RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 MED14OSP0DP75 135 aa9.82□□□□□ -0.84
SGCA-201ENST00000262018 PRB4P10163 310 aaPredicted RBP9.82□□□□□ -0.84
SGCA-201ENST00000262018 SAPCD1Q5SSQ6 148 aa9.82□□□□□ -0.84
SGCA-201ENST00000262018 SAMD13Q5VXD3 122 aa9.82□□□□□ -0.84
SGCA-201ENST00000262018 DMRTA1Q5VZB9 504 aa9.82□□□□□ -0.84
SGCA-201ENST00000262018 Q6AWC8 147 aa9.82□□□□□ -0.84
SGCA-201ENST00000262018 HIST3H2BBQ8N257 126 aa9.82□□□□□ -0.84
SGCA-201ENST00000262018 GBGT1Q8N5D6 347 aa9.82□□□□□ -0.84
SGCA-201ENST00000262018 TSKUQ8WUA8 353 aa9.82□□□□□ -0.84
SGCA-201ENST00000262018 DAZAP1Q96EP5 407 aaKnown RBP9.82□□□□□ -0.84
SGCA-201ENST00000262018 ZC2HC1AQ96GY0 325 aa9.82□□□□□ -0.84
SGCA-201ENST00000262018 C20orf173Q96LM9 149 aa9.82□□□□□ -0.84
SGCA-201ENST00000262018 NPIPB6E9PJ23 425 aa9.82□□□□□ -0.84
SGCA-201ENST00000262018 CBLN1P23435 193 aa9.82□□□□□ -0.84
SGCA-201ENST00000262018 RPL11P62913 178 aaKnown RBP9.82□□□□□ -0.84
SGCA-201ENST00000262018 CEMP1Q6PRD7 247 aaPredicted RBP9.82□□□□□ -0.84
SGCA-201ENST00000262018 C9orf47Q6ZRZ4 202 aa9.82□□□□□ -0.84
SGCA-201ENST00000262018 TMEM18Q96B42 140 aa9.82□□□□□ -0.84
SGCA-201ENST00000262018 KRTAP4-5Q9BYR2 181 aa9.82□□□□□ -0.84
SGCA-201ENST00000262018 RPP21Q9H633 154 aaKnown RBP9.82□□□□□ -0.84
SGCA-201ENST00000262018 PPP1R14DQ9NXH3 145 aa9.82□□□□□ -0.84
SGCA-201ENST00000262018 A0A1B0GW15 77 aa9.81□□□□□ -0.84
SGCA-201ENST00000262018 XKRY2A2RUG3 117 aa9.81□□□□□ -0.84
SGCA-201ENST00000262018 P01737 135 aa9.81□□□□□ -0.84
SGCA-201ENST00000262018 ERCC8Q13216 396 aa9.81□□□□□ -0.84
SGCA-201ENST00000262018 C8orf49Q96NF6 230 aa9.81□□□□□ -0.84
SGCA-201ENST00000262018 ID1P41134 155 aa9.8□□□□□ -0.84
SGCA-201ENST00000262018 CRIP1P50238 77 aa9.8□□□□□ -0.84
SGCA-201ENST00000262018 OR10J3Q5JRS4 329 aa9.8□□□□□ -0.84
SGCA-201ENST00000262018 FAM162BQ5T6X4 162 aa9.8□□□□□ -0.84
SGCA-201ENST00000262018 ZNF738Q8NE65 137 aa9.8□□□□□ -0.84
SGCA-201ENST00000262018 DYNLRB2Q8TF09 96 aa9.8□□□□□ -0.84
SGCA-201ENST00000262018 DCANP1Q8TF63 244 aa9.8□□□□□ -0.84
SGCA-201ENST00000262018 AGPAT4-IT1Q9H0P7 198 aa9.8□□□□□ -0.84
SGCA-201ENST00000262018 KLK5Q9Y337 293 aaPredicted RBP9.8□□□□□ -0.84
SGCA-201ENST00000262018 CA1P00915 261 aaPredicted RBP9.79□□□□□ -0.84
SGCA-201ENST00000262018 CT45A10P0DMU9 189 aa9.79□□□□□ -0.84
SGCA-201ENST00000262018 ESDP10768 282 aa9.79□□□□□ -0.84
SGCA-201ENST00000262018 PAFAH1B2P68402 229 aa9.79□□□□□ -0.84
SGCA-201ENST00000262018 Q0VG73 95 aa9.79□□□□□ -0.84
SGCA-201ENST00000262018 LGALS9CQ6DKI2 356 aa9.79□□□□□ -0.84
SGCA-201ENST00000262018 Q8TAT8 98 aa9.79□□□□□ -0.84
SGCA-201ENST00000262018 NDFIP1Q9BT67 221 aa9.79□□□□□ -0.84
SGCA-201ENST00000262018 IGKV3-7A0A075B6H7 116 aa9.78□□□□□ -0.84
SGCA-201ENST00000262018 ZNF138P52744 262 aa9.78□□□□□ -0.84
SGCA-201ENST00000262018 TMEM78Q5T7P6 136 aa9.78□□□□□ -0.84
SGCA-201ENST00000262018 OR2K2Q8NGT1 345 aa9.78□□□□□ -0.84
SGCA-201ENST00000262018 MRPL18Q9H0U6 180 aaKnown RBP9.78□□□□□ -0.84
SGCA-201ENST00000262018 MS4A6AQ9H2W1 248 aa9.78□□□□□ -0.84
SGCA-201ENST00000262018 LENEPQ9Y5L5 61 aa9.78□□□□□ -0.84
SGCA-201ENST00000262018 SNURFLB1AK76 121 aa9.77□□□□□ -0.85
SGCA-201ENST00000262018 K7EQG2 157 aa9.77□□□□□ -0.85
SGCA-201ENST00000262018 FOXA3P55318 350 aaPredicted RBP9.77□□□□□ -0.85
SGCA-201ENST00000262018 TCL1AP56279 114 aa9.77□□□□□ -0.85
SGCA-201ENST00000262018 DEFB114Q30KQ6 69 aa9.77□□□□□ -0.85
SGCA-201ENST00000262018 LINC00477Q96M19 166 aa9.77□□□□□ -0.85
SGCA-201ENST00000262018 NEU1Q99519 415 aa9.77□□□□□ -0.85
SGCA-201ENST00000262018 SELENOKQ9Y6D0 94 aa9.77□□□□□ -0.85
SGCA-201ENST00000262018 SH2D1AO60880 128 aa9.76□□□□□ -0.85
SGCA-201ENST00000262018 CRISP2P16562 243 aa9.76□□□□□ -0.85
SGCA-201ENST00000262018 DEFB125Q8N687 156 aa9.76□□□□□ -0.85
SGCA-201ENST00000262018 NUP35Q8NFH5 326 aa9.76□□□□□ -0.85
SGCA-201ENST00000262018 OR8A1Q8NGG7 326 aa9.76□□□□□ -0.85
SGCA-201ENST00000262018 OR2D3Q8NGH3 330 aa9.76□□□□□ -0.85
SGCA-201ENST00000262018 OR10J6PQ8NGY7 276 aa9.76□□□□□ -0.85
SGCA-201ENST00000262018 TRAV2A0A0B4J234 112 aa9.75□□□□□ -0.85
SGCA-201ENST00000262018 ZNF80P51504 273 aaPredicted RBP9.75□□□□□ -0.85
SGCA-201ENST00000262018 RPS20P60866 119 aaKnown RBP9.75□□□□□ -0.85
SGCA-201ENST00000262018 CD300EQ496F6 205 aaPredicted RBP9.75□□□□□ -0.85
SGCA-201ENST00000262018 RBPMS2Q6ZRY4 209 aaKnown RBP9.75□□□□□ -0.85
SGCA-201ENST00000262018 WFDC3Q8IUB2 231 aa9.75□□□□□ -0.85
SGCA-201ENST00000262018 HIST1H2BLQ99880 126 aa9.75□□□□□ -0.85
SGCA-201ENST00000262018 TRAV25A0A0B4J276 109 aa9.74□□□□□ -0.85
SGCA-201ENST00000262018 TRBV7-9A0A0J9YWB2 115 aa9.74□□□□□ -0.85
SGCA-201ENST00000262018 A0A0J9YWU9 116 aa9.74□□□□□ -0.85
SGCA-201ENST00000262018 FABP5P3A8MUU1 101 aa9.74□□□□□ -0.85
SGCA-201ENST00000262018 HIGD1CA8MV81 97 aa9.74□□□□□ -0.85
SGCA-201ENST00000262018 HBBP68871 147 aa9.74□□□□□ -0.85
SGCA-201ENST00000262018 TMEM136Q6ZRR5 245 aa9.74□□□□□ -0.85
SGCA-201ENST00000262018 GTSF1Q8WW33 167 aa9.74□□□□□ -0.85
SGCA-201ENST00000262018 TMEM189A5PLL7 270 aa9.73□□□□□ -0.85
SGCA-201ENST00000262018 ZNF705DP0CH99 300 aaPredicted RBP9.73□□□□□ -0.85
SGCA-201ENST00000262018 ZNF705BP0CI00 300 aaPredicted RBP9.73□□□□□ -0.85
SGCA-201ENST00000262018 FABP4P15090 132 aa9.73□□□□□ -0.85
SGCA-201ENST00000262018 SNRPD3P62318 126 aaKnown RBP9.73□□□□□ -0.85
SGCA-201ENST00000262018 HIST1H1AQ02539 215 aaPredicted RBP9.73□□□□□ -0.85
SGCA-201ENST00000262018 TMEM61Q8N0U2 210 aa9.73□□□□□ -0.85
SGCA-201ENST00000262018 OR10D4PQ8NGN7 298 aa9.73□□□□□ -0.85
SGCA-201ENST00000262018 BORCS7Q96B45 105 aa9.73□□□□□ -0.85
SGCA-201ENST00000262018 FAM19A4Q96LR4 140 aa9.73□□□□□ -0.85
SGCA-201ENST00000262018 OVOL2Q9BRP0 275 aa9.73□□□□□ -0.85
SGCA-201ENST00000262018 WFDC10AQ9H1F0 79 aa9.73□□□□□ -0.85
SGCA-201ENST00000262018 VPS13DQ5THJ4 4388 aa9.73□□□□□ -0.85
SGCA-201ENST00000262018 IFITM10A6NMD0 228 aa9.73□□□□□ -0.85
SGCA-201ENST00000262018 SPINK4O60575 86 aa9.73□□□□□ -0.85
SGCA-201ENST00000262018 APCSP02743 223 aa9.73□□□□□ -0.85
SGCA-201ENST00000262018 RAB4AP20338 218 aa9.73□□□□□ -0.85
SGCA-201ENST00000262018 TFPI2P48307 235 aa9.73□□□□□ -0.85
SGCA-201ENST00000262018 DEFB1P60022 68 aa9.73□□□□□ -0.85
SGCA-201ENST00000262018 JOSD1Q15040 202 aaPredicted RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms