RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 OR10J6PQ8NGY7 276 aa13.38□□□□□ -0.27
SDF4-201ENST00000263741 PGPA6NDG6 321 aa13.37□□□□□ -0.27
SDF4-201ENST00000263741 DUSP14O95147 198 aaKnown RBP13.37□□□□□ -0.27
SDF4-201ENST00000263741 Q6ZWC4 215 aa13.37□□□□□ -0.27
SDF4-201ENST00000263741 ZNF664Q8N3J9 261 aa13.37□□□□□ -0.27
SDF4-201ENST00000263741 MRPL53Q96EL3 112 aaKnown RBP13.37□□□□□ -0.27
SDF4-201ENST00000263741 NDUFAF3Q9BU61 184 aa13.37□□□□□ -0.27
SDF4-201ENST00000263741 U3KQK5 164 aa13.37□□□□□ -0.27
SDF4-201ENST00000263741 A8MTW9 85 aa13.36□□□□□ -0.27
SDF4-201ENST00000263741 GGTLC3B5MD39 225 aa13.36□□□□□ -0.27
SDF4-201ENST00000263741 K7EN84 100 aa13.36□□□□□ -0.27
SDF4-201ENST00000263741 CENPWQ5EE01 88 aa13.36□□□□□ -0.27
SDF4-201ENST00000263741 OTORQ9NRC9 128 aa13.36□□□□□ -0.27
SDF4-201ENST00000263741 SPRY2O43597 315 aa13.36□□□□□ -0.27
SDF4-201ENST00000263741 SCGB1D1O95968 90 aa13.36□□□□□ -0.27
SDF4-201ENST00000263741 MT-ND6P03923 174 aa13.36□□□□□ -0.27
SDF4-201ENST00000263741 SSTP61278 116 aa13.36□□□□□ -0.27
SDF4-201ENST00000263741 WDR73Q6P4I2 378 aa13.36□□□□□ -0.27
SDF4-201ENST00000263741 RNF183Q96D59 192 aa13.36□□□□□ -0.27
SDF4-201ENST00000263741 VGLL1Q99990 258 aa13.36□□□□□ -0.27
SDF4-201ENST00000263741 MRPL18Q9H0U6 180 aaKnown RBP13.36□□□□□ -0.27
SDF4-201ENST00000263741 TRAV12-2A0A075B6T6 113 aa13.35□□□□□ -0.27
SDF4-201ENST00000263741 J3KRW8 73 aa13.35□□□□□ -0.27
SDF4-201ENST00000263741 NUTF2P61970 127 aaKnown RBP13.35□□□□□ -0.27
SDF4-201ENST00000263741 KIR3DS1Q14943 382 aa13.35□□□□□ -0.27
SDF4-201ENST00000263741 LYPD1Q8N2G4 141 aa13.35□□□□□ -0.27
SDF4-201ENST00000263741 A0A1W2PRE2 83 aa13.35□□□□□ -0.27
SDF4-201ENST00000263741 NPIPB6E9PJ23 425 aa13.35□□□□□ -0.27
SDF4-201ENST00000263741 CRISP2P16562 243 aa13.35□□□□□ -0.27
SDF4-201ENST00000263741 CSNK1G2-AS1Q8NCQ2 148 aa13.35□□□□□ -0.27
SDF4-201ENST00000263741 Q8TAT8 98 aa13.35□□□□□ -0.27
SDF4-201ENST00000263741 CLUHP3Q96NS8 147 aa13.35□□□□□ -0.27
SDF4-201ENST00000263741 OSTCQ9NRP0 149 aa13.35□□□□□ -0.27
SDF4-201ENST00000263741 PPP1R14DQ9NXH3 145 aa13.35□□□□□ -0.27
SDF4-201ENST00000263741 NAGKQ9UJ70 344 aa13.35□□□□□ -0.27
SDF4-201ENST00000263741 SLC25A5P05141 298 aaKnown RBP13.34□□□□□ -0.27
SDF4-201ENST00000263741 CT45A10P0DMU9 189 aa13.34□□□□□ -0.27
SDF4-201ENST00000263741 C2orf88Q9BSF0 95 aa13.34□□□□□ -0.27
SDF4-201ENST00000263741 CSN1S1P47710 185 aa13.33□□□□□ -0.27
SDF4-201ENST00000263741 GNB1LQ9BYB4 327 aa13.33□□□□□ -0.27
SDF4-201ENST00000263741 AGPAT4-IT1Q9H0P7 198 aa13.33□□□□□ -0.27
SDF4-201ENST00000263741 V9GYV3 84 aa13.33□□□□□ -0.27
SDF4-201ENST00000263741 IGHV3OR16-12A0A075B7B8 117 aa13.33□□□□□ -0.28
SDF4-201ENST00000263741 DIRC3C9JPN6 131 aa13.33□□□□□ -0.28
SDF4-201ENST00000263741 RAB4BP61018 213 aa13.33□□□□□ -0.28
SDF4-201ENST00000263741 SUMO1P63165 101 aaKnown RBP13.33□□□□□ -0.28
SDF4-201ENST00000263741 GOLT1AQ6ZVE7 132 aa13.33□□□□□ -0.28
SDF4-201ENST00000263741 TMEM256Q8N2U0 113 aa13.33□□□□□ -0.28
SDF4-201ENST00000263741 SNURFLB1AK76 121 aa13.32□□□□□ -0.28
SDF4-201ENST00000263741 CRXO43186 299 aaPredicted RBP13.32□□□□□ -0.28
SDF4-201ENST00000263741 ESDP10768 282 aa13.32□□□□□ -0.28
SDF4-201ENST00000263741 OR11H2Q8NH07 326 aa13.32□□□□□ -0.28
SDF4-201ENST00000263741 TRAV8-1A0A0A6YYK1 113 aa13.32□□□□□ -0.28
SDF4-201ENST00000263741 RBMY1A1P0DJD3 496 aaKnown RBP13.32□□□□□ -0.28
SDF4-201ENST00000263741 RBMY1CP0DJD4 496 aa13.32□□□□□ -0.28
SDF4-201ENST00000263741 TAS2R60P59551 318 aa13.32□□□□□ -0.28
SDF4-201ENST00000263741 RBMY1FQ15415 496 aaKnown RBP13.32□□□□□ -0.28
SDF4-201ENST00000263741 BAGE3Q86Y29 109 aa13.32□□□□□ -0.28
SDF4-201ENST00000263741 BAGE2Q86Y30 109 aa13.32□□□□□ -0.28
SDF4-201ENST00000263741 SGK494Q96LW2 274 aa13.32□□□□□ -0.28
SDF4-201ENST00000263741 C1QTNF4Q9BXJ3 329 aa13.32□□□□□ -0.28
SDF4-201ENST00000263741 TP53TG1Q9Y2A0 90 aa13.32□□□□□ -0.28
SDF4-201ENST00000263741 GRIFINA4D1Z8 144 aa13.3□□□□□ -0.28
SDF4-201ENST00000263741 DEFB4AO15263 64 aa13.3□□□□□ -0.28
SDF4-201ENST00000263741 Q0VG73 95 aa13.3□□□□□ -0.28
SDF4-201ENST00000263741 C9orf47Q6ZRZ4 202 aa13.3□□□□□ -0.28
SDF4-201ENST00000263741 C5orf17Q8NAS9 161 aa13.3□□□□□ -0.28
SDF4-201ENST00000263741 OR5I1Q13606 314 aa13.3□□□□□ -0.28
SDF4-201ENST00000263741 TMEM78Q5T7P6 136 aa13.3□□□□□ -0.28
SDF4-201ENST00000263741 C1orf158Q8N1D5 194 aa13.3□□□□□ -0.28
SDF4-201ENST00000263741 SAMD10Q9BYL1 202 aa13.3□□□□□ -0.28
SDF4-201ENST00000263741 A0A1B0GV90 55 aa13.29□□□□□ -0.28
SDF4-201ENST00000263741 CDKN1BP46527 198 aa13.29□□□□□ -0.28
SDF4-201ENST00000263741 IGF2BP2-AS1Q96M15 143 aa13.29□□□□□ -0.28
SDF4-201ENST00000263741 X6R8D5 127 aa13.29□□□□□ -0.28
SDF4-201ENST00000263741 SERF1AO75920 110 aa13.28□□□□□ -0.28
SDF4-201ENST00000263741 INSP01308 110 aa13.28□□□□□ -0.28
SDF4-201ENST00000263741 TCRAP04437 139 aa13.28□□□□□ -0.28
SDF4-201ENST00000263741 PRM2P04554 102 aa13.28□□□□□ -0.28
SDF4-201ENST00000263741 MGST1P10620 155 aaKnown RBP13.28□□□□□ -0.28
SDF4-201ENST00000263741 IBA57Q5T440 356 aaKnown RBP13.28□□□□□ -0.28
SDF4-201ENST00000263741 NAT8BQ9UHF3 227 aa13.28□□□□□ -0.28
SDF4-201ENST00000263741 HLA-DQA1P01909 254 aa13.28□□□□□ -0.28
SDF4-201ENST00000263741 PRR9Q5T870 116 aa13.28□□□□□ -0.28
SDF4-201ENST00000263741 A0A0J9YWU9 116 aa13.27□□□□□ -0.28
SDF4-201ENST00000263741 ZNF138P52744 262 aa13.27□□□□□ -0.28
SDF4-201ENST00000263741 LINC00477Q96M19 166 aa13.27□□□□□ -0.28
SDF4-201ENST00000263741 ZNF492Q9P255 531 aa13.27□□□□□ -0.28
SDF4-201ENST00000263741 EPDR1Q9UM22 224 aa13.27□□□□□ -0.28
SDF4-201ENST00000263741 RBAKDNA6NC62 111 aa13.27□□□□□ -0.29
SDF4-201ENST00000263741 OR10J3Q5JRS4 329 aa13.27□□□□□ -0.29
SDF4-201ENST00000263741 ZNF705AQ6ZN79 300 aaPredicted RBP13.27□□□□□ -0.29
SDF4-201ENST00000263741 FAM19A4Q96LR4 140 aa13.27□□□□□ -0.29
SDF4-201ENST00000263741 LINC00479Q96M42 142 aa13.27□□□□□ -0.29
SDF4-201ENST00000263741 TMEM208Q9BTX3 173 aa13.27□□□□□ -0.29
SDF4-201ENST00000263741 RNASE7Q9H1E1 156 aaKnown RBP13.27□□□□□ -0.29
SDF4-201ENST00000263741 NUPR1O60356 82 aa13.26□□□□□ -0.29
SDF4-201ENST00000263741 LEPP41159 167 aa13.26□□□□□ -0.29
SDF4-201ENST00000263741 TMEM183BQ1AE95 376 aa13.26□□□□□ -0.29
SDF4-201ENST00000263741 Q6ZQT7 251 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms