RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 TEX15Q9BXT5 2789 aa11.15□□□□□ -0.62
SFSWAP-201ENST00000261674 ODF3BA8MYP8 253 aa11.15□□□□□ -0.62
SFSWAP-201ENST00000261674 OR9G4Q8NGQ1 327 aa11.15□□□□□ -0.62
SFSWAP-201ENST00000261674 IGKV3D-20A0A0C4DH25 116 aa11.15□□□□□ -0.62
SFSWAP-201ENST00000261674 H3BRM9 83 aa11.15□□□□□ -0.62
SFSWAP-201ENST00000261674 BUB3O43684 328 aa11.15□□□□□ -0.62
SFSWAP-201ENST00000261674 NHP2Q9NX24 153 aaKnown RBP11.15□□□□□ -0.62
SFSWAP-201ENST00000261674 UNC79Q9P2D8 2635 aa11.15□□□□□ -0.62
SFSWAP-201ENST00000261674 SMIM17P0DL12 118 aa11.14□□□□□ -0.63
SFSWAP-201ENST00000261674 EFNA4P52798 201 aa11.14□□□□□ -0.63
SFSWAP-201ENST00000261674 FXYD2P54710 66 aa11.14□□□□□ -0.63
SFSWAP-201ENST00000261674 H3BVH4 76 aa11.14□□□□□ -0.63
SFSWAP-201ENST00000261674 M0R381 172 aa11.14□□□□□ -0.63
SFSWAP-201ENST00000261674 OR4X2Q8NGF9 303 aa11.14□□□□□ -0.63
SFSWAP-201ENST00000261674 IGKCP01834 107 aa11.14□□□□□ -0.63
SFSWAP-201ENST00000261674 C16orf92Q96LL3 132 aa11.14□□□□□ -0.63
SFSWAP-201ENST00000261674 NXT2Q9NPJ8 142 aaKnown RBP11.14□□□□□ -0.63
SFSWAP-201ENST00000261674 IGHV4-39P01824 125 aa11.13□□□□□ -0.63
SFSWAP-201ENST00000261674 SAA4P35542 130 aa11.13□□□□□ -0.63
SFSWAP-201ENST00000261674 ODF1Q14990 250 aa11.13□□□□□ -0.63
SFSWAP-201ENST00000261674 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.13□□□□□ -0.63
SFSWAP-201ENST00000261674 ADAMTSL5Q6ZMM2 481 aa11.13□□□□□ -0.63
SFSWAP-201ENST00000261674 ZNF575Q86XF7 245 aa11.13□□□□□ -0.63
SFSWAP-201ENST00000261674 MYOZ3Q8TDC0 251 aa11.13□□□□□ -0.63
SFSWAP-201ENST00000261674 ITPR3Q14573 2671 aa11.13□□□□□ -0.63
SFSWAP-201ENST00000261674 PPBPP02775 128 aa11.13□□□□□ -0.63
SFSWAP-201ENST00000261674 IGF1P05019 195 aa11.13□□□□□ -0.63
SFSWAP-201ENST00000261674 SMIM13P0DJ93 91 aa11.13□□□□□ -0.63
SFSWAP-201ENST00000261674 PLA2G2AP14555 144 aa11.13□□□□□ -0.63
SFSWAP-201ENST00000261674 GLMPQ8WWB7 406 aa11.13□□□□□ -0.63
SFSWAP-201ENST00000261674 MRPL35Q9NZE8 188 aaKnown RBP11.13□□□□□ -0.63
SFSWAP-201ENST00000261674 MYO9AB2RTY4 2548 aa11.13□□□□□ -0.63
SFSWAP-201ENST00000261674 J3QKU1 62 aa11.13□□□□□ -0.63
SFSWAP-201ENST00000261674 FABP2P12104 132 aa11.13□□□□□ -0.63
SFSWAP-201ENST00000261674 S100A4P26447 101 aaKnown RBP11.13□□□□□ -0.63
SFSWAP-201ENST00000261674 C11orf71Q6IPW1 123 aa11.13□□□□□ -0.63
SFSWAP-201ENST00000261674 METTL26Q96S19 204 aa11.13□□□□□ -0.63
SFSWAP-201ENST00000261674 SAMD5Q5TGI4 173 aa11.12□□□□□ -0.63
SFSWAP-201ENST00000261674 ZNF502Q8TBZ5 544 aa11.12□□□□□ -0.63
SFSWAP-201ENST00000261674 ABCA2Q9BZC7 2435 aa11.12□□□□□ -0.63
SFSWAP-201ENST00000261674 PAX8Q06710 450 aa11.11□□□□□ -0.63
SFSWAP-201ENST00000261674 CHAC1Q9BUX1 264 aa11.11□□□□□ -0.63
SFSWAP-201ENST00000261674 DPM2O94777 84 aa11.11□□□□□ -0.63
SFSWAP-201ENST00000261674 C8orf86Q6ZUL3 223 aa11.11□□□□□ -0.63
SFSWAP-201ENST00000261674 CUBNO60494 3623 aa11.11□□□□□ -0.63
SFSWAP-201ENST00000261674 FLNAP21333 2647 aaKnown RBP11.11□□□□□ -0.63
SFSWAP-201ENST00000261674 LCNL1Q6ZST4 164 aa11.11□□□□□ -0.63
SFSWAP-201ENST00000261674 MTURNQ8N3F0 131 aa11.11□□□□□ -0.63
SFSWAP-201ENST00000261674 TRBV25-1A0A075B6N4 114 aa11.1□□□□□ -0.63
SFSWAP-201ENST00000261674 A0A1W2PPM0 123 aa11.1□□□□□ -0.63
SFSWAP-201ENST00000261674 K7EP34 96 aa11.1□□□□□ -0.63
SFSWAP-201ENST00000261674 WFDC12Q8WWY7 111 aa11.1□□□□□ -0.63
SFSWAP-201ENST00000261674 DPF1Q92782 380 aa11.1□□□□□ -0.63
SFSWAP-201ENST00000261674 CCDC140Q96MF4 163 aa11.1□□□□□ -0.63
SFSWAP-201ENST00000261674 ZNF48Q96MX3 618 aaPredicted RBP11.1□□□□□ -0.63
SFSWAP-201ENST00000261674 HHLA3Q9XRX5 114 aa11.1□□□□□ -0.63
SFSWAP-201ENST00000261674 IGHV3-11P01762 117 aa11.1□□□□□ -0.63
SFSWAP-201ENST00000261674 ZFAND3Q9H8U3 227 aa11.1□□□□□ -0.63
SFSWAP-201ENST00000261674 MGPP08493 103 aa11.09□□□□□ -0.63
SFSWAP-201ENST00000261674 Q8N6K4 173 aa11.09□□□□□ -0.63
SFSWAP-201ENST00000261674 FAM110DQ8TAY7 271 aaPredicted RBP11.09□□□□□ -0.63
SFSWAP-201ENST00000261674 SRD5A1P18405 259 aa11.09□□□□□ -0.63
SFSWAP-201ENST00000261674 LINC01559Q495D7 138 aa11.09□□□□□ -0.63
SFSWAP-201ENST00000261674 MINOS1Q5TGZ0 78 aa11.09□□□□□ -0.63
SFSWAP-201ENST00000261674 BRD3OSQ6XYD6 125 aa11.09□□□□□ -0.63
SFSWAP-201ENST00000261674 MINOS1-NBL1R4GNA1 71 aa11.09□□□□□ -0.63
SFSWAP-201ENST00000261674 IGHV4-30-2A0A087WSY4 118 aa11.08□□□□□ -0.64
SFSWAP-201ENST00000261674 LAGE3Q14657 143 aa11.08□□□□□ -0.64
SFSWAP-201ENST00000261674 LY6EQ16553 131 aa11.08□□□□□ -0.64
SFSWAP-201ENST00000261674 EEF1AKMT3Q96AZ1 226 aa11.08□□□□□ -0.64
SFSWAP-201ENST00000261674 SLC50A1Q9BRV3 221 aa11.08□□□□□ -0.64
SFSWAP-201ENST00000261674 CLPSL1A2RUU4 121 aa11.08□□□□□ -0.64
SFSWAP-201ENST00000261674 C14orf178Q8N769 122 aaPredicted RBP11.08□□□□□ -0.64
SFSWAP-201ENST00000261674 MAPKAPK5-AS1Q8N8E1 139 aa11.08□□□□□ -0.64
SFSWAP-201ENST00000261674 Q8N8P6 123 aa11.08□□□□□ -0.64
SFSWAP-201ENST00000261674 ATP5G2Q06055 141 aa11.07□□□□□ -0.64
SFSWAP-201ENST00000261674 SCGB2A2Q13296 93 aa11.07□□□□□ -0.64
SFSWAP-201ENST00000261674 UFSP1Q6NVU6 142 aa11.07□□□□□ -0.64
SFSWAP-201ENST00000261674 SFTA2Q6UW10 78 aa11.07□□□□□ -0.64
SFSWAP-201ENST00000261674 HIST1H4GQ99525 98 aa11.07□□□□□ -0.64
SFSWAP-201ENST00000261674 F6UB75 175 aa11.07□□□□□ -0.64
SFSWAP-201ENST00000261674 TRAV8-2A0A0B4J237 113 aa11.07□□□□□ -0.64
SFSWAP-201ENST00000261674 IGHV4-61A0A0C4DH41 118 aa11.07□□□□□ -0.64
SFSWAP-201ENST00000261674 SIVA1O15304 175 aa11.07□□□□□ -0.64
SFSWAP-201ENST00000261674 ATP5LO75964 103 aa11.06□□□□□ -0.64
SFSWAP-201ENST00000261674 RAB9AP51151 201 aa11.06□□□□□ -0.64
SFSWAP-201ENST00000261674 PRR9Q5T870 116 aa11.06□□□□□ -0.64
SFSWAP-201ENST00000261674 AMTNQ6UX39 209 aa11.06□□□□□ -0.64
SFSWAP-201ENST00000261674 NEGR1Q7Z3B1 354 aa11.06□□□□□ -0.64
SFSWAP-201ENST00000261674 COX8CQ7Z4L0 72 aa11.06□□□□□ -0.64
SFSWAP-201ENST00000261674 TMEM190Q8WZ59 177 aa11.06□□□□□ -0.64
SFSWAP-201ENST00000261674 SIRPDQ9H106 197 aa11.06□□□□□ -0.64
SFSWAP-201ENST00000261674 SETXQ7Z333 2677 aaKnown RBP11.06□□□□□ -0.64
SFSWAP-201ENST00000261674 TRBV12-3P01733 135 aa11.05□□□□□ -0.64
SFSWAP-201ENST00000261674 CSTL1Q9H114 145 aa11.05□□□□□ -0.64
SFSWAP-201ENST00000261674 OOSP1A8MZH6 123 aa11.05□□□□□ -0.64
SFSWAP-201ENST00000261674 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.05□□□□□ -0.64
SFSWAP-201ENST00000261674 EBI3Q14213 229 aa11.05□□□□□ -0.64
SFSWAP-201ENST00000261674 RPL39LQ96EH5 51 aaKnown RBP11.05□□□□□ -0.64
SFSWAP-201ENST00000261674 SCGB3A1Q96QR1 104 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms