RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 MLANAQ16655 118 aa10.35□□□□□ -0.75
PRPF38A-201ENST00000257181 ADAMTSL5Q6ZMM2 481 aa10.35□□□□□ -0.75
PRPF38A-201ENST00000257181 H7C423 109 aa10.35□□□□□ -0.75
PRPF38A-201ENST00000257181 P0DMU3 169 aa10.35□□□□□ -0.75
PRPF38A-201ENST00000257181 FAM231AP0DMU4 169 aa10.35□□□□□ -0.75
PRPF38A-201ENST00000257181 FAM231CP0DMU5 169 aa10.35□□□□□ -0.75
PRPF38A-201ENST00000257181 TRAV13-1A0A0B4J241 112 aa10.34□□□□□ -0.75
PRPF38A-201ENST00000257181 GSN-AS1Q9NRJ2 163 aa10.34□□□□□ -0.75
PRPF38A-201ENST00000257181 ZNF25P17030 456 aaPredicted RBP10.34□□□□□ -0.75
PRPF38A-201ENST00000257181 HERV-K104P63124 156 aa10.34□□□□□ -0.75
PRPF38A-201ENST00000257181 TDRG1Q3Y452 100 aa10.34□□□□□ -0.75
PRPF38A-201ENST00000257181 Q5BKY6 102 aa10.34□□□□□ -0.75
PRPF38A-201ENST00000257181 PRIMA1Q86XR5 153 aa10.34□□□□□ -0.75
PRPF38A-201ENST00000257181 A8MWP6 167 aa10.34□□□□□ -0.75
PRPF38A-201ENST00000257181 ODF3L1Q8IXM7 274 aa10.34□□□□□ -0.75
PRPF38A-201ENST00000257181 HHLA3Q9XRX5 114 aa10.34□□□□□ -0.75
PRPF38A-201ENST00000257181 GAGE6Q13070 117 aa10.34□□□□□ -0.75
PRPF38A-201ENST00000257181 ABCA4P78363 2273 aa10.33□□□□□ -0.76
PRPF38A-201ENST00000257181 TRAV12-2A0A075B6T6 113 aa10.33□□□□□ -0.76
PRPF38A-201ENST00000257181 TRAV8-3A0A0A6YYJ7 113 aa10.33□□□□□ -0.76
PRPF38A-201ENST00000257181 H7C2G1 150 aa10.33□□□□□ -0.76
PRPF38A-201ENST00000257181 MSMPQ1L6U9 139 aa10.33□□□□□ -0.76
PRPF38A-201ENST00000257181 IGFL4Q6B9Z1 124 aa10.33□□□□□ -0.76
PRPF38A-201ENST00000257181 IL15RAQ13261 267 aa10.33□□□□□ -0.76
PRPF38A-201ENST00000257181 NIT1Q86X76 327 aa10.33□□□□□ -0.76
PRPF38A-201ENST00000257181 NCKAP5O14513 1909 aa10.33□□□□□ -0.76
PRPF38A-201ENST00000257181 DEFB135Q30KP9 77 aa10.33□□□□□ -0.76
PRPF38A-201ENST00000257181 APRG1Q8IVJ8 170 aa10.33□□□□□ -0.76
PRPF38A-201ENST00000257181 AGPAT4-IT1Q9H0P7 198 aa10.33□□□□□ -0.76
PRPF38A-201ENST00000257181 A0A0J9YX75 114 aa10.33□□□□□ -0.76
PRPF38A-201ENST00000257181 IGKV1OR2-108A0A075B7D4 117 aa10.32□□□□□ -0.76
PRPF38A-201ENST00000257181 PAM16Q9Y3D7 125 aa10.32□□□□□ -0.76
PRPF38A-201ENST00000257181 TP53BP1Q12888 1972 aaPredicted RBP10.32□□□□□ -0.76
PRPF38A-201ENST00000257181 IGLL5B9A064 214 aa10.32□□□□□ -0.76
PRPF38A-201ENST00000257181 UBE2BP63146 152 aa10.32□□□□□ -0.76
PRPF38A-201ENST00000257181 ZFP2Q6ZN57 461 aa10.32□□□□□ -0.76
PRPF38A-201ENST00000257181 DIDO1Q9BTC0 2240 aaKnown RBP10.32□□□□□ -0.76
PRPF38A-201ENST00000257181 IGLL1P15814 213 aa10.31□□□□□ -0.76
PRPF38A-201ENST00000257181 LINC00479Q96M42 142 aa10.31□□□□□ -0.76
PRPF38A-201ENST00000257181 SCGB1A1P11684 91 aa10.31□□□□□ -0.76
PRPF38A-201ENST00000257181 LURAP1LQ8IV03 231 aa10.31□□□□□ -0.76
PRPF38A-201ENST00000257181 TMEM61Q8N0U2 210 aa10.31□□□□□ -0.76
PRPF38A-201ENST00000257181 FNDC4Q9H6D8 234 aaPredicted RBP10.31□□□□□ -0.76
PRPF38A-201ENST00000257181 IGKV1-17P01599 117 aa10.31□□□□□ -0.76
PRPF38A-201ENST00000257181 ATXN8Q156A1 80 aa10.3□□□□□ -0.76
PRPF38A-201ENST00000257181 IGKV3D-20A0A0C4DH25 116 aa10.3□□□□□ -0.76
PRPF38A-201ENST00000257181 PSMB8P28062 276 aa10.3□□□□□ -0.76
PRPF38A-201ENST00000257181 CRIP2P52943 208 aaPredicted RBP10.29□□□□□ -0.76
PRPF38A-201ENST00000257181 LINC01545Q5VT33 79 aa10.29□□□□□ -0.76
PRPF38A-201ENST00000257181 ZNF295-AS1Q8N0V1 137 aa10.29□□□□□ -0.76
PRPF38A-201ENST00000257181 ZNF503Q96F45 646 aa10.29□□□□□ -0.76
PRPF38A-201ENST00000257181 RSPO3Q9BXY4 272 aaPredicted RBP10.29□□□□□ -0.76
PRPF38A-201ENST00000257181 WIPF3A6NGB9 483 aa10.29□□□□□ -0.76
PRPF38A-201ENST00000257181 Q8N6K4 173 aa10.29□□□□□ -0.76
PRPF38A-201ENST00000257181 A0A0J9YY99 117 aa10.29□□□□□ -0.76
PRPF38A-201ENST00000257181 PGPEP1LA6NFU8 196 aa10.29□□□□□ -0.76
PRPF38A-201ENST00000257181 SMIM2Q9BVW6 85 aa10.29□□□□□ -0.76
PRPF38A-201ENST00000257181 TP53TG1Q9Y2A0 90 aa10.29□□□□□ -0.76
PRPF38A-201ENST00000257181 H3BMM0 161 aa10.28□□□□□ -0.76
PRPF38A-201ENST00000257181 UBE2WQ96B02 151 aa10.28□□□□□ -0.76
PRPF38A-201ENST00000257181 DOCK9Q9BZ29 2069 aa10.28□□□□□ -0.76
PRPF38A-201ENST00000257181 TIRAPP58753 221 aa10.28□□□□□ -0.76
PRPF38A-201ENST00000257181 DYNAPQ8N1N2 210 aa10.28□□□□□ -0.76
PRPF38A-201ENST00000257181 IGHV3-16A0A0C4DH30 117 aa10.28□□□□□ -0.76
PRPF38A-201ENST00000257181 C2orf66Q6UXQ4 117 aa10.28□□□□□ -0.76
PRPF38A-201ENST00000257181 DEFB131BA0A096LNP1 70 aa10.27□□□□□ -0.76
PRPF38A-201ENST00000257181 K7EQG2 157 aa10.27□□□□□ -0.76
PRPF38A-201ENST00000257181 PRSS29PA6NIE9 313 aa10.27□□□□□ -0.76
PRPF38A-201ENST00000257181 COX7A2LO14548 114 aa10.27□□□□□ -0.76
PRPF38A-201ENST00000257181 SSBP4Q9BWG4 385 aaPredicted RBP10.27□□□□□ -0.76
PRPF38A-201ENST00000257181 NDUFA1O15239 70 aa10.27□□□□□ -0.77
PRPF38A-201ENST00000257181 CRYGBP07316 175 aa10.27□□□□□ -0.77
PRPF38A-201ENST00000257181 TMEM126AQ9H061 195 aa10.27□□□□□ -0.77
PRPF38A-201ENST00000257181 TRBV7-3A0A075B6L6 115 aa10.27□□□□□ -0.77
PRPF38A-201ENST00000257181 DEFB125Q8N687 156 aa10.27□□□□□ -0.77
PRPF38A-201ENST00000257181 FANCD2OSQ96PS1 177 aa10.27□□□□□ -0.77
PRPF38A-201ENST00000257181 GAGE10A6NGK3 116 aa10.26□□□□□ -0.77
PRPF38A-201ENST00000257181 SELENOKQ9Y6D0 94 aa10.26□□□□□ -0.77
PRPF38A-201ENST00000257181 ZNF407Q9C0G0 2248 aa10.26□□□□□ -0.77
PRPF38A-201ENST00000257181 NXPH4O95158 308 aa10.26□□□□□ -0.77
PRPF38A-201ENST00000257181 IGLV1-40P01703 118 aa10.26□□□□□ -0.77
PRPF38A-201ENST00000257181 ERG28Q9UKR5 140 aa10.26□□□□□ -0.77
PRPF38A-201ENST00000257181 DMRT1Q9Y5R6 373 aa10.26□□□□□ -0.77
PRPF38A-201ENST00000257181 SMIM27A0A1W2PRY6 76 aa10.25□□□□□ -0.77
PRPF38A-201ENST00000257181 WISP2O76076 250 aa10.25□□□□□ -0.77
PRPF38A-201ENST00000257181 ZFHX2Q9C0A1 2572 aaPredicted RBP10.25□□□□□ -0.77
PRPF38A-201ENST00000257181 CAMK2N2Q96S95 79 aa10.25□□□□□ -0.77
PRPF38A-201ENST00000257181 FAM110AQ9BQ89 295 aa10.25□□□□□ -0.77
PRPF38A-201ENST00000257181 TRAV13-2A0A0B4J235 113 aa10.25□□□□□ -0.77
PRPF38A-201ENST00000257181 HSD52Q0P140 79 aa10.25□□□□□ -0.77
PRPF38A-201ENST00000257181 SLC25A29Q8N8R3 303 aa10.25□□□□□ -0.77
PRPF38A-201ENST00000257181 C4orf48Q5BLP8 95 aa10.24□□□□□ -0.77
PRPF38A-201ENST00000257181 VPS25Q9BRG1 176 aa10.24□□□□□ -0.77
PRPF38A-201ENST00000257181 COL4A2P08572 1712 aa10.24□□□□□ -0.77
PRPF38A-201ENST00000257181 SERF1AO75920 110 aa10.23□□□□□ -0.77
PRPF38A-201ENST00000257181 CCDC140Q96MF4 163 aa10.23□□□□□ -0.77
PRPF38A-201ENST00000257181 HIST2H2BCQ6DN03 193 aa10.23□□□□□ -0.77
PRPF38A-201ENST00000257181 C5orf30Q96GV9 206 aa10.23□□□□□ -0.77
PRPF38A-201ENST00000257181 ZC2HC1AQ96GY0 325 aa10.23□□□□□ -0.77
PRPF38A-201ENST00000257181 OTOGLQ3ZCN5 2332 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 139.7 ms