RNA–Protein interactions for RNA: ENST00000287814.4

TIMP4-201, Transcript of TIMP metallopeptidase inhibitor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4-201ENST00000287814 ZC2HC1AQ96GY0 325 aa14.04□□□□□ -0.16
TIMP4-201ENST00000287814 ZFP30Q9Y2G7 519 aa14.04□□□□□ -0.16
TIMP4-201ENST00000287814 COX8CQ7Z4L0 72 aa14.04□□□□□ -0.16
TIMP4-201ENST00000287814 LYSTQ99698 3801 aa14.03□□□□□ -0.16
TIMP4-201ENST00000287814 SACSQ9NZJ4 4579 aa14.03□□□□□ -0.16
TIMP4-201ENST00000287814 TYMSP04818 313 aa14.03□□□□□ -0.16
TIMP4-201ENST00000287814 BCL2P10415 239 aa14.03□□□□□ -0.16
TIMP4-201ENST00000287814 C11orf52Q96A22 123 aa14.03□□□□□ -0.16
TIMP4-201ENST00000287814 DERL1Q9BUN8 251 aa14.03□□□□□ -0.16
TIMP4-201ENST00000287814 APLNQ9ULZ1 77 aa14.03□□□□□ -0.16
TIMP4-201ENST00000287814 SPINK4O60575 86 aa14.02□□□□□ -0.16
TIMP4-201ENST00000287814 MEF2BQ02080 365 aaPredicted RBP14.02□□□□□ -0.16
TIMP4-201ENST00000287814 TRGV11A0A075B6L2 103 aa14.01□□□□□ -0.17
TIMP4-201ENST00000287814 IGHV4-4A0A075B6R2 117 aa14.01□□□□□ -0.17
TIMP4-201ENST00000287814 IGHV3-16A0A0C4DH30 117 aa14.01□□□□□ -0.17
TIMP4-201ENST00000287814 LCE6AA0A183 80 aa14.01□□□□□ -0.17
TIMP4-201ENST00000287814 IFNA1P01562 189 aa14.01□□□□□ -0.17
TIMP4-201ENST00000287814 ZNF415Q09FC8 603 aa14.01□□□□□ -0.17
TIMP4-201ENST00000287814 TEX261Q6UWH6 196 aa14.01□□□□□ -0.17
TIMP4-201ENST00000287814 NHLRC2Q8NBF2 726 aa14.01□□□□□ -0.17
TIMP4-201ENST00000287814 TXNDC17Q9BRA2 123 aa14.01□□□□□ -0.17
TIMP4-201ENST00000287814 TRGV1A0A0A0MS02 117 aa14.01□□□□□ -0.17
TIMP4-201ENST00000287814 FABP5P3A8MUU1 101 aa14.01□□□□□ -0.17
TIMP4-201ENST00000287814 SDF2L1Q9HCN8 221 aa14.01□□□□□ -0.17
TIMP4-201ENST00000287814 MRPL16Q9NX20 251 aaKnown RBP14.01□□□□□ -0.17
TIMP4-201ENST00000287814 VAX2Q9UIW0 290 aa14.01□□□□□ -0.17
TIMP4-201ENST00000287814 IGKV3D-20A0A0C4DH25 116 aa14□□□□□ -0.17
TIMP4-201ENST00000287814 ATP5G1P05496 136 aa14□□□□□ -0.17
TIMP4-201ENST00000287814 S100A9P06702 114 aaKnown RBP14□□□□□ -0.17
TIMP4-201ENST00000287814 RPL35P42766 123 aaKnown RBP14□□□□□ -0.17
TIMP4-201ENST00000287814 KCNS1Q96KK3 526 aa14□□□□□ -0.17
TIMP4-201ENST00000287814 MLST8Q9BVC4 326 aa14□□□□□ -0.17
TIMP4-201ENST00000287814 RYR3Q15413 4870 aa14□□□□□ -0.17
TIMP4-201ENST00000287814 BAGE2Q86Y30 109 aa13.99□□□□□ -0.17
TIMP4-201ENST00000287814 F5H768 121 aa13.98□□□□□ -0.17
TIMP4-201ENST00000287814 SH2D1AO60880 128 aa13.98□□□□□ -0.17
TIMP4-201ENST00000287814 ZNF575Q86XF7 245 aa13.98□□□□□ -0.17
TIMP4-201ENST00000287814 PCNPQ8WW12 178 aaKnown RBP13.98□□□□□ -0.17
TIMP4-201ENST00000287814 PDE6DO43924 150 aa13.98□□□□□ -0.17
TIMP4-201ENST00000287814 ZNF674Q2M3X9 581 aa13.98□□□□□ -0.17
TIMP4-201ENST00000287814 LGALS9BQ3B8N2 356 aa13.98□□□□□ -0.17
TIMP4-201ENST00000287814 TMEM88Q6PEY1 159 aa13.98□□□□□ -0.17
TIMP4-201ENST00000287814 TRGV2A0A075B6R0 118 aa13.97□□□□□ -0.17
TIMP4-201ENST00000287814 HOXA5P20719 270 aa13.97□□□□□ -0.17
TIMP4-201ENST00000287814 FAM162BQ5T6X4 162 aa13.97□□□□□ -0.17
TIMP4-201ENST00000287814 RAB19A4D1S5 217 aa13.96□□□□□ -0.17
TIMP4-201ENST00000287814 RBFOX3A6NFN3 312 aa13.96□□□□□ -0.17
TIMP4-201ENST00000287814 TCTAP57738 103 aa13.96□□□□□ -0.17
TIMP4-201ENST00000287814 LINC00476Q8WZB0 136 aa13.96□□□□□ -0.17
TIMP4-201ENST00000287814 C18orf15Q96N68 181 aa13.96□□□□□ -0.17
TIMP4-201ENST00000287814 SPXQ9BT56 116 aa13.96□□□□□ -0.17
TIMP4-201ENST00000287814 MED9Q9NWA0 146 aa13.96□□□□□ -0.17
TIMP4-201ENST00000287814 DNAH1Q9P2D7 4330 aa13.96□□□□□ -0.17
TIMP4-201ENST00000287814 RYR2Q92736 4967 aa13.96□□□□□ -0.18
TIMP4-201ENST00000287814 M0R036 132 aa13.95□□□□□ -0.18
TIMP4-201ENST00000287814 ORM1P02763 201 aa13.95□□□□□ -0.18
TIMP4-201ENST00000287814 RNASE3P12724 160 aaKnown RBP13.95□□□□□ -0.18
TIMP4-201ENST00000287814 TAGLN2P37802 199 aaKnown RBP13.95□□□□□ -0.18
TIMP4-201ENST00000287814 NDUFAF3Q9BU61 184 aa13.95□□□□□ -0.18
TIMP4-201ENST00000287814 HYDINQ4G0P3 5121 aa13.95□□□□□ -0.18
TIMP4-201ENST00000287814 IGLV2-8P01709 118 aa13.95□□□□□ -0.18
TIMP4-201ENST00000287814 CENPWQ5EE01 88 aa13.95□□□□□ -0.18
TIMP4-201ENST00000287814 RASL10AQ92737 203 aa13.95□□□□□ -0.18
TIMP4-201ENST00000287814 FAM210BQ96KR6 192 aa13.95□□□□□ -0.18
TIMP4-201ENST00000287814 ALMS1Q8TCU4 4167 aa13.94□□□□□ -0.18
TIMP4-201ENST00000287814 TRBV20OR9-2A0A075B6H5 130 aa13.94□□□□□ -0.18
TIMP4-201ENST00000287814 KRBOX1C9JBD0 128 aa13.94□□□□□ -0.18
TIMP4-201ENST00000287814 LY6G6CO95867 125 aa13.94□□□□□ -0.18
TIMP4-201ENST00000287814 ZNF506Q5JVG8 444 aa13.94□□□□□ -0.18
TIMP4-201ENST00000287814 C9orf85Q96MD7 179 aa13.94□□□□□ -0.18
TIMP4-201ENST00000287814 B4DEV8 164 aa13.93□□□□□ -0.18
TIMP4-201ENST00000287814 M0R2P5 195 aa13.93□□□□□ -0.18
TIMP4-201ENST00000287814 IGHV3-53P01767 116 aa13.93□□□□□ -0.18
TIMP4-201ENST00000287814 OR5I1Q13606 314 aa13.93□□□□□ -0.18
TIMP4-201ENST00000287814 TOR2AQ5JU69 321 aa13.92□□□□□ -0.18
TIMP4-201ENST00000287814 POM121L12Q8N7R1 296 aa13.92□□□□□ -0.18
TIMP4-201ENST00000287814 GRIFINA4D1Z8 144 aa13.91□□□□□ -0.18
TIMP4-201ENST00000287814 PGPEP1LA6NFU8 196 aa13.91□□□□□ -0.18
TIMP4-201ENST00000287814 LINC01559Q495D7 138 aa13.91□□□□□ -0.18
TIMP4-201ENST00000287814 TMSB15BA0A087X1C1 80 aa13.91□□□□□ -0.18
TIMP4-201ENST00000287814 LGALS9CQ6DKI2 356 aa13.91□□□□□ -0.18
TIMP4-201ENST00000287814 PRR27Q6MZM9 219 aa13.91□□□□□ -0.18
TIMP4-201ENST00000287814 FAM210AQ96ND0 272 aa13.91□□□□□ -0.18
TIMP4-201ENST00000287814 MUC4Q99102 2169 aa13.9□□□□□ -0.18
TIMP4-201ENST00000287814 TRAV26-1A0A087WT03 109 aa13.9□□□□□ -0.18
TIMP4-201ENST00000287814 SFTA3P0C7M3 94 aa13.9□□□□□ -0.18
TIMP4-201ENST00000287814 GNG4P50150 75 aa13.9□□□□□ -0.18
TIMP4-201ENST00000287814 RPL19P84098 196 aaKnown RBP13.9□□□□□ -0.18
TIMP4-201ENST00000287814 ZNF479Q96JC4 524 aa13.9□□□□□ -0.18
TIMP4-201ENST00000287814 A0A0J9YY99 117 aa13.89□□□□□ -0.19
TIMP4-201ENST00000287814 C9JCJ5 164 aa13.89□□□□□ -0.19
TIMP4-201ENST00000287814 S100A4P26447 101 aaKnown RBP13.89□□□□□ -0.19
TIMP4-201ENST00000287814 ASIPP42127 132 aa13.89□□□□□ -0.19
TIMP4-201ENST00000287814 ZNF876PQ49A33 203 aa13.89□□□□□ -0.19
TIMP4-201ENST00000287814 EIF5A2Q9GZV4 153 aaKnown RBP13.89□□□□□ -0.19
TIMP4-201ENST00000287814 VPS13DQ5THJ4 4388 aa13.88□□□□□ -0.19
TIMP4-201ENST00000287814 FHL2Q14192 279 aa13.88□□□□□ -0.19
TIMP4-201ENST00000287814 DNLZQ5SXM8 178 aa13.88□□□□□ -0.19
TIMP4-201ENST00000287814 TMEM250H0YL14 139 aa13.88□□□□□ -0.19
TIMP4-201ENST00000287814 H3BVH4 76 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms