RNA–Protein interactions for RNA: ENST00000270142.10

SOD1-201, Transcript of superoxide dismutase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOD1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-201ENST00000270142 GOLT1AQ6ZVE7 132 aa10.3□□□□□ -0.76
SOD1-201ENST00000270142 OR4C5Q8NGB2 326 aa10.3□□□□□ -0.76
SOD1-201ENST00000270142 SCGB1C1Q8TD33 95 aa10.3□□□□□ -0.76
SOD1-201ENST00000270142 TVP23CQ96ET8 276 aa10.3□□□□□ -0.76
SOD1-201ENST00000270142 MBD2Q9UBB5 411 aa10.3□□□□□ -0.76
SOD1-201ENST00000270142 TRAV8-1A0A0A6YYK1 113 aa10.29□□□□□ -0.76
SOD1-201ENST00000270142 TRAV21A0A0B4J279 112 aa10.29□□□□□ -0.76
SOD1-201ENST00000270142 CRYGDP07320 174 aa10.29□□□□□ -0.76
SOD1-201ENST00000270142 RPL12P30050 165 aaKnown RBP10.29□□□□□ -0.76
SOD1-201ENST00000270142 Q5VSD8 79 aa10.29□□□□□ -0.76
SOD1-201ENST00000270142 WFDC1Q9HC57 220 aa10.29□□□□□ -0.76
SOD1-201ENST00000270142 PET100P0DJ07 73 aa10.28□□□□□ -0.76
SOD1-201ENST00000270142 INAFM2P0DMQ5 153 aa10.28□□□□□ -0.76
SOD1-201ENST00000270142 GATA1P15976 413 aaPredicted RBP10.28□□□□□ -0.76
SOD1-201ENST00000270142 GNG5P63218 68 aa10.28□□□□□ -0.76
SOD1-201ENST00000270142 FAM74A1Q5RGS3 127 aa10.28□□□□□ -0.76
SOD1-201ENST00000270142 C10orf126Q8N4M7 172 aa10.28□□□□□ -0.76
SOD1-201ENST00000270142 MARVELD1Q9BSK0 173 aa10.28□□□□□ -0.76
SOD1-201ENST00000270142 SSNA1O43805 119 aa10.27□□□□□ -0.77
SOD1-201ENST00000270142 RAB2AP61019 212 aa10.27□□□□□ -0.77
SOD1-201ENST00000270142 ACOT6Q3I5F7 207 aaPredicted RBP10.27□□□□□ -0.77
SOD1-201ENST00000270142 PQLC2Q6ZP29 291 aa10.27□□□□□ -0.77
SOD1-201ENST00000270142 NHLRC2Q8NBF2 726 aa10.27□□□□□ -0.77
SOD1-201ENST00000270142 SDF2L1Q9HCN8 221 aa10.27□□□□□ -0.77
SOD1-201ENST00000270142 TREM1Q9NP99 234 aa10.27□□□□□ -0.77
SOD1-201ENST00000270142 A0A1W2PPV4 95 aa10.26□□□□□ -0.77
SOD1-201ENST00000270142 HMGB3O15347 200 aaKnown RBP10.26□□□□□ -0.77
SOD1-201ENST00000270142 GCSHP23434 173 aa10.26□□□□□ -0.77
SOD1-201ENST00000270142 PPT1P50897 306 aa10.26□□□□□ -0.77
SOD1-201ENST00000270142 ARL6IP6Q8N6S5 226 aa10.26□□□□□ -0.77
SOD1-201ENST00000270142 FRZBQ92765 325 aa10.26□□□□□ -0.77
SOD1-201ENST00000270142 SGK494Q96LW2 274 aa10.26□□□□□ -0.77
SOD1-201ENST00000270142 IGHV3-38A0A0C4DH36 116 aa10.25□□□□□ -0.77
SOD1-201ENST00000270142 TIRAPP58753 221 aa10.25□□□□□ -0.77
SOD1-201ENST00000270142 SH2D6Q7Z4S9 175 aa10.25□□□□□ -0.77
SOD1-201ENST00000270142 ASB13Q8WXK3 278 aa10.25□□□□□ -0.77
SOD1-201ENST00000270142 KCNS1Q96KK3 526 aa10.25□□□□□ -0.77
SOD1-201ENST00000270142 MYCBP2O75592 4640 aa10.24□□□□□ -0.77
SOD1-201ENST00000270142 LRCOL1A6NCL2 159 aa10.24□□□□□ -0.77
SOD1-201ENST00000270142 FBLL1A6NHQ2 334 aaKnown RBP10.24□□□□□ -0.77
SOD1-201ENST00000270142 SMR3BP02814 79 aaPredicted RBP10.24□□□□□ -0.77
SOD1-201ENST00000270142 HAMPP81172 84 aa10.24□□□□□ -0.77
SOD1-201ENST00000270142 LINC01556Q5JQF7 62 aa10.24□□□□□ -0.77
SOD1-201ENST00000270142 DPPA3Q6W0C5 159 aa10.24□□□□□ -0.77
SOD1-201ENST00000270142 SLC25A29Q8N8R3 303 aa10.24□□□□□ -0.77
SOD1-201ENST00000270142 OR10G9Q8NGN4 311 aa10.24□□□□□ -0.77
SOD1-201ENST00000270142 OR10G7Q8NGN6 311 aa10.24□□□□□ -0.77
SOD1-201ENST00000270142 C11orf21Q9P2W6 132 aa10.24□□□□□ -0.77
SOD1-201ENST00000270142 IGLV5-52A0A0A0MRZ9 124 aa10.23□□□□□ -0.77
SOD1-201ENST00000270142 RS1O15537 224 aa10.23□□□□□ -0.77
SOD1-201ENST00000270142 PSCAO43653 123 aa10.23□□□□□ -0.77
SOD1-201ENST00000270142 ARL14EPLP0DKL9 152 aa10.23□□□□□ -0.77
SOD1-201ENST00000270142 ZNF80P51504 273 aaPredicted RBP10.23□□□□□ -0.77
SOD1-201ENST00000270142 IGHV3-73A0A0B4J1V6 119 aa10.22□□□□□ -0.77
SOD1-201ENST00000270142 IBA57-AS1B1ANH7 110 aa10.22□□□□□ -0.77
SOD1-201ENST00000270142 CDC34P49427 236 aaPredicted RBP10.22□□□□□ -0.77
SOD1-201ENST00000270142 ZNF876PQ49A33 203 aa10.22□□□□□ -0.77
SOD1-201ENST00000270142 CFAP126Q5VTH2 177 aa10.22□□□□□ -0.77
SOD1-201ENST00000270142 TMEM75Q8N9X5 138 aa10.22□□□□□ -0.77
SOD1-201ENST00000270142 NDFIP1Q9BT67 221 aa10.22□□□□□ -0.77
SOD1-201ENST00000270142 TRAV8-6A0A0B4J262 113 aa10.21□□□□□ -0.77
SOD1-201ENST00000270142 SERTM2A0A1B0GWG4 89 aa10.21□□□□□ -0.77
SOD1-201ENST00000270142 TCRAP04437 139 aa10.21□□□□□ -0.77
SOD1-201ENST00000270142 PFN1P07737 140 aaKnown RBP10.21□□□□□ -0.77
SOD1-201ENST00000270142 STAG3L2P0CL84 134 aa10.21□□□□□ -0.77
SOD1-201ENST00000270142 STAG3L3P0CL85 134 aa10.21□□□□□ -0.77
SOD1-201ENST00000270142 RHOHQ15669 191 aa10.21□□□□□ -0.77
SOD1-201ENST00000270142 OR10J3Q5JRS4 329 aa10.21□□□□□ -0.77
SOD1-201ENST00000270142 C9orf85Q96MD7 179 aa10.21□□□□□ -0.77
SOD1-201ENST00000270142 PRADC1Q9BSG0 188 aa10.21□□□□□ -0.77
SOD1-201ENST00000270142 Q9HAA7 133 aa10.21□□□□□ -0.77
SOD1-201ENST00000270142 TRBV6-4A0A1B0GX49 114 aa10.2□□□□□ -0.78
SOD1-201ENST00000270142 GCGP01275 180 aa10.2□□□□□ -0.78
SOD1-201ENST00000270142 IGHV3-30P01768 117 aa10.2□□□□□ -0.78
SOD1-201ENST00000270142 IGHV3-33P01772 117 aa10.2□□□□□ -0.78
SOD1-201ENST00000270142 IGHV3-30-3P0DP02 117 aa10.2□□□□□ -0.78
SOD1-201ENST00000270142 IGHV3-30-5P0DP03 117 aa10.2□□□□□ -0.78
SOD1-201ENST00000270142 Q8N814 137 aa10.2□□□□□ -0.78
SOD1-201ENST00000270142 C5orf17Q8NAS9 161 aa10.2□□□□□ -0.78
SOD1-201ENST00000270142 NTN5Q8WTR8 489 aaPredicted RBP10.2□□□□□ -0.78
SOD1-201ENST00000270142 PSG8Q9UQ74 426 aa10.2□□□□□ -0.78
SOD1-201ENST00000270142 PGPEP1LA6NFU8 196 aa10.19□□□□□ -0.78
SOD1-201ENST00000270142 TAAR5O14804 337 aa10.19□□□□□ -0.78
SOD1-201ENST00000270142 CIDEAO60543 219 aa10.19□□□□□ -0.78
SOD1-201ENST00000270142 IGLV2-11P01706 119 aa10.19□□□□□ -0.78
SOD1-201ENST00000270142 RNASE3P12724 160 aaKnown RBP10.19□□□□□ -0.78
SOD1-201ENST00000270142 DEFA1P59665 94 aa10.19□□□□□ -0.78
SOD1-201ENST00000270142 DEFA3P59666 94 aa10.19□□□□□ -0.78
SOD1-201ENST00000270142 ZNF506Q5JVG8 444 aa10.19□□□□□ -0.78
SOD1-201ENST00000270142 LELP1Q5T871 98 aa10.19□□□□□ -0.78
SOD1-201ENST00000270142 HSD17B11Q8NBQ5 300 aa10.19□□□□□ -0.78
SOD1-201ENST00000270142 OR2G3Q8NGZ4 309 aa10.19□□□□□ -0.78
SOD1-201ENST00000270142 SUN5Q8TC36 379 aa10.19□□□□□ -0.78
SOD1-201ENST00000270142 A6NHS1 94 aa10.18□□□□□ -0.78
SOD1-201ENST00000270142 GCHFRP30047 84 aa10.18□□□□□ -0.78
SOD1-201ENST00000270142 PRNTQ86SH4 94 aa10.18□□□□□ -0.78
SOD1-201ENST00000270142 RAB24Q969Q5 203 aa10.18□□□□□ -0.78
SOD1-201ENST00000270142 TMEM70Q9BUB7 260 aa10.18□□□□□ -0.78
SOD1-201ENST00000270142 GGTLC3B5MD39 225 aa10.17□□□□□ -0.78
SOD1-201ENST00000270142 K7EQM0 130 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms