RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 PCNPQ8WW12 178 aaKnown RBP12.94□□□□□ -0.34
TM6SF1-201ENST00000258909 LOC100131303A0A0U1RQF7 123 aa12.93□□□□□ -0.34
TM6SF1-201ENST00000258909 CDC34P49427 236 aaPredicted RBP12.93□□□□□ -0.34
TM6SF1-201ENST00000258909 TRAV4A0A0B4J268 109 aa12.92□□□□□ -0.34
TM6SF1-201ENST00000258909 M0R2P5 195 aa12.92□□□□□ -0.34
TM6SF1-201ENST00000258909 LY96Q9Y6Y9 160 aa12.92□□□□□ -0.34
TM6SF1-201ENST00000258909 ARL6IP6Q8N6S5 226 aa12.91□□□□□ -0.34
TM6SF1-201ENST00000258909 SDF2L1Q9HCN8 221 aa12.91□□□□□ -0.34
TM6SF1-201ENST00000258909 SCRT2Q9NQ03 307 aa12.91□□□□□ -0.34
TM6SF1-201ENST00000258909 ORM1P02763 201 aa12.91□□□□□ -0.34
TM6SF1-201ENST00000258909 STAG3L2P0CL84 134 aa12.91□□□□□ -0.34
TM6SF1-201ENST00000258909 STAG3L3P0CL85 134 aa12.91□□□□□ -0.34
TM6SF1-201ENST00000258909 ATP6V0CP27449 155 aa12.91□□□□□ -0.34
TM6SF1-201ENST00000258909 ZNF80P51504 273 aaPredicted RBP12.91□□□□□ -0.34
TM6SF1-201ENST00000258909 Q8N1X5 172 aa12.91□□□□□ -0.34
TM6SF1-201ENST00000258909 ASB13Q8WXK3 278 aa12.91□□□□□ -0.34
TM6SF1-201ENST00000258909 RAB24Q969Q5 203 aa12.91□□□□□ -0.34
TM6SF1-201ENST00000258909 C9JCJ5 164 aa12.9□□□□□ -0.34
TM6SF1-201ENST00000258909 DNAH10OSP0CZ25 163 aa12.9□□□□□ -0.34
TM6SF1-201ENST00000258909 GCHFRP30047 84 aa12.9□□□□□ -0.34
TM6SF1-201ENST00000258909 Q5BKY6 102 aa12.9□□□□□ -0.34
TM6SF1-201ENST00000258909 OR2G3Q8NGZ4 309 aa12.9□□□□□ -0.34
TM6SF1-201ENST00000258909 SH3BGRL3Q9H299 93 aa12.9□□□□□ -0.34
TM6SF1-201ENST00000258909 C11orf21Q9P2W6 132 aa12.9□□□□□ -0.34
TM6SF1-201ENST00000258909 TRAV9-2A0A087WT02 112 aa12.89□□□□□ -0.35
TM6SF1-201ENST00000258909 TCRAP04437 139 aa12.89□□□□□ -0.35
TM6SF1-201ENST00000258909 ERVFC1-1P60608 527 aa12.89□□□□□ -0.35
TM6SF1-201ENST00000258909 KCNS1Q96KK3 526 aa12.89□□□□□ -0.35
TM6SF1-201ENST00000258909 AQP10Q96PS8 301 aa12.89□□□□□ -0.35
TM6SF1-201ENST00000258909 TXNDC17Q9BRA2 123 aa12.89□□□□□ -0.35
TM6SF1-201ENST00000258909 NDFIP1Q9BT67 221 aa12.89□□□□□ -0.35
TM6SF1-201ENST00000258909 MED28Q9H204 178 aa12.89□□□□□ -0.35
TM6SF1-201ENST00000258909 NFE4Q86UQ8 179 aa12.88□□□□□ -0.35
TM6SF1-201ENST00000258909 TMEM75Q8N9X5 138 aa12.88□□□□□ -0.35
TM6SF1-201ENST00000258909 C5orf17Q8NAS9 161 aa12.88□□□□□ -0.35
TM6SF1-201ENST00000258909 NHLRC2Q8NBF2 726 aa12.88□□□□□ -0.35
TM6SF1-201ENST00000258909 PSMG3Q9BT73 122 aaPredicted RBP12.88□□□□□ -0.35
TM6SF1-201ENST00000258909 PSG8Q9UQ74 426 aa12.88□□□□□ -0.35
TM6SF1-201ENST00000258909 EREGO14944 169 aa12.87□□□□□ -0.35
TM6SF1-201ENST00000258909 GCGP01275 180 aa12.87□□□□□ -0.35
TM6SF1-201ENST00000258909 EVI2AP22794 236 aa12.87□□□□□ -0.35
TM6SF1-201ENST00000258909 SUMO1P63165 101 aaKnown RBP12.87□□□□□ -0.35
TM6SF1-201ENST00000258909 MSRB1Q9NZV6 116 aa12.87□□□□□ -0.35
TM6SF1-201ENST00000258909 IGHV3-73A0A0B4J1V6 119 aa12.86□□□□□ -0.35
TM6SF1-201ENST00000258909 GGTLC3B5MD39 225 aa12.86□□□□□ -0.35
TM6SF1-201ENST00000258909 GATA1P15976 413 aaPredicted RBP12.86□□□□□ -0.35
TM6SF1-201ENST00000258909 ZNF876PQ49A33 203 aa12.86□□□□□ -0.35
TM6SF1-201ENST00000258909 DPPA3Q6W0C5 159 aa12.86□□□□□ -0.35
TM6SF1-201ENST00000258909 PRNTQ86SH4 94 aa12.86□□□□□ -0.35
TM6SF1-201ENST00000258909 SUN5Q8TC36 379 aa12.86□□□□□ -0.35
TM6SF1-201ENST00000258909 PGPEP1Q9NXJ5 209 aa12.86□□□□□ -0.35
TM6SF1-201ENST00000258909 A0A087WTM6 91 aa12.85□□□□□ -0.35
TM6SF1-201ENST00000258909 SERTM2A0A1B0GWG4 89 aa12.85□□□□□ -0.35
TM6SF1-201ENST00000258909 PTTG1O95997 202 aa12.85□□□□□ -0.35
TM6SF1-201ENST00000258909 IGLV2-11P01706 119 aa12.85□□□□□ -0.35
TM6SF1-201ENST00000258909 EPDR1Q9UM22 224 aa12.85□□□□□ -0.35
TM6SF1-201ENST00000258909 FBLL1A6NHQ2 334 aaKnown RBP12.85□□□□□ -0.35
TM6SF1-201ENST00000258909 K7EQM0 130 aa12.85□□□□□ -0.35
TM6SF1-201ENST00000258909 TAAR5O14804 337 aa12.85□□□□□ -0.35
TM6SF1-201ENST00000258909 MBP02144 154 aa12.85□□□□□ -0.35
TM6SF1-201ENST00000258909 CRYGDP07320 174 aa12.85□□□□□ -0.35
TM6SF1-201ENST00000258909 SERF2P84101 59 aa12.85□□□□□ -0.35
TM6SF1-201ENST00000258909 FLI1Q01543 452 aaPredicted RBP12.85□□□□□ -0.35
TM6SF1-201ENST00000258909 SLC25A29Q8N8R3 303 aa12.85□□□□□ -0.35
TM6SF1-201ENST00000258909 ACTR3CQ9C0K3 210 aaPredicted RBP12.85□□□□□ -0.35
TM6SF1-201ENST00000258909 BATF3Q9NR55 127 aa12.85□□□□□ -0.35
TM6SF1-201ENST00000258909 FAT1Q14517 4588 aa12.84□□□□□ -0.35
TM6SF1-201ENST00000258909 CXorf1O96002 111 aa12.84□□□□□ -0.35
TM6SF1-201ENST00000258909 PPT1P50897 306 aa12.84□□□□□ -0.35
TM6SF1-201ENST00000258909 CFAP126Q5VTH2 177 aa12.84□□□□□ -0.35
TM6SF1-201ENST00000258909 RPL7L1Q6DKI1 246 aaKnown RBP12.84□□□□□ -0.35
TM6SF1-201ENST00000258909 RS1O15537 224 aa12.83□□□□□ -0.36
TM6SF1-201ENST00000258909 PFN1P07737 140 aaKnown RBP12.83□□□□□ -0.36
TM6SF1-201ENST00000258909 SMUG1Q53HV7 270 aa12.83□□□□□ -0.36
TM6SF1-201ENST00000258909 CYB561D1Q8N8Q1 229 aa12.83□□□□□ -0.36
TM6SF1-201ENST00000258909 LINC00479Q96M42 142 aa12.83□□□□□ -0.36
TM6SF1-201ENST00000258909 TMEM167BQ9NRX6 74 aa12.83□□□□□ -0.36
TM6SF1-201ENST00000258909 TNFSF18Q9UNG2 199 aa12.83□□□□□ -0.36
TM6SF1-201ENST00000258909 TRAV34A0A0B4J273 112 aa12.82□□□□□ -0.36
TM6SF1-201ENST00000258909 PGPEP1LA6NFU8 196 aa12.82□□□□□ -0.36
TM6SF1-201ENST00000258909 ZFP69Q49AA0 526 aa12.82□□□□□ -0.36
TM6SF1-201ENST00000258909 C9orf85Q96MD7 179 aa12.82□□□□□ -0.36
TM6SF1-201ENST00000258909 FXYD6-FXYD2A0A087WZ82 144 aa12.81□□□□□ -0.36
TM6SF1-201ENST00000258909 K7EP13 123 aa12.81□□□□□ -0.36
TM6SF1-201ENST00000258909 GIPP09681 153 aaPredicted RBP12.81□□□□□ -0.36
TM6SF1-201ENST00000258909 ZNF726P1Q15940 193 aa12.81□□□□□ -0.36
TM6SF1-201ENST00000258909 ZNF506Q5JVG8 444 aa12.81□□□□□ -0.36
TM6SF1-201ENST00000258909 SH2D6Q7Z4S9 175 aa12.81□□□□□ -0.36
TM6SF1-201ENST00000258909 INO80EQ8NBZ0 244 aaPredicted RBP12.81□□□□□ -0.36
TM6SF1-201ENST00000258909 IGHV3-38A0A0C4DH36 116 aa12.8□□□□□ -0.36
TM6SF1-201ENST00000258909 RNF222A6NCQ9 220 aa12.8□□□□□ -0.36
TM6SF1-201ENST00000258909 RNASE3P12724 160 aaKnown RBP12.8□□□□□ -0.36
TM6SF1-201ENST00000258909 KRTAP10-1P60331 282 aa12.8□□□□□ -0.36
TM6SF1-201ENST00000258909 CDPF1Q6NVV7 123 aa12.8□□□□□ -0.36
TM6SF1-201ENST00000258909 TIRAPP58753 221 aa12.79□□□□□ -0.36
TM6SF1-201ENST00000258909 UBE2G2P60604 165 aa12.79□□□□□ -0.36
TM6SF1-201ENST00000258909 RHOHQ15669 191 aa12.79□□□□□ -0.36
TM6SF1-201ENST00000258909 C10orf126Q8N4M7 172 aa12.79□□□□□ -0.36
TM6SF1-201ENST00000258909 PRADC1Q9BSG0 188 aa12.79□□□□□ -0.36
TM6SF1-201ENST00000258909 TRBV6-4A0A1B0GX49 114 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms