RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 ZNF491Q8N8L2 437 aa13.83□□□□□ -0.2
PCDHA13-201ENST00000289272 CACNA1HO95180 2353 aa13.82□□□□□ -0.2
PCDHA13-201ENST00000289272 BRD3OSQ6XYD6 125 aa13.82□□□□□ -0.2
PCDHA13-201ENST00000289272 A0A087WWL8 130 aa13.82□□□□□ -0.2
PCDHA13-201ENST00000289272 NDUFA4O00483 81 aa13.82□□□□□ -0.2
PCDHA13-201ENST00000289272 NSUN5P1Q3KNT7 163 aa13.82□□□□□ -0.2
PCDHA13-201ENST00000289272 C2orf16Q68DN1 1984 aa13.82□□□□□ -0.2
PCDHA13-201ENST00000289272 A0A0B4J2C4 111 aa13.82□□□□□ -0.2
PCDHA13-201ENST00000289272 FXYD2P54710 66 aa13.82□□□□□ -0.2
PCDHA13-201ENST00000289272 PIP4P2Q8N4L2 257 aa13.82□□□□□ -0.2
PCDHA13-201ENST00000289272 WFDC2Q14508 124 aa13.82□□□□□ -0.2
PCDHA13-201ENST00000289272 MORN5Q5VZ52 161 aa13.82□□□□□ -0.2
PCDHA13-201ENST00000289272 LINC00527Q9UJ94 153 aa13.82□□□□□ -0.2
PCDHA13-201ENST00000289272 IGHV1-69P01742 117 aa13.81□□□□□ -0.2
PCDHA13-201ENST00000289272 J3QKU1 62 aa13.81□□□□□ -0.2
PCDHA13-201ENST00000289272 KAAG1Q9UBP8 84 aa13.81□□□□□ -0.2
PCDHA13-201ENST00000289272 A0A1B0GXF2 115 aa13.81□□□□□ -0.2
PCDHA13-201ENST00000289272 HERV-K104P63124 156 aa13.81□□□□□ -0.2
PCDHA13-201ENST00000289272 SS18Q15532 418 aa13.81□□□□□ -0.2
PCDHA13-201ENST00000289272 FAM215AQ9Y5M1 114 aa13.81□□□□□ -0.2
PCDHA13-201ENST00000289272 SHANK1Q9Y566 2161 aa13.8□□□□□ -0.2
PCDHA13-201ENST00000289272 E9PLD3 99 aa13.8□□□□□ -0.2
PCDHA13-201ENST00000289272 IGFL4Q6B9Z1 124 aa13.8□□□□□ -0.2
PCDHA13-201ENST00000289272 FAM167A-AS1Q96KT0 104 aa13.8□□□□□ -0.2
PCDHA13-201ENST00000289272 LOXP28300 417 aaPredicted RBP13.8□□□□□ -0.2
PCDHA13-201ENST00000289272 YLPM1P49750 1951 aaKnown RBP13.8□□□□□ -0.2
PCDHA13-201ENST00000289272 H3BQ85 93 aa13.8□□□□□ -0.2
PCDHA13-201ENST00000289272 SYNJ2BPP57105 145 aa13.8□□□□□ -0.2
PCDHA13-201ENST00000289272 LINC01620Q4KN68 170 aa13.8□□□□□ -0.2
PCDHA13-201ENST00000289272 LINC00173Q6ZV60 143 aa13.8□□□□□ -0.2
PCDHA13-201ENST00000289272 C11orf53Q8IXP5 236 aa13.8□□□□□ -0.2
PCDHA13-201ENST00000289272 IGHV1OR15-1A0A075B7D0 117 aa13.8□□□□□ -0.2
PCDHA13-201ENST00000289272 TRAV26-1A0A087WT03 109 aa13.8□□□□□ -0.2
PCDHA13-201ENST00000289272 EGR2P11161 476 aaPredicted RBP13.79□□□□□ -0.2
PCDHA13-201ENST00000289272 IGFBPL1Q8WX77 278 aa13.79□□□□□ -0.2
PCDHA13-201ENST00000289272 KIAA1549LQ6ZVL6 1849 aa13.79□□□□□ -0.2
PCDHA13-201ENST00000289272 MED14OSP0DP75 135 aa13.79□□□□□ -0.2
PCDHA13-201ENST00000289272 TRBV10-2A0A0K0K1G8 114 aa13.79□□□□□ -0.2
PCDHA13-201ENST00000289272 LY6HO94772 140 aa13.79□□□□□ -0.2
PCDHA13-201ENST00000289272 C1orf159Q96HA4 380 aa13.79□□□□□ -0.2
PCDHA13-201ENST00000289272 DOCK11Q5JSL3 2073 aa13.79□□□□□ -0.2
PCDHA13-201ENST00000289272 ANXA2RQ3ZCQ2 193 aa13.78□□□□□ -0.2
PCDHA13-201ENST00000289272 C19orf71A6NCJ1 209 aa13.77□□□□□ -0.2
PCDHA13-201ENST00000289272 NDPQ00604 133 aa13.77□□□□□ -0.2
PCDHA13-201ENST00000289272 CADP27708 2225 aa13.77□□□□□ -0.2
PCDHA13-201ENST00000289272 WNK2Q9Y3S1 2297 aa13.77□□□□□ -0.2
PCDHA13-201ENST00000289272 TRAV26-2A0A0B4J265 109 aa13.77□□□□□ -0.21
PCDHA13-201ENST00000289272 H3BUA1 57 aa13.77□□□□□ -0.21
PCDHA13-201ENST00000289272 GTSF1Q8WW33 167 aa13.77□□□□□ -0.21
PCDHA13-201ENST00000289272 COL6A6A6NMZ7 2263 aa13.77□□□□□ -0.21
PCDHA13-201ENST00000289272 NBASA2RRP1 2371 aa13.77□□□□□ -0.21
PCDHA13-201ENST00000289272 P0C879 139 aa13.77□□□□□ -0.21
PCDHA13-201ENST00000289272 CR1LQ2VPA4 569 aa13.77□□□□□ -0.21
PCDHA13-201ENST00000289272 H0YGX0 51 aa13.76□□□□□ -0.21
PCDHA13-201ENST00000289272 KLHL30-AS1Q8NEE0 82 aa13.76□□□□□ -0.21
PCDHA13-201ENST00000289272 NDUFC2O95298 119 aa13.76□□□□□ -0.21
PCDHA13-201ENST00000289272 RNF223E7ERA6 249 aa13.75□□□□□ -0.21
PCDHA13-201ENST00000289272 TOMM6Q96B49 74 aa13.75□□□□□ -0.21
PCDHA13-201ENST00000289272 TRAV13-1A0A0B4J241 112 aa13.75□□□□□ -0.21
PCDHA13-201ENST00000289272 ODF1Q14990 250 aa13.75□□□□□ -0.21
PCDHA13-201ENST00000289272 ICOSQ9Y6W8 199 aa13.75□□□□□ -0.21
PCDHA13-201ENST00000289272 BAALC-AS2P0C853 105 aa13.74□□□□□ -0.21
PCDHA13-201ENST00000289272 DOCK10Q96BY6 2186 aa13.74□□□□□ -0.21
PCDHA13-201ENST00000289272 TIMM17AQ99595 171 aa13.74□□□□□ -0.21
PCDHA13-201ENST00000289272 TM2D2Q9BX73 214 aa13.74□□□□□ -0.21
PCDHA13-201ENST00000289272 C11orf86A6NJI1 115 aa13.74□□□□□ -0.21
PCDHA13-201ENST00000289272 TRGV1A0A0A0MS02 117 aa13.74□□□□□ -0.21
PCDHA13-201ENST00000289272 PATE2Q6UY27 113 aa13.73□□□□□ -0.21
PCDHA13-201ENST00000289272 Q6ZUT4 128 aa13.72□□□□□ -0.21
PCDHA13-201ENST00000289272 TPSG1Q9NRR2 321 aa13.72□□□□□ -0.21
PCDHA13-201ENST00000289272 IGLV2-14P01704 120 aa13.72□□□□□ -0.21
PCDHA13-201ENST00000289272 C11orf44Q8N8P7 122 aa13.72□□□□□ -0.21
PCDHA13-201ENST00000289272 PCNX1Q96RV3 2341 aa13.71□□□□□ -0.21
PCDHA13-201ENST00000289272 IGHV3-73A0A0B4J1V6 119 aa13.71□□□□□ -0.21
PCDHA13-201ENST00000289272 SPANXB1Q9NS25 103 aaPredicted RBP13.71□□□□□ -0.21
PCDHA13-201ENST00000289272 ATP6V0E1O15342 81 aa13.71□□□□□ -0.21
PCDHA13-201ENST00000289272 ORMDL1Q9P0S3 153 aa13.71□□□□□ -0.21
PCDHA13-201ENST00000289272 CFHR4Q92496 578 aa13.71□□□□□ -0.22
PCDHA13-201ENST00000289272 USF3Q68DE3 2245 aa13.7□□□□□ -0.22
PCDHA13-201ENST00000289272 DSCR8Q96T75 97 aa13.7□□□□□ -0.22
PCDHA13-201ENST00000289272 ALPK3Q96L96 1907 aa13.7□□□□□ -0.22
PCDHA13-201ENST00000289272 ODF3L1Q8IXM7 274 aa13.7□□□□□ -0.22
PCDHA13-201ENST00000289272 I3L2K1 104 aa13.7□□□□□ -0.22
PCDHA13-201ENST00000289272 DIAPH2-AS1Q14236 149 aa13.7□□□□□ -0.22
PCDHA13-201ENST00000289272 A4D1N5 150 aa13.7□□□□□ -0.22
PCDHA13-201ENST00000289272 LHBP01229 141 aa13.7□□□□□ -0.22
PCDHA13-201ENST00000289272 ZNF625Q96I27 306 aaPredicted RBP13.7□□□□□ -0.22
PCDHA13-201ENST00000289272 Q96MF0 132 aa13.7□□□□□ -0.22
PCDHA13-201ENST00000289272 AGPAT4-IT1Q9H0P7 198 aa13.7□□□□□ -0.22
PCDHA13-201ENST00000289272 KMT2EQ8IZD2 1858 aa13.69□□□□□ -0.22
PCDHA13-201ENST00000289272 TNRC6AQ8NDV7 1962 aaKnown RBP13.69□□□□□ -0.22
PCDHA13-201ENST00000289272 DYNAPQ8N1N2 210 aa13.69□□□□□ -0.22
PCDHA13-201ENST00000289272 F8WEM9 126 aa13.69□□□□□ -0.22
PCDHA13-201ENST00000289272 LINC01619G3V211 115 aa13.69□□□□□ -0.22
PCDHA13-201ENST00000289272 LINC00643Q86TS7 51 aa13.69□□□□□ -0.22
PCDHA13-201ENST00000289272 FAM236AA0A1B0GUQ0 79 aa13.69□□□□□ -0.22
PCDHA13-201ENST00000289272 FAM236BA0A1B0GV22 79 aa13.69□□□□□ -0.22
PCDHA13-201ENST00000289272 MBD6Q96DN6 1003 aa13.69□□□□□ -0.22
PCDHA13-201ENST00000289272 GTF3C1Q12789 2109 aa13.69□□□□□ -0.22
PCDHA13-201ENST00000289272 TMEM243Q9BU79 118 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms