RNA–Protein interactions for RNA: ENST00000254109.9

CLUHP3-201, Transcript of clustered mitochondria homolog pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CLUHP3, Length 1,812 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLUHP3-201ENST00000254109 C10orf99Q6UWK7 81 aa8.66□□□□□ -1.02
CLUHP3-201ENST00000254109 LCNL1Q6ZST4 164 aa8.66□□□□□ -1.02
CLUHP3-201ENST00000254109 LINC00477Q96M19 166 aa8.66□□□□□ -1.02
CLUHP3-201ENST00000254109 C2orf88Q9BSF0 95 aa8.66□□□□□ -1.02
CLUHP3-201ENST00000254109 MAP1LC3CQ9BXW4 147 aa8.66□□□□□ -1.02
CLUHP3-201ENST00000254109 TMEM191AQ9H0A3 160 aa8.66□□□□□ -1.02
CLUHP3-201ENST00000254109 DAZ1Q9NQZ3 744 aaKnown RBP8.66□□□□□ -1.02
CLUHP3-201ENST00000254109 TMEM89A2RUT3 159 aa8.65□□□□□ -1.02
CLUHP3-201ENST00000254109 K7EMT4 169 aa8.65□□□□□ -1.02
CLUHP3-201ENST00000254109 CKS2P33552 79 aa8.65□□□□□ -1.02
CLUHP3-201ENST00000254109 MRPL52Q86TS9 123 aaKnown RBP8.65□□□□□ -1.02
CLUHP3-201ENST00000254109 Q8N2B8 174 aa8.65□□□□□ -1.02
CLUHP3-201ENST00000254109 C20orf173Q96LM9 149 aa8.65□□□□□ -1.02
CLUHP3-201ENST00000254109 RHPN1-AS1Q9BWJ2 59 aa8.65□□□□□ -1.02
CLUHP3-201ENST00000254109 CNFNQ9BYD5 112 aa8.65□□□□□ -1.02
CLUHP3-201ENST00000254109 NIPBLQ6KC79 2804 aaeCLIP8.65□□□□□ -1.03
CLUHP3-201ENST00000254109 TRAV9-2A0A087WT02 112 aa8.64□□□□□ -1.03
CLUHP3-201ENST00000254109 SYS1-DBNDD2H3BUS1 97 aa8.64□□□□□ -1.03
CLUHP3-201ENST00000254109 CRXO43186 299 aaPredicted RBP8.64□□□□□ -1.03
CLUHP3-201ENST00000254109 PSMB8P28062 276 aa8.64□□□□□ -1.03
CLUHP3-201ENST00000254109 ZNF575Q86XF7 245 aa8.64□□□□□ -1.03
CLUHP3-201ENST00000254109 ATOH7Q8N100 152 aa8.64□□□□□ -1.03
CLUHP3-201ENST00000254109 IGKV3D-20A0A0C4DH25 116 aa8.64□□□□□ -1.03
CLUHP3-201ENST00000254109 LOC389332A0A1B0GUA5 103 aa8.64□□□□□ -1.03
CLUHP3-201ENST00000254109 SOCS3O14543 225 aa8.64□□□□□ -1.03
CLUHP3-201ENST00000254109 PPBPP02775 128 aa8.64□□□□□ -1.03
CLUHP3-201ENST00000254109 IFI27P40305 119 aaPredicted RBP8.64□□□□□ -1.03
CLUHP3-201ENST00000254109 TM4SF20Q53R12 229 aa8.64□□□□□ -1.03
CLUHP3-201ENST00000254109 GPHB5Q86YW7 130 aa8.64□□□□□ -1.03
CLUHP3-201ENST00000254109 OR10AG1Q8NH19 301 aa8.64□□□□□ -1.03
CLUHP3-201ENST00000254109 UQCR10Q9UDW1 63 aa8.64□□□□□ -1.03
CLUHP3-201ENST00000254109 SMPXQ9UHP9 88 aa8.64□□□□□ -1.03
CLUHP3-201ENST00000254109 UFC1Q9Y3C8 167 aa8.64□□□□□ -1.03
CLUHP3-201ENST00000254109 SAMD13Q5VXD3 122 aa8.63□□□□□ -1.03
CLUHP3-201ENST00000254109 PET117Q6UWS5 81 aa8.63□□□□□ -1.03
CLUHP3-201ENST00000254109 SMIM15Q7Z3B0 74 aa8.63□□□□□ -1.03
CLUHP3-201ENST00000254109 SIGLEC8Q9NYZ4 499 aa8.63□□□□□ -1.03
CLUHP3-201ENST00000254109 TIMM8BQ9Y5J9 83 aaPredicted RBP8.63□□□□□ -1.03
CLUHP3-201ENST00000254109 JMJD1CQ15652 2540 aa8.63□□□□□ -1.03
CLUHP3-201ENST00000254109 FOXE3Q13461 319 aa8.62□□□□□ -1.03
CLUHP3-201ENST00000254109 SNHG12Q9BXW3 62 aa8.62□□□□□ -1.03
CLUHP3-201ENST00000254109 C2CD3Q4AC94 2353 aa8.61□□□□□ -1.03
CLUHP3-201ENST00000254109 IGKV3-7A0A075B6H7 116 aa8.61□□□□□ -1.03
CLUHP3-201ENST00000254109 OR4C46A6NHA9 309 aa8.61□□□□□ -1.03
CLUHP3-201ENST00000254109 EREGO14944 169 aa8.61□□□□□ -1.03
CLUHP3-201ENST00000254109 IGLC3P0DOY3 106 aa8.61□□□□□ -1.03
CLUHP3-201ENST00000254109 ID1P41134 155 aa8.61□□□□□ -1.03
CLUHP3-201ENST00000254109 CACNG7P62955 275 aa8.61□□□□□ -1.03
CLUHP3-201ENST00000254109 HIST2H2BDQ6DRA6 164 aa8.61□□□□□ -1.03
CLUHP3-201ENST00000254109 LINC00173Q6ZV60 143 aa8.61□□□□□ -1.03
CLUHP3-201ENST00000254109 LINC01006Q8NI28 216 aa8.61□□□□□ -1.03
CLUHP3-201ENST00000254109 MSRB1Q9NZV6 116 aa8.61□□□□□ -1.03
CLUHP3-201ENST00000254109 C11orf21Q9P2W6 132 aa8.61□□□□□ -1.03
CLUHP3-201ENST00000254109 LAMTOR2Q9Y2Q5 125 aa8.61□□□□□ -1.03
CLUHP3-201ENST00000254109 TRAV21A0A0B4J279 112 aa8.61□□□□□ -1.03
CLUHP3-201ENST00000254109 A0A1B0GV90 55 aa8.61□□□□□ -1.03
CLUHP3-201ENST00000254109 MAP1LC3AQ9H492 121 aa8.61□□□□□ -1.03
CLUHP3-201ENST00000254109 C16orf95Q9H693 158 aa8.61□□□□□ -1.03
CLUHP3-201ENST00000254109 HSBP1L1C9JCN9 74 aa8.6□□□□□ -1.03
CLUHP3-201ENST00000254109 SMKR1H3BMG3 65 aa8.6□□□□□ -1.03
CLUHP3-201ENST00000254109 SPANXN1Q5VSR9 72 aa8.6□□□□□ -1.03
CLUHP3-201ENST00000254109 Q6ZN92 141 aa8.6□□□□□ -1.03
CLUHP3-201ENST00000254109 SPATA12Q7Z6I5 190 aa8.6□□□□□ -1.03
CLUHP3-201ENST00000254109 PRIMA1Q86XR5 153 aa8.6□□□□□ -1.03
CLUHP3-201ENST00000254109 OR8A1Q8NGG7 326 aa8.6□□□□□ -1.03
CLUHP3-201ENST00000254109 RNF185Q96GF1 192 aa8.6□□□□□ -1.03
CLUHP3-201ENST00000254109 TRBV7-9A0A0J9YWB2 115 aa8.59□□□□□ -1.03
CLUHP3-201ENST00000254109 H0Y8G0 127 aa8.59□□□□□ -1.03
CLUHP3-201ENST00000254109 J3KRW8 73 aa8.59□□□□□ -1.03
CLUHP3-201ENST00000254109 NDUFA7O95182 113 aa8.59□□□□□ -1.03
CLUHP3-201ENST00000254109 NCR2O95944 276 aa8.59□□□□□ -1.03
CLUHP3-201ENST00000254109 NPYP01303 97 aa8.59□□□□□ -1.03
CLUHP3-201ENST00000254109 ELANEP08246 267 aa8.59□□□□□ -1.03
CLUHP3-201ENST00000254109 HNRNPA3P51991 378 aaKnown RBP8.59□□□□□ -1.03
CLUHP3-201ENST00000254109 MAJINQ3KP22 176 aa8.59□□□□□ -1.03
CLUHP3-201ENST00000254109 ZFAND2AQ8N6M9 145 aa8.59□□□□□ -1.03
CLUHP3-201ENST00000254109 ZNF747Q9BV97 191 aa8.59□□□□□ -1.03
CLUHP3-201ENST00000254109 IGHV4-4A0A075B6R2 117 aa8.59□□□□□ -1.03
CLUHP3-201ENST00000254109 RPLP1P05386 114 aaKnown RBP8.59□□□□□ -1.03
CLUHP3-201ENST00000254109 ANKRD39Q53RE8 183 aa8.59□□□□□ -1.03
CLUHP3-201ENST00000254109 PRR9Q5T870 116 aa8.59□□□□□ -1.03
CLUHP3-201ENST00000254109 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.59□□□□□ -1.03
CLUHP3-201ENST00000254109 SNAI2O43623 268 aa8.58□□□□□ -1.04
CLUHP3-201ENST00000254109 HBDP02042 147 aa8.58□□□□□ -1.04
CLUHP3-201ENST00000254109 IGLL1P15814 213 aa8.58□□□□□ -1.04
CLUHP3-201ENST00000254109 C11orf44Q8N8P7 122 aa8.58□□□□□ -1.04
CLUHP3-201ENST00000254109 FAM19A4Q96LR4 140 aa8.58□□□□□ -1.04
CLUHP3-201ENST00000254109 NXT2Q9NPJ8 142 aaKnown RBP8.58□□□□□ -1.04
CLUHP3-201ENST00000254109 SETD2Q9BYW2 2564 aaPredicted RBP8.58□□□□□ -1.04
CLUHP3-201ENST00000254109 H3BVH4 76 aa8.57□□□□□ -1.04
CLUHP3-201ENST00000254109 TNFRSF6BO95407 300 aa8.57□□□□□ -1.04
CLUHP3-201ENST00000254109 LGALS1P09382 135 aaKnown RBP8.57□□□□□ -1.04
CLUHP3-201ENST00000254109 S100A4P26447 101 aaKnown RBP8.57□□□□□ -1.04
CLUHP3-201ENST00000254109 RNASE4P34096 147 aaKnown RBP8.57□□□□□ -1.04
CLUHP3-201ENST00000254109 ASIPP42127 132 aa8.57□□□□□ -1.04
CLUHP3-201ENST00000254109 TCTEX1D4Q5JR98 221 aa8.57□□□□□ -1.04
CLUHP3-201ENST00000254109 WFDC3Q8IUB2 231 aa8.57□□□□□ -1.04
CLUHP3-201ENST00000254109 ST20Q9HBF5 79 aa8.57□□□□□ -1.04
CLUHP3-201ENST00000254109 F6UB75 175 aa8.57□□□□□ -1.04
CLUHP3-201ENST00000254109 EVI2AP22794 236 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms