RNA–Protein interactions for RNA: ENST00000291300.8

HIF3A-203, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 5

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-203ENST00000291300 RNASEKQ6P5S7 137 aaKnown RBP12.47□□□□□ -0.41
HIF3A-203ENST00000291300 NIT1Q86X76 327 aa12.47□□□□□ -0.41
HIF3A-203ENST00000291300 TMEM160Q9NX00 188 aa12.47□□□□□ -0.41
HIF3A-203ENST00000291300 HIVEP1P15822 2718 aa12.47□□□□□ -0.41
HIF3A-203ENST00000291300 A0A1B0GW15 77 aa12.47□□□□□ -0.41
HIF3A-203ENST00000291300 AMTP48728 403 aa12.47□□□□□ -0.41
HIF3A-203ENST00000291300 PMCHL1Q16048 86 aa12.47□□□□□ -0.41
HIF3A-203ENST00000291300 CNFNQ9BYD5 112 aa12.47□□□□□ -0.41
HIF3A-203ENST00000291300 C16orf95Q9H693 158 aa12.47□□□□□ -0.41
HIF3A-203ENST00000291300 NIPBLQ6KC79 2804 aaeCLIP12.47□□□□□ -0.41
HIF3A-203ENST00000291300 SMKR1H3BMG3 65 aa12.46□□□□□ -0.41
HIF3A-203ENST00000291300 ZNF324O75467 553 aaPredicted RBP12.46□□□□□ -0.41
HIF3A-203ENST00000291300 GAS8-AS1O95177 125 aa12.46□□□□□ -0.41
HIF3A-203ENST00000291300 PAFAH1B2P68402 229 aa12.46□□□□□ -0.41
HIF3A-203ENST00000291300 ZNF124Q15973 351 aa12.46□□□□□ -0.41
HIF3A-203ENST00000291300 FAM104BQ5XKR9 115 aa12.46□□□□□ -0.41
HIF3A-203ENST00000291300 APRG1Q8IVJ8 170 aa12.46□□□□□ -0.41
HIF3A-203ENST00000291300 TMEM61Q8N0U2 210 aa12.46□□□□□ -0.41
HIF3A-203ENST00000291300 ZNF418Q8TF45 676 aaPredicted RBP12.46□□□□□ -0.41
HIF3A-203ENST00000291300 A0A0J9YX75 114 aa12.46□□□□□ -0.42
HIF3A-203ENST00000291300 H3BVH4 76 aa12.46□□□□□ -0.42
HIF3A-203ENST00000291300 ANXA2RQ3ZCQ2 193 aa12.46□□□□□ -0.42
HIF3A-203ENST00000291300 TIMM8BQ9Y5J9 83 aaPredicted RBP12.46□□□□□ -0.42
HIF3A-203ENST00000291300 KLLNB2CW77 178 aa12.45□□□□□ -0.42
HIF3A-203ENST00000291300 INAFM1C9JVW0 142 aa12.45□□□□□ -0.42
HIF3A-203ENST00000291300 D6R8Y8 96 aa12.45□□□□□ -0.42
HIF3A-203ENST00000291300 SNRPD3P62318 126 aaKnown RBP12.45□□□□□ -0.42
HIF3A-203ENST00000291300 MRPL51Q4U2R6 128 aaKnown RBP12.45□□□□□ -0.42
HIF3A-203ENST00000291300 RNF185Q96GF1 192 aa12.45□□□□□ -0.42
HIF3A-203ENST00000291300 GNRH2O43555 120 aa12.44□□□□□ -0.42
HIF3A-203ENST00000291300 NSD1Q96L73 2696 aaPredicted RBP12.44□□□□□ -0.42
HIF3A-203ENST00000291300 FN1P02751 2386 aaKnown RBP12.44□□□□□ -0.42
HIF3A-203ENST00000291300 TRAV12-2A0A075B6T6 113 aa12.44□□□□□ -0.42
HIF3A-203ENST00000291300 TRAV21A0A0B4J279 112 aa12.44□□□□□ -0.42
HIF3A-203ENST00000291300 M0R2Z0 102 aa12.44□□□□□ -0.42
HIF3A-203ENST00000291300 NCR2O95944 276 aa12.44□□□□□ -0.42
HIF3A-203ENST00000291300 FHL3Q13643 280 aa12.43□□□□□ -0.42
HIF3A-203ENST00000291300 SAMD13Q5VXD3 122 aa12.43□□□□□ -0.42
HIF3A-203ENST00000291300 PEMTQ9UBM1 199 aa12.43□□□□□ -0.42
HIF3A-203ENST00000291300 KNCNA6PVL3 124 aa12.43□□□□□ -0.42
HIF3A-203ENST00000291300 CCL24O00175 119 aa12.43□□□□□ -0.42
HIF3A-203ENST00000291300 U3KQK5 164 aa12.43□□□□□ -0.42
HIF3A-203ENST00000291300 TRAV12-3A0A0B4J271 114 aa12.42□□□□□ -0.42
HIF3A-203ENST00000291300 HSBP1O75506 76 aa12.42□□□□□ -0.42
HIF3A-203ENST00000291300 SCGB1D1O95968 90 aa12.42□□□□□ -0.42
HIF3A-203ENST00000291300 EVI2AP22794 236 aa12.42□□□□□ -0.42
HIF3A-203ENST00000291300 DEFB114Q30KQ6 69 aa12.42□□□□□ -0.42
HIF3A-203ENST00000291300 TMEM191AQ9H0A3 160 aa12.42□□□□□ -0.42
HIF3A-203ENST00000291300 SNAI2O43623 268 aa12.41□□□□□ -0.42
HIF3A-203ENST00000291300 RAB4AP20338 218 aa12.41□□□□□ -0.42
HIF3A-203ENST00000291300 DEFB131AP59861 70 aa12.41□□□□□ -0.42
HIF3A-203ENST00000291300 CD300EQ496F6 205 aaPredicted RBP12.41□□□□□ -0.42
HIF3A-203ENST00000291300 MUC4Q99102 2169 aa12.41□□□□□ -0.42
HIF3A-203ENST00000291300 TRBV7-9A0A0J9YWB2 115 aa12.41□□□□□ -0.42
HIF3A-203ENST00000291300 OR5AL1P0C617 328 aa12.41□□□□□ -0.42
HIF3A-203ENST00000291300 KRTAP10-3P60369 221 aa12.41□□□□□ -0.42
HIF3A-203ENST00000291300 SCGB2A2Q13296 93 aa12.41□□□□□ -0.42
HIF3A-203ENST00000291300 SPINK13Q1W4C9 94 aa12.41□□□□□ -0.42
HIF3A-203ENST00000291300 Q8N976 141 aa12.41□□□□□ -0.42
HIF3A-203ENST00000291300 ADARB2-AS1A8MUL3 147 aa12.4□□□□□ -0.42
HIF3A-203ENST00000291300 GATA1P15976 413 aaPredicted RBP12.4□□□□□ -0.42
HIF3A-203ENST00000291300 FXYD7P58549 80 aa12.4□□□□□ -0.42
HIF3A-203ENST00000291300 KRTDAPP60985 99 aa12.4□□□□□ -0.42
HIF3A-203ENST00000291300 LOC389332A0A1B0GUA5 103 aa12.4□□□□□ -0.43
HIF3A-203ENST00000291300 NPYP01303 97 aa12.4□□□□□ -0.43
HIF3A-203ENST00000291300 LINC00614P0C842 121 aa12.4□□□□□ -0.43
HIF3A-203ENST00000291300 RNASE3P12724 160 aaKnown RBP12.4□□□□□ -0.43
HIF3A-203ENST00000291300 PROK1P58294 105 aa12.4□□□□□ -0.43
HIF3A-203ENST00000291300 DMRTA1Q5VZB9 504 aa12.4□□□□□ -0.43
HIF3A-203ENST00000291300 EBLN2Q6P2I7 272 aa12.4□□□□□ -0.43
HIF3A-203ENST00000291300 AMTNQ6UX39 209 aa12.4□□□□□ -0.43
HIF3A-203ENST00000291300 LINC00173Q6ZV60 143 aa12.4□□□□□ -0.43
HIF3A-203ENST00000291300 DYNLRB2Q8TF09 96 aa12.4□□□□□ -0.43
HIF3A-203ENST00000291300 PRELID3AQ96N28 172 aa12.4□□□□□ -0.43
HIF3A-203ENST00000291300 PRO1933Q9H354 126 aa12.4□□□□□ -0.43
HIF3A-203ENST00000291300 TSSC4Q9Y5U2 329 aaPredicted RBP12.4□□□□□ -0.43
HIF3A-203ENST00000291300 IGHV1-24A0A0C4DH33 117 aa12.39□□□□□ -0.43
HIF3A-203ENST00000291300 TDRG1Q3Y452 100 aa12.39□□□□□ -0.43
HIF3A-203ENST00000291300 RBMY1BA6NDE4 496 aaKnown RBP12.38□□□□□ -0.43
HIF3A-203ENST00000291300 RBMY1EA6NEQ0 496 aaKnown RBP12.38□□□□□ -0.43
HIF3A-203ENST00000291300 LINC00587B1AMM8 73 aa12.38□□□□□ -0.43
HIF3A-203ENST00000291300 RBMY1DP0C7P1 496 aaKnown RBP12.38□□□□□ -0.43
HIF3A-203ENST00000291300 IFI27P40305 119 aaPredicted RBP12.38□□□□□ -0.43
HIF3A-203ENST00000291300 DNLZQ5SXM8 178 aa12.38□□□□□ -0.43
HIF3A-203ENST00000291300 SPANXN1Q5VSR9 72 aa12.38□□□□□ -0.43
HIF3A-203ENST00000291300 ORMDL3Q8N138 153 aa12.38□□□□□ -0.43
HIF3A-203ENST00000291300 C7orf71A4D174 169 aa12.38□□□□□ -0.43
HIF3A-203ENST00000291300 C3orf79P0CE67 100 aa12.38□□□□□ -0.43
HIF3A-203ENST00000291300 CKS2P33552 79 aa12.38□□□□□ -0.43
HIF3A-203ENST00000291300 FOXI2Q6ZQN5 318 aa12.38□□□□□ -0.43
HIF3A-203ENST00000291300 IGHV4-4A0A075B6R2 117 aa12.37□□□□□ -0.43
HIF3A-203ENST00000291300 TRAV26-2A0A0B4J265 109 aa12.37□□□□□ -0.43
HIF3A-203ENST00000291300 M0R381 172 aa12.37□□□□□ -0.43
HIF3A-203ENST00000291300 NDUFA7O95182 113 aa12.37□□□□□ -0.43
HIF3A-203ENST00000291300 ASIPP42127 132 aa12.37□□□□□ -0.43
HIF3A-203ENST00000291300 ZNF664Q8N3J9 261 aa12.37□□□□□ -0.43
HIF3A-203ENST00000291300 SIGLEC8Q9NYZ4 499 aa12.37□□□□□ -0.43
HIF3A-203ENST00000291300 C2CD3Q4AC94 2353 aa12.37□□□□□ -0.43
HIF3A-203ENST00000291300 RBMY1A1P0DJD3 496 aaKnown RBP12.37□□□□□ -0.43
HIF3A-203ENST00000291300 RBMY1CP0DJD4 496 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms