RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 LY6DQ14210 128 aa12.86□□□□□ -0.35
SQLE-201ENST00000265896 OR1N2Q8NGR9 330 aa12.86□□□□□ -0.35
SQLE-201ENST00000265896 ACACBO00763 2458 aa12.85□□□□□ -0.35
SQLE-201ENST00000265896 M0R1W7 72 aa12.85□□□□□ -0.35
SQLE-201ENST00000265896 SMIM13P0DJ93 91 aa12.85□□□□□ -0.35
SQLE-201ENST00000265896 RPS20P60866 119 aaKnown RBP12.85□□□□□ -0.35
SQLE-201ENST00000265896 OR9G4Q8NGQ1 327 aa12.85□□□□□ -0.35
SQLE-201ENST00000265896 C2CD3Q4AC94 2353 aa12.85□□□□□ -0.35
SQLE-201ENST00000265896 PPBPP02775 128 aa12.84□□□□□ -0.35
SQLE-201ENST00000265896 FABP2P12104 132 aa12.84□□□□□ -0.35
SQLE-201ENST00000265896 IGHV7-4-1A0A0J9YVY3 117 aa12.84□□□□□ -0.35
SQLE-201ENST00000265896 S100A4P26447 101 aaKnown RBP12.84□□□□□ -0.35
SQLE-201ENST00000265896 GNRH2O43555 120 aa12.84□□□□□ -0.35
SQLE-201ENST00000265896 DPM2O94777 84 aa12.84□□□□□ -0.35
SQLE-201ENST00000265896 METTL26Q96S19 204 aa12.84□□□□□ -0.35
SQLE-201ENST00000265896 TEX48A0A1B0GUV7 120 aa12.83□□□□□ -0.36
SQLE-201ENST00000265896 OR4X2Q8NGF9 303 aa12.83□□□□□ -0.36
SQLE-201ENST00000265896 MYOZ3Q8TDC0 251 aa12.83□□□□□ -0.36
SQLE-201ENST00000265896 CSTL1Q9H114 145 aa12.83□□□□□ -0.36
SQLE-201ENST00000265896 IGKV3-20P01619 116 aa12.83□□□□□ -0.36
SQLE-201ENST00000265896 H3BMG7 143 aa12.82□□□□□ -0.36
SQLE-201ENST00000265896 LINC01559Q495D7 138 aa12.82□□□□□ -0.36
SQLE-201ENST00000265896 SH2D6Q7Z4S9 175 aa12.82□□□□□ -0.36
SQLE-201ENST00000265896 AJUBAQ96IF1 538 aa12.82□□□□□ -0.36
SQLE-201ENST00000265896 PSMG3-AS1Q96PY0 264 aa12.82□□□□□ -0.36
SQLE-201ENST00000265896 NXT2Q9NPJ8 142 aaKnown RBP12.82□□□□□ -0.36
SQLE-201ENST00000265896 RNASE4P34096 147 aaKnown RBP12.82□□□□□ -0.36
SQLE-201ENST00000265896 C11orf71Q6IPW1 123 aa12.82□□□□□ -0.36
SQLE-201ENST00000265896 SMIM15Q7Z3B0 74 aa12.82□□□□□ -0.36
SQLE-201ENST00000265896 NRACQ8N912 160 aa12.82□□□□□ -0.36
SQLE-201ENST00000265896 COL25A1Q9BXS0 654 aaPredicted RBP12.82□□□□□ -0.36
SQLE-201ENST00000265896 SIRPDQ9H106 197 aa12.82□□□□□ -0.36
SQLE-201ENST00000265896 JPT2Q9H910 190 aa12.82□□□□□ -0.36
SQLE-201ENST00000265896 CYSLTR1Q9Y271 337 aa12.82□□□□□ -0.36
SQLE-201ENST00000265896 PKD1L2Q7Z442 2459 aa12.82□□□□□ -0.36
SQLE-201ENST00000265896 WFDC2Q14508 124 aa12.81□□□□□ -0.36
SQLE-201ENST00000265896 LAGE3Q14657 143 aa12.81□□□□□ -0.36
SQLE-201ENST00000265896 Q6ZS46 218 aa12.81□□□□□ -0.36
SQLE-201ENST00000265896 HIST1H4GQ99525 98 aa12.81□□□□□ -0.36
SQLE-201ENST00000265896 ABCA12Q86UK0 2595 aa12.81□□□□□ -0.36
SQLE-201ENST00000265896 Q8N8P6 123 aa12.81□□□□□ -0.36
SQLE-201ENST00000265896 FAM110DQ8TAY7 271 aaPredicted RBP12.81□□□□□ -0.36
SQLE-201ENST00000265896 NPFFR1Q9GZQ6 430 aa12.81□□□□□ -0.36
SQLE-201ENST00000265896 MXRA5Q9NR99 2828 aa12.8□□□□□ -0.36
SQLE-201ENST00000265896 IGLV2-18A0A075B6J9 118 aa12.8□□□□□ -0.36
SQLE-201ENST00000265896 SCGB2A1O75556 95 aa12.8□□□□□ -0.36
SQLE-201ENST00000265896 ARL3P36405 182 aa12.8□□□□□ -0.36
SQLE-201ENST00000265896 FBN2P35556 2912 aa12.8□□□□□ -0.36
SQLE-201ENST00000265896 PTPN13Q12923 2485 aa12.8□□□□□ -0.36
SQLE-201ENST00000265896 TGFAP01135 160 aa12.8□□□□□ -0.36
SQLE-201ENST00000265896 NIPBLQ6KC79 2804 aaeCLIP12.79□□□□□ -0.36
SQLE-201ENST00000265896 KLHL30-AS1Q8NEE0 82 aa12.79□□□□□ -0.36
SQLE-201ENST00000265896 DPF1Q92782 380 aa12.79□□□□□ -0.36
SQLE-201ENST00000265896 ZNF48Q96MX3 618 aaPredicted RBP12.79□□□□□ -0.36
SQLE-201ENST00000265896 GTSF1LQ9H1H1 148 aa12.79□□□□□ -0.36
SQLE-201ENST00000265896 ATP5G2Q06055 141 aa12.78□□□□□ -0.36
SQLE-201ENST00000265896 EEF1AKMT3Q96AZ1 226 aa12.78□□□□□ -0.36
SQLE-201ENST00000265896 SONP18583 2426 aaKnown RBP12.78□□□□□ -0.36
SQLE-201ENST00000265896 WNK1Q9H4A3 2382 aa12.78□□□□□ -0.36
SQLE-201ENST00000265896 CENPVL3A0A0U1RRI6 287 aa12.78□□□□□ -0.36
SQLE-201ENST00000265896 SCGB3A1Q96QR1 104 aa12.78□□□□□ -0.36
SQLE-201ENST00000265896 ANXA2RQ3ZCQ2 193 aa12.78□□□□□ -0.36
SQLE-201ENST00000265896 LRRK2Q5S007 2527 aa12.77□□□□□ -0.36
SQLE-201ENST00000265896 A0A087WWL8 130 aa12.77□□□□□ -0.36
SQLE-201ENST00000265896 TMEM95Q3KNT9 176 aa12.77□□□□□ -0.36
SQLE-201ENST00000265896 ETDBQ3ZM63 59 aa12.77□□□□□ -0.36
SQLE-201ENST00000265896 CNFNQ9BYD5 112 aa12.77□□□□□ -0.36
SQLE-201ENST00000265896 PHLDA3Q9Y5J5 127 aa12.77□□□□□ -0.36
SQLE-201ENST00000265896 G3V4G9 280 aa12.77□□□□□ -0.37
SQLE-201ENST00000265896 BLCAPP62952 87 aa12.77□□□□□ -0.37
SQLE-201ENST00000265896 CEND1Q8N111 149 aa12.77□□□□□ -0.37
SQLE-201ENST00000265896 C19orf84I3L1E1 186 aa12.76□□□□□ -0.37
SQLE-201ENST00000265896 COX8CQ7Z4L0 72 aa12.76□□□□□ -0.37
SQLE-201ENST00000265896 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.76□□□□□ -0.37
SQLE-201ENST00000265896 NPFFO15130 113 aa12.76□□□□□ -0.37
SQLE-201ENST00000265896 INSL3P51460 131 aa12.76□□□□□ -0.37
SQLE-201ENST00000265896 CD300EQ496F6 205 aaPredicted RBP12.76□□□□□ -0.37
SQLE-201ENST00000265896 NACAE9PAV3 2078 aa12.76□□□□□ -0.37
SQLE-201ENST00000265896 PF4V1P10720 104 aa12.75□□□□□ -0.37
SQLE-201ENST00000265896 SCGB2A2Q13296 93 aa12.75□□□□□ -0.37
SQLE-201ENST00000265896 EBI3Q14213 229 aa12.75□□□□□ -0.37
SQLE-201ENST00000265896 MINOS1Q5TGZ0 78 aa12.75□□□□□ -0.37
SQLE-201ENST00000265896 SLC50A1Q9BRV3 221 aa12.75□□□□□ -0.37
SQLE-201ENST00000265896 ZMAT4Q9H898 229 aa12.75□□□□□ -0.37
SQLE-201ENST00000265896 MINOS1-NBL1R4GNA1 71 aa12.75□□□□□ -0.37
SQLE-201ENST00000265896 TRAV41A0A0B4J266 112 aa12.75□□□□□ -0.37
SQLE-201ENST00000265896 UBE2E1P51965 193 aa12.75□□□□□ -0.37
SQLE-201ENST00000265896 FAM74A4Q5TZK3 123 aa12.75□□□□□ -0.37
SQLE-201ENST00000265896 SPOCK3Q9BQ16 436 aa12.75□□□□□ -0.37
SQLE-201ENST00000265896 SRSF1Q07955 248 aaKnown RBP eCLIP12.75□□□□□ -0.37
SQLE-201ENST00000265896 RASL10AQ92737 203 aa12.75□□□□□ -0.37
SQLE-201ENST00000265896 ZNF479Q96JC4 524 aa12.75□□□□□ -0.37
SQLE-201ENST00000265896 MUC4Q99102 2169 aa12.75□□□□□ -0.37
SQLE-201ENST00000265896 NF1P21359 2839 aa12.74□□□□□ -0.37
SQLE-201ENST00000265896 SMAGPQ0VAQ4 97 aa12.74□□□□□ -0.37
SQLE-201ENST00000265896 GPHB5Q86YW7 130 aa12.74□□□□□ -0.37
SQLE-201ENST00000265896 C5orf56Q8N8D9 126 aa12.74□□□□□ -0.37
SQLE-201ENST00000265896 SIVA1O15304 175 aa12.74□□□□□ -0.37
SQLE-201ENST00000265896 A0A087WX48 190 aa12.73□□□□□ -0.37
SQLE-201ENST00000265896 F5H697 171 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms