 94 aa11.42□□□□□ -0.58
CCDC116-201ENST00000292779 MXRA5Q9NR99 2828 aa11.41□□□□□ -0.58
CCDC116-201ENST00000292779 CSPG4Q6UVK1 2322 aa11.41□□□□□ -0.58
CCDC116-201ENST00000292779 IGKV3-7A0A075B6H7 116 aa11.41□□□□□ -0.58
CCDC116-201ENST00000292779 TLN2Q9Y4G6 2542 aa11.41□□□□□ -0.58
CCDC116-201ENST00000292779 FLNAP21333 2647 aaKnown RBP11.41□□□□□ -0.58
CCDC116-201ENST00000292779 CBY3A6NI87 242 aa11.4□□□□□ -0.58
CCDC116-201ENST00000292779 F6UB75 175 aa11.4□□□□□ -0.58
CCDC116-201ENST00000292779 IGLV1-40P01703 118 aa11.4□□□□□ -0.58
CCDC116-201ENST00000292779 ODF1Q14990 250 aa11.4□□□□□ -0.58
CCDC116-201ENST00000292779 VAMP3Q15836 100 aa11.4□□□□□ -0.58
CCDC116-201ENST00000292779 TM4SF20Q53R12 229 aa11.4□□□□□ -0.58
CCDC116-201ENST00000292779 SPRY2O43597 315 aa11.4□□□□□ -0.58
CCDC116-201ENST00000292779 CD5LO43866 347 aa11.4□□□□□ -0.58
CCDC116-201ENST00000292779 PRSS1P07477 247 aa11.4□□□□□ -0.58
CCDC116-201ENST00000292779 TMEM97Q5BJF2 176 aa11.4□□□□□ -0.58
CCDC116-201ENST00000292779 RHPN1-AS1Q9BWJ2 59 aa11.4□□□□□ -0.58
CCDC116-201ENST00000292779 TRAV21A0A0B4J279 112 aa11.39□□□□□ -0.59
CCDC116-201ENST00000292779 PRSS47A8MTI9 375 aa11.39□□□□□ -0.59
CCDC116-201ENST00000292779 NMUP48645 174 aa11.39□□□□□ -0.59
CCDC116-201ENST00000292779 PCP2Q8IVA1 136 aa11.39□□□□□ -0.59
CCDC116-201ENST00000292779 A0A096LNT2 108 aa11.39□□□□□ -0.59
CCDC116-201ENST00000292779 A0A0G2JLM5 398 aa11.39□□□□□ -0.59
CCDC116-201ENST00000292779 ZMAT4Q9H898 229 aa11.39□□□□□ -0.59
CCDC116-201ENST00000292779 CREBBPQ92793 2442 aa11.38□□□□□ -0.59
CCDC116-201ENST00000292779 M0R381 172 aa11.38□□□□□ -0.59
CCDC116-201ENST00000292779 SMIM17P0DL12 118 aa11.38□□□□□ -0.59
CCDC116-201ENST00000292779 RNASE4P34096 147 aaKnown RBP11.38□□□□□ -0.59
CCDC116-201ENST00000292779 CFHR3Q02985 330 aa11.38□□□□□ -0.59
CCDC116-201ENST00000292779 LAGE3Q14657 143 aa11.38□□□□□ -0.59
CCDC116-201ENST00000292779 KRTAP1-3Q8IUG1 177 aa11.38□□□□□ -0.59
CCDC116-201ENST00000292779 FAM19A4Q96LR4 140 aa11.38□□□□□ -0.59
CCDC116-201ENST00000292779 EDN2P20800 178 aa11.38□□□□□ -0.59
CCDC116-201ENST00000292779 KIR3DS1Q14943 382 aa11.38□□□□□ -0.59
CCDC116-201ENST00000292779 TMEM95Q3KNT9 176 aa11.38□□□□□ -0.59
CCDC116-201ENST00000292779 ANXA2RQ3ZCQ2 193 aa11.38□□□□□ -0.59
CCDC116-201ENST00000292779 FOXC2Q99958 501 aa11.38□□□□□ -0.59
CCDC116-201ENST00000292779 DAZ1Q9NQZ3 744 aaKnown RBP11.38□□□□□ -0.59
CCDC116-201ENST00000292779 ACANP16112 2415 aa11.37□□□□□ -0.59
CCDC116-201ENST00000292779 SRD5A1P18405 259 aa11.37□□□□□ -0.59
CCDC116-201ENST00000292779 S100A4P26447 101 aaKnown RBP11.37□□□□□ -0.59
CCDC116-201ENST00000292779 OR9G4Q8NGQ1 327 aa11.37□□□□□ -0.59
CCDC116-201ENST00000292779 MRAP2Q96G30 205 aa11.37□□□□□ -0.59
CCDC116-201ENST00000292779 HHLA3Q9XRX5 114 aa11.37□□□□□ -0.59
CCDC116-201ENST00000292779 NOTCH2Q04721 2471 aa11.37□□□□□ -0.59
CCDC116-201ENST00000292779 ASIPP42127 132 aa11.37□□□□□ -0.59
CCDC116-201ENST00000292779 DSCR9P59020 149 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms