RNA–Protein interactions for RNA: ENST00000258387.5

PAX3-201, Transcript of paired box 3, humanhuman

TSL 1 (best) BASIC

Gene PAX3, Length 958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-201ENST00000258387 NHLRC2Q8NBF2 726 aa12.63□□□□□ -0.39
PAX3-201ENST00000258387 TMED6Q8WW62 240 aa12.63□□□□□ -0.39
PAX3-201ENST00000258387 TRAV8-1A0A0A6YYK1 113 aa12.62□□□□□ -0.39
PAX3-201ENST00000258387 TRAV21A0A0B4J279 112 aa12.62□□□□□ -0.39
PAX3-201ENST00000258387 SSNA1O43805 119 aa12.62□□□□□ -0.39
PAX3-201ENST00000258387 GCSHP23434 173 aa12.62□□□□□ -0.39
PAX3-201ENST00000258387 IFITM3Q01628 133 aa12.62□□□□□ -0.39
PAX3-201ENST00000258387 TDRG1Q3Y452 100 aa12.62□□□□□ -0.39
PAX3-201ENST00000258387 TVP23CQ96ET8 276 aa12.62□□□□□ -0.39
PAX3-201ENST00000258387 TREM1Q9NP99 234 aa12.62□□□□□ -0.39
PAX3-201ENST00000258387 A0A1W2PPV4 95 aa12.61□□□□□ -0.39
PAX3-201ENST00000258387 HMGB3O15347 200 aaKnown RBP12.61□□□□□ -0.39
PAX3-201ENST00000258387 SMR3BP02814 79 aaPredicted RBP12.61□□□□□ -0.39
PAX3-201ENST00000258387 TYMSP04818 313 aa12.61□□□□□ -0.39
PAX3-201ENST00000258387 Q5VSD8 79 aa12.61□□□□□ -0.39
PAX3-201ENST00000258387 FRZBQ92765 325 aa12.61□□□□□ -0.39
PAX3-201ENST00000258387 SGK494Q96LW2 274 aa12.61□□□□□ -0.39
PAX3-201ENST00000258387 WFDC1Q9HC57 220 aa12.61□□□□□ -0.39
PAX3-201ENST00000258387 PPT1P50897 306 aa12.6□□□□□ -0.39
PAX3-201ENST00000258387 GNG5P63218 68 aa12.6□□□□□ -0.39
PAX3-201ENST00000258387 ACOT6Q3I5F7 207 aaPredicted RBP12.6□□□□□ -0.39
PAX3-201ENST00000258387 C10orf126Q8N4M7 172 aa12.6□□□□□ -0.39
PAX3-201ENST00000258387 SDF2L1Q9HCN8 221 aa12.6□□□□□ -0.39
PAX3-201ENST00000258387 PSCAO43653 123 aa12.59□□□□□ -0.39
PAX3-201ENST00000258387 PET100P0DJ07 73 aa12.59□□□□□ -0.39
PAX3-201ENST00000258387 RAB2AP61019 212 aa12.59□□□□□ -0.39
PAX3-201ENST00000258387 HAMPP81172 84 aa12.59□□□□□ -0.39
PAX3-201ENST00000258387 SH2D6Q7Z4S9 175 aa12.59□□□□□ -0.39
PAX3-201ENST00000258387 VPS13BQ7Z7G8 4022 aa12.59□□□□□ -0.39
PAX3-201ENST00000258387 IGHV3-38A0A0C4DH36 116 aa12.58□□□□□ -0.4
PAX3-201ENST00000258387 GATA1P15976 413 aaPredicted RBP12.58□□□□□ -0.4
PAX3-201ENST00000258387 PQLC2Q6ZP29 291 aa12.58□□□□□ -0.4
PAX3-201ENST00000258387 ASB13Q8WXK3 278 aa12.58□□□□□ -0.4
PAX3-201ENST00000258387 MARVELD1Q9BSK0 173 aa12.58□□□□□ -0.4
PAX3-201ENST00000258387 IGHV3-73A0A0B4J1V6 119 aa12.57□□□□□ -0.4
PAX3-201ENST00000258387 OR10G9Q8NGN4 311 aa12.57□□□□□ -0.4
PAX3-201ENST00000258387 OR10G7Q8NGN6 311 aa12.57□□□□□ -0.4
PAX3-201ENST00000258387 KCNS1Q96KK3 526 aa12.57□□□□□ -0.4
PAX3-201ENST00000258387 IGLV5-52A0A0A0MRZ9 124 aa12.56□□□□□ -0.4
PAX3-201ENST00000258387 FBLL1A6NHQ2 334 aaKnown RBP12.56□□□□□ -0.4
PAX3-201ENST00000258387 PFN1P07737 140 aaKnown RBP12.56□□□□□ -0.4
PAX3-201ENST00000258387 ZNF876PQ49A33 203 aa12.56□□□□□ -0.4
PAX3-201ENST00000258387 OR10J3Q5JRS4 329 aa12.56□□□□□ -0.4
PAX3-201ENST00000258387 ARL6IP6Q8N6S5 226 aa12.56□□□□□ -0.4
PAX3-201ENST00000258387 SLC25A29Q8N8R3 303 aa12.56□□□□□ -0.4
PAX3-201ENST00000258387 Q9HAA7 133 aa12.56□□□□□ -0.4
PAX3-201ENST00000258387 TRAV8-6A0A0B4J262 113 aa12.55□□□□□ -0.4
PAX3-201ENST00000258387 TIRAPP58753 221 aa12.55□□□□□ -0.4
PAX3-201ENST00000258387 LRCOL1A6NCL2 159 aa12.54□□□□□ -0.4
PAX3-201ENST00000258387 IBA57-AS1B1ANH7 110 aa12.54□□□□□ -0.4
PAX3-201ENST00000258387 IGHV3-30P01768 117 aa12.54□□□□□ -0.4
PAX3-201ENST00000258387 IGHV3-33P01772 117 aa12.54□□□□□ -0.4
PAX3-201ENST00000258387 IGHV3-30-3P0DP02 117 aa12.54□□□□□ -0.4
PAX3-201ENST00000258387 IGHV3-30-5P0DP03 117 aa12.54□□□□□ -0.4
PAX3-201ENST00000258387 ZNF80P51504 273 aaPredicted RBP12.54□□□□□ -0.4
PAX3-201ENST00000258387 LINC01556Q5JQF7 62 aa12.54□□□□□ -0.4
PAX3-201ENST00000258387 CFAP126Q5VTH2 177 aa12.54□□□□□ -0.4
PAX3-201ENST00000258387 DPPA3Q6W0C5 159 aa12.54□□□□□ -0.4
PAX3-201ENST00000258387 PRADC1Q9BSG0 188 aa12.54□□□□□ -0.4
PAX3-201ENST00000258387 NDFIP1Q9BT67 221 aa12.54□□□□□ -0.4
PAX3-201ENST00000258387 C11orf21Q9P2W6 132 aa12.54□□□□□ -0.4
PAX3-201ENST00000258387 RS1O15537 224 aa12.53□□□□□ -0.4
PAX3-201ENST00000258387 ARL14EPLP0DKL9 152 aa12.53□□□□□ -0.4
PAX3-201ENST00000258387 FAM229AH3BQW9 127 aa12.52□□□□□ -0.41
PAX3-201ENST00000258387 TAAR5O14804 337 aa12.52□□□□□ -0.41
PAX3-201ENST00000258387 TMEM75Q8N9X5 138 aa12.52□□□□□ -0.41
PAX3-201ENST00000258387 TRBV6-4A0A1B0GX49 114 aa12.51□□□□□ -0.41
PAX3-201ENST00000258387 PGPEP1LA6NFU8 196 aa12.51□□□□□ -0.41
PAX3-201ENST00000258387 GCGP01275 180 aa12.51□□□□□ -0.41
PAX3-201ENST00000258387 TCRAP04437 139 aa12.51□□□□□ -0.41
PAX3-201ENST00000258387 CDC34P49427 236 aaPredicted RBP12.51□□□□□ -0.41
PAX3-201ENST00000258387 RHOHQ15669 191 aa12.51□□□□□ -0.41
PAX3-201ENST00000258387 Q8N814 137 aa12.51□□□□□ -0.41
PAX3-201ENST00000258387 PSG8Q9UQ74 426 aa12.51□□□□□ -0.41
PAX3-201ENST00000258387 DMBT1Q9UGM3 2413 aaPredicted RBP12.51□□□□□ -0.41
PAX3-201ENST00000258387 K7EQM0 130 aa12.5□□□□□ -0.41
PAX3-201ENST00000258387 DEFA1P59665 94 aa12.5□□□□□ -0.41
PAX3-201ENST00000258387 DEFA3P59666 94 aa12.5□□□□□ -0.41
PAX3-201ENST00000258387 LELP1Q5T871 98 aa12.5□□□□□ -0.41
PAX3-201ENST00000258387 PRNTQ86SH4 94 aa12.5□□□□□ -0.41
PAX3-201ENST00000258387 HSD17B11Q8NBQ5 300 aa12.5□□□□□ -0.41
PAX3-201ENST00000258387 NTN5Q8WTR8 489 aaPredicted RBP12.5□□□□□ -0.41
PAX3-201ENST00000258387 RAB24Q969Q5 203 aa12.5□□□□□ -0.41
PAX3-201ENST00000258387 SERTM2A0A1B0GWG4 89 aa12.49□□□□□ -0.41
PAX3-201ENST00000258387 CIDEAO60543 219 aa12.49□□□□□ -0.41
PAX3-201ENST00000258387 STAG3L2P0CL84 134 aa12.49□□□□□ -0.41
PAX3-201ENST00000258387 STAG3L3P0CL85 134 aa12.49□□□□□ -0.41
PAX3-201ENST00000258387 GCHFRP30047 84 aa12.49□□□□□ -0.41
PAX3-201ENST00000258387 SUMO1P63165 101 aaKnown RBP12.49□□□□□ -0.41
PAX3-201ENST00000258387 ZNF506Q5JVG8 444 aa12.49□□□□□ -0.41
PAX3-201ENST00000258387 C5orf17Q8NAS9 161 aa12.49□□□□□ -0.41
PAX3-201ENST00000258387 ATP6V0E2Q8NHE4 81 aa12.49□□□□□ -0.41
PAX3-201ENST00000258387 C9orf85Q96MD7 179 aa12.49□□□□□ -0.41
PAX3-201ENST00000258387 GTSF1LQ9H1H1 148 aa12.49□□□□□ -0.41
PAX3-201ENST00000258387 MYCBP2O75592 4640 aa12.49□□□□□ -0.41
PAX3-201ENST00000258387 SMUG1Q53HV7 270 aa12.48□□□□□ -0.41
PAX3-201ENST00000258387 Q6ZSN1 163 aa12.48□□□□□ -0.41
PAX3-201ENST00000258387 TMEM70Q9BUB7 260 aa12.48□□□□□ -0.41
PAX3-201ENST00000258387 EPDR1Q9UM22 224 aa12.48□□□□□ -0.41
PAX3-201ENST00000258387 SRRM2Q9UQ35 2752 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms