RNA–Protein interactions for RNA: ENST00000289448.2

HMHB1-201, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HMHB1, Length 384 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-201ENST00000289448 C7orf71A4D174 169 aa6.63□□□□□ -1.35
HMHB1-201ENST00000289448 KLLNB2CW77 178 aa6.63□□□□□ -1.35
HMHB1-201ENST00000289448 TMEM250H0YL14 139 aa6.63□□□□□ -1.35
HMHB1-201ENST00000289448 IGKV2D-40P01614 121 aaPredicted RBP6.63□□□□□ -1.35
HMHB1-201ENST00000289448 OR5I1Q13606 314 aa6.63□□□□□ -1.35
HMHB1-201ENST00000289448 PDE6HQ13956 83 aa6.63□□□□□ -1.35
HMHB1-201ENST00000289448 PRR9Q5T870 116 aa6.63□□□□□ -1.35
HMHB1-201ENST00000289448 Q6ZTI0 123 aa6.63□□□□□ -1.35
HMHB1-201ENST00000289448 C11orf72Q8NBR9 251 aa6.63□□□□□ -1.35
HMHB1-201ENST00000289448 DNAH5Q8TE73 4624 aa6.63□□□□□ -1.35
HMHB1-201ENST00000289448 VGLL1Q99990 258 aa6.63□□□□□ -1.35
HMHB1-201ENST00000289448 PYGO2Q9BRQ0 406 aa6.63□□□□□ -1.35
HMHB1-201ENST00000289448 GSN-AS1Q9NRJ2 163 aa6.63□□□□□ -1.35
HMHB1-201ENST00000289448 SNURFLB1AK76 121 aa6.62□□□□□ -1.35
HMHB1-201ENST00000289448 PAGE4O60829 102 aa6.62□□□□□ -1.35
HMHB1-201ENST00000289448 SLC25A5P05141 298 aaKnown RBP6.62□□□□□ -1.35
HMHB1-201ENST00000289448 OR10J4P0C629 311 aa6.62□□□□□ -1.35
HMHB1-201ENST00000289448 NBEAP1P0C6P0 100 aa6.62□□□□□ -1.35
HMHB1-201ENST00000289448 MED14OSP0DP75 135 aa6.62□□□□□ -1.35
HMHB1-201ENST00000289448 CRISP2P16562 243 aa6.62□□□□□ -1.35
HMHB1-201ENST00000289448 RNASE4P34096 147 aaKnown RBP6.62□□□□□ -1.35
HMHB1-201ENST00000289448 CCL18P55774 89 aa6.62□□□□□ -1.35
HMHB1-201ENST00000289448 TNP2Q05952 138 aa6.62□□□□□ -1.35
HMHB1-201ENST00000289448 DAZ2Q13117 558 aaKnown RBP6.62□□□□□ -1.35
HMHB1-201ENST00000289448 C9orf47Q6ZRZ4 202 aa6.62□□□□□ -1.35
HMHB1-201ENST00000289448 ZNF575Q86XF7 245 aa6.62□□□□□ -1.35
HMHB1-201ENST00000289448 ZFAND2AQ8N6M9 145 aa6.62□□□□□ -1.35
HMHB1-201ENST00000289448 CYB561D1Q8N8Q1 229 aa6.62□□□□□ -1.35
HMHB1-201ENST00000289448 CLRN3Q8NCR9 226 aa6.62□□□□□ -1.35
HMHB1-201ENST00000289448 FXYD5Q96DB9 178 aa6.62□□□□□ -1.35
HMHB1-201ENST00000289448 ZNF503Q96F45 646 aa6.62□□□□□ -1.35
HMHB1-201ENST00000289448 LINC00477Q96M19 166 aa6.62□□□□□ -1.35
HMHB1-201ENST00000289448 NKX6-2Q9C056 277 aaPredicted RBP6.62□□□□□ -1.35
HMHB1-201ENST00000289448 TP53TG3Q9ULZ0 132 aa6.62□□□□□ -1.35
HMHB1-201ENST00000289448 PRELID1Q9Y255 219 aa6.62□□□□□ -1.35
HMHB1-201ENST00000289448 APOBP04114 4563 aaKnown RBP6.62□□□□□ -1.35
HMHB1-201ENST00000289448 F6UZH7 168 aa6.61□□□□□ -1.35
HMHB1-201ENST00000289448 PDE6DO43924 150 aa6.61□□□□□ -1.35
HMHB1-201ENST00000289448 OR7C2O60412 319 aa6.61□□□□□ -1.35
HMHB1-201ENST00000289448 SCO1O75880 301 aa6.61□□□□□ -1.35
HMHB1-201ENST00000289448 ESRGQ1W209 222 aa6.61□□□□□ -1.35
HMHB1-201ENST00000289448 FAM74A3Q4VXF1 159 aa6.61□□□□□ -1.35
HMHB1-201ENST00000289448 CST9LP1Q5W188 147 aa6.61□□□□□ -1.35
HMHB1-201ENST00000289448 VSIG2Q96IQ7 327 aa6.61□□□□□ -1.35
HMHB1-201ENST00000289448 LINC00467Q9BRT7 94 aa6.61□□□□□ -1.35
HMHB1-201ENST00000289448 PAXXQ9BUH6 204 aa6.61□□□□□ -1.35
HMHB1-201ENST00000289448 KRTAP1-5Q9BYS1 174 aa6.61□□□□□ -1.35
HMHB1-201ENST00000289448 OR51M1Q9H341 326 aa6.61□□□□□ -1.35
HMHB1-201ENST00000289448 KLF12Q9Y4X4 402 aa6.61□□□□□ -1.35
HMHB1-201ENST00000289448 FAM74A7A6NL05 159 aa6.6□□□□□ -1.35
HMHB1-201ENST00000289448 M0R036 132 aa6.6□□□□□ -1.35
HMHB1-201ENST00000289448 CEBPGP53567 150 aa6.6□□□□□ -1.35
HMHB1-201ENST00000289448 UBE2G2P60604 165 aa6.6□□□□□ -1.35
HMHB1-201ENST00000289448 UBE2L3P68036 154 aaKnown RBP6.6□□□□□ -1.35
HMHB1-201ENST00000289448 RHEBQ15382 184 aa6.6□□□□□ -1.35
HMHB1-201ENST00000289448 ANXA2RQ3ZCQ2 193 aa6.6□□□□□ -1.35
HMHB1-201ENST00000289448 ATRAIDQ6UW56 229 aa6.6□□□□□ -1.35
HMHB1-201ENST00000289448 C6orf223Q8N319 242 aa6.6□□□□□ -1.35
HMHB1-201ENST00000289448 Q8TAT8 98 aa6.6□□□□□ -1.35
HMHB1-201ENST00000289448 AAMDCQ9H7C9 122 aa6.6□□□□□ -1.35
HMHB1-201ENST00000289448 Q9H8V8 135 aa6.6□□□□□ -1.35
HMHB1-201ENST00000289448 ZNF492Q9P255 531 aa6.6□□□□□ -1.35
HMHB1-201ENST00000289448 TRGV1A0A0A0MS02 117 aa6.59□□□□□ -1.35
HMHB1-201ENST00000289448 A0A1W2PRE2 83 aa6.59□□□□□ -1.35
HMHB1-201ENST00000289448 ZNF727A8MUV8 499 aa6.59□□□□□ -1.35
HMHB1-201ENST00000289448 GPX1P07203 203 aa6.59□□□□□ -1.35
HMHB1-201ENST00000289448 TCL1AP56279 114 aa6.59□□□□□ -1.35
HMHB1-201ENST00000289448 RANP62826 216 aaKnown RBP6.59□□□□□ -1.35
HMHB1-201ENST00000289448 PNRC1Q12796 327 aaPredicted RBP6.59□□□□□ -1.35
HMHB1-201ENST00000289448 TMEM78Q5T7P6 136 aa6.59□□□□□ -1.35
HMHB1-201ENST00000289448 TVP23CQ96ET8 276 aa6.59□□□□□ -1.35
HMHB1-201ENST00000289448 C18orf15Q96N68 181 aa6.59□□□□□ -1.35
HMHB1-201ENST00000289448 SMIM7Q9BQ49 75 aa6.59□□□□□ -1.35
HMHB1-201ENST00000289448 TRGV2A0A075B6R0 118 aa6.58□□□□□ -1.36
HMHB1-201ENST00000289448 A0A096LPF7 62 aa6.58□□□□□ -1.36
HMHB1-201ENST00000289448 C7orf77A4D0Y5 90 aa6.58□□□□□ -1.36
HMHB1-201ENST00000289448 H3BNG1 76 aa6.58□□□□□ -1.36
HMHB1-201ENST00000289448 SPINK4O60575 86 aa6.58□□□□□ -1.36
HMHB1-201ENST00000289448 ZNF138P52744 262 aa6.58□□□□□ -1.36
HMHB1-201ENST00000289448 C11orf52Q96A22 123 aa6.58□□□□□ -1.36
HMHB1-201ENST00000289448 TCEAL7Q9BRU2 100 aa6.58□□□□□ -1.36
HMHB1-201ENST00000289448 UPK3BQ9BT76 320 aa6.58□□□□□ -1.36
HMHB1-201ENST00000289448 PARLQ9H300 379 aa6.58□□□□□ -1.36
HMHB1-201ENST00000289448 Q9H3A6 140 aa6.58□□□□□ -1.36
HMHB1-201ENST00000289448 NAT8Q9UHE5 227 aa6.58□□□□□ -1.36
HMHB1-201ENST00000289448 IGHV1OR15-1A0A075B7D0 117 aa6.57□□□□□ -1.36
HMHB1-201ENST00000289448 B4DEV8 164 aa6.57□□□□□ -1.36
HMHB1-201ENST00000289448 IGHV3-53P01767 116 aa6.57□□□□□ -1.36
HMHB1-201ENST00000289448 TMEM241Q24JQ0 296 aa6.57□□□□□ -1.36
HMHB1-201ENST00000289448 ZNF674Q2M3X9 581 aa6.57□□□□□ -1.36
HMHB1-201ENST00000289448 IBA57Q5T440 356 aaKnown RBP6.57□□□□□ -1.36
HMHB1-201ENST00000289448 KRTAP4-5Q9BYR2 181 aa6.57□□□□□ -1.36
HMHB1-201ENST00000289448 RPS10P5Q9NQ39 176 aa6.57□□□□□ -1.36
HMHB1-201ENST00000289448 SMCO4Q9NRQ5 59 aa6.57□□□□□ -1.36
HMHB1-201ENST00000289448 MRPL16Q9NX20 251 aaKnown RBP6.57□□□□□ -1.36
HMHB1-201ENST00000289448 MRPS16Q9Y3D3 137 aaKnown RBP6.57□□□□□ -1.36
HMHB1-201ENST00000289448 A0A087WWC5 75 aa6.56□□□□□ -1.36
HMHB1-201ENST00000289448 TRBV7-9A0A0J9YWB2 115 aa6.56□□□□□ -1.36
HMHB1-201ENST00000289448 SCO2A0A1W2PP80 73 aa6.56□□□□□ -1.36
HMHB1-201ENST00000289448 RBAKDNA6NC62 111 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms