RNA–Protein interactions for RNA: ENST00000257552.6

MSI1-201, Transcript of musashi RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSI1, Length 2,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1-201ENST00000257552 SVIPQ8NHG7 77 aa11.4□□□□□ -0.59
MSI1-201ENST00000257552 TRBV7-3A0A075B6L6 115 aa11.39□□□□□ -0.59
MSI1-201ENST00000257552 LINC01546A6NGU7 62 aa11.39□□□□□ -0.59
MSI1-201ENST00000257552 OR11H12B2RN74 326 aa11.39□□□□□ -0.59
MSI1-201ENST00000257552 B9A039 149 aa11.39□□□□□ -0.59
MSI1-201ENST00000257552 SPINK8P0C7L1 97 aa11.39□□□□□ -0.59
MSI1-201ENST00000257552 MORN3Q6PF18 240 aaPredicted RBP11.39□□□□□ -0.59
MSI1-201ENST00000257552 OR11H1Q8NG94 326 aa11.39□□□□□ -0.59
MSI1-201ENST00000257552 OR11H2Q8NH07 326 aa11.39□□□□□ -0.59
MSI1-201ENST00000257552 MT-ATP8P03928 68 aa11.39□□□□□ -0.59
MSI1-201ENST00000257552 FOXI1Q12951 378 aa11.39□□□□□ -0.59
MSI1-201ENST00000257552 Q6ZQT7 251 aa11.39□□□□□ -0.59
MSI1-201ENST00000257552 FANCD2OSQ96PS1 177 aa11.39□□□□□ -0.59
MSI1-201ENST00000257552 RAB1BQ9H0U4 201 aa11.39□□□□□ -0.59
MSI1-201ENST00000257552 MYO18BQ8IUG5 2567 aa11.38□□□□□ -0.59
MSI1-201ENST00000257552 SPRY2O43597 315 aa11.38□□□□□ -0.59
MSI1-201ENST00000257552 PSMB2P49721 201 aa11.38□□□□□ -0.59
MSI1-201ENST00000257552 TAL2Q16559 108 aa11.38□□□□□ -0.59
MSI1-201ENST00000257552 NFE4Q86UQ8 179 aa11.38□□□□□ -0.59
MSI1-201ENST00000257552 C21orf62Q9NYP8 219 aa11.38□□□□□ -0.59
MSI1-201ENST00000257552 C11orf21Q9P2W6 132 aa11.38□□□□□ -0.59
MSI1-201ENST00000257552 IGKV3D-20A0A0C4DH25 116 aa11.38□□□□□ -0.59
MSI1-201ENST00000257552 C8orf86Q6ZUL3 223 aa11.38□□□□□ -0.59
MSI1-201ENST00000257552 COX8CQ7Z4L0 72 aa11.38□□□□□ -0.59
MSI1-201ENST00000257552 ONECUT1Q9UBC0 465 aa11.38□□□□□ -0.59
MSI1-201ENST00000257552 MYMXA0A1B0GTQ4 84 aa11.37□□□□□ -0.59
MSI1-201ENST00000257552 LINC01549A6NIU2 74 aa11.37□□□□□ -0.59
MSI1-201ENST00000257552 F8W735 103 aaPredicted RBP11.37□□□□□ -0.59
MSI1-201ENST00000257552 SMCPP49901 116 aaPredicted RBP11.37□□□□□ -0.59
MSI1-201ENST00000257552 TCTEX1D4Q5JR98 221 aa11.37□□□□□ -0.59
MSI1-201ENST00000257552 CNFNQ9BYD5 112 aa11.37□□□□□ -0.59
MSI1-201ENST00000257552 LINC01548A6NM66 108 aa11.37□□□□□ -0.59
MSI1-201ENST00000257552 NBR2O15453 112 aa11.37□□□□□ -0.59
MSI1-201ENST00000257552 TGFAP01135 160 aa11.37□□□□□ -0.59
MSI1-201ENST00000257552 ZNF672Q499Z4 452 aaPredicted RBP11.37□□□□□ -0.59
MSI1-201ENST00000257552 ZFP2Q6ZN57 461 aa11.37□□□□□ -0.59
MSI1-201ENST00000257552 CDIP1Q9H305 208 aa11.37□□□□□ -0.59
MSI1-201ENST00000257552 KAAG1Q9UBP8 84 aa11.37□□□□□ -0.59
MSI1-201ENST00000257552 CELSR2Q9HCU4 2923 aa11.37□□□□□ -0.59
MSI1-201ENST00000257552 UCNP55089 124 aa11.37□□□□□ -0.59
MSI1-201ENST00000257552 TMEM190Q8WZ59 177 aa11.37□□□□□ -0.59
MSI1-201ENST00000257552 HLA-DRB4P13762 266 aa11.36□□□□□ -0.59
MSI1-201ENST00000257552 PLNP26678 52 aa11.36□□□□□ -0.59
MSI1-201ENST00000257552 HLA-DRB4X5D2U9 266 aa11.36□□□□□ -0.59
MSI1-201ENST00000257552 FHL3Q13643 280 aa11.36□□□□□ -0.59
MSI1-201ENST00000257552 NRACQ8N912 160 aa11.36□□□□□ -0.59
MSI1-201ENST00000257552 C1QTNF4Q9BXJ3 329 aa11.36□□□□□ -0.59
MSI1-201ENST00000257552 SPANXN1Q5VSR9 72 aa11.35□□□□□ -0.59
MSI1-201ENST00000257552 SCGB1D4Q6XE38 83 aa11.35□□□□□ -0.59
MSI1-201ENST00000257552 IGHV3-49A0A0A0MS15 119 aa11.35□□□□□ -0.59
MSI1-201ENST00000257552 J3KRW8 73 aa11.35□□□□□ -0.59
MSI1-201ENST00000257552 SRSF9Q13242 221 aaKnown RBP eCLIP11.35□□□□□ -0.59
MSI1-201ENST00000257552 DEFB104AQ8WTQ1 72 aa11.35□□□□□ -0.59
MSI1-201ENST00000257552 PSMG3-AS1Q96PY0 264 aa11.35□□□□□ -0.59
MSI1-201ENST00000257552 IGLV11-55A0A075B6I3 123 aa11.34□□□□□ -0.59
MSI1-201ENST00000257552 F8VRH5 84 aa11.34□□□□□ -0.59
MSI1-201ENST00000257552 H7C1H1 209 aa11.34□□□□□ -0.59
MSI1-201ENST00000257552 LGALS1P09382 135 aaKnown RBP11.34□□□□□ -0.59
MSI1-201ENST00000257552 NDPQ00604 133 aa11.34□□□□□ -0.59
MSI1-201ENST00000257552 LINC01559Q495D7 138 aa11.34□□□□□ -0.59
MSI1-201ENST00000257552 CFAP126Q5VTH2 177 aa11.34□□□□□ -0.59
MSI1-201ENST00000257552 SCGB3A1Q96QR1 104 aa11.34□□□□□ -0.59
MSI1-201ENST00000257552 XGP55808 180 aa11.34□□□□□ -0.59
MSI1-201ENST00000257552 TMEM78Q5T7P6 136 aa11.34□□□□□ -0.59
MSI1-201ENST00000257552 DLX4Q92988 240 aaPredicted RBP11.34□□□□□ -0.59
MSI1-201ENST00000257552 IGSF10Q6WRI0 2623 aa11.34□□□□□ -0.59
MSI1-201ENST00000257552 CTSGP08311 255 aa11.33□□□□□ -0.6
MSI1-201ENST00000257552 GATA3P23771 443 aa11.33□□□□□ -0.6
MSI1-201ENST00000257552 KLRD1Q13241 179 aa11.33□□□□□ -0.6
MSI1-201ENST00000257552 PLEKHB2Q96CS7 222 aa11.33□□□□□ -0.6
MSI1-201ENST00000257552 SRSF8Q9BRL6 282 aaKnown RBP11.33□□□□□ -0.6
MSI1-201ENST00000257552 ZNF815PA8K554 130 aa11.33□□□□□ -0.6
MSI1-201ENST00000257552 KLHL30-AS1Q8NEE0 82 aa11.33□□□□□ -0.6
MSI1-201ENST00000257552 PRADC1Q9BSG0 188 aa11.33□□□□□ -0.6
MSI1-201ENST00000257552 AGPAT4-IT1Q9H0P7 198 aa11.33□□□□□ -0.6
MSI1-201ENST00000257552 A0A1W2PPR1 153 aa11.32□□□□□ -0.6
MSI1-201ENST00000257552 LY6LH3BQJ8 138 aa11.32□□□□□ -0.6
MSI1-201ENST00000257552 H3BVH4 76 aa11.32□□□□□ -0.6
MSI1-201ENST00000257552 USP9XQ93008 2570 aaPredicted RBP11.32□□□□□ -0.6
MSI1-201ENST00000257552 SLC25A16P16260 332 aa11.31□□□□□ -0.6
MSI1-201ENST00000257552 C5orf64Q2M2E5 130 aa11.31□□□□□ -0.6
MSI1-201ENST00000257552 Q6ZUT4 128 aa11.31□□□□□ -0.6
MSI1-201ENST00000257552 RNF5Q99942 180 aa11.31□□□□□ -0.6
MSI1-201ENST00000257552 EMP1P54849 157 aa11.31□□□□□ -0.6
MSI1-201ENST00000257552 RNF183Q96D59 192 aa11.31□□□□□ -0.6
MSI1-201ENST00000257552 TSPAN13O95857 204 aa11.31□□□□□ -0.6
MSI1-201ENST00000257552 FAM208BQ5VWN6 2430 aa11.3□□□□□ -0.6
MSI1-201ENST00000257552 IGHV7-4-1A0A0J9YVY3 117 aa11.3□□□□□ -0.6
MSI1-201ENST00000257552 SRSF2Q01130 221 aaKnown RBP11.3□□□□□ -0.6
MSI1-201ENST00000257552 DPM3Q9P2X0 92 aa11.3□□□□□ -0.6
MSI1-201ENST00000257552 PRSS29PA6NIE9 313 aa11.3□□□□□ -0.6
MSI1-201ENST00000257552 M0R381 172 aa11.3□□□□□ -0.6
MSI1-201ENST00000257552 CARD19Q96LW7 228 aa11.3□□□□□ -0.6
MSI1-201ENST00000257552 SMIM2Q9BVW6 85 aa11.3□□□□□ -0.6
MSI1-201ENST00000257552 RPL39LQ96EH5 51 aaKnown RBP11.29□□□□□ -0.6
MSI1-201ENST00000257552 KIR2DL4Q99706 377 aa11.29□□□□□ -0.6
MSI1-201ENST00000257552 HIF1ANQ9NWT6 349 aa11.29□□□□□ -0.6
MSI1-201ENST00000257552 FBXL19-AS1Q494R0 122 aa11.29□□□□□ -0.6
MSI1-201ENST00000257552 POLQO75417 2590 aa11.28□□□□□ -0.6
MSI1-201ENST00000257552 TMEM238LA0A1B0GVL6 79 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms