RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 HIST1H4GQ99525 98 aa14.52□□□□□ -0.08
SNX4-201ENST00000251775 INSL3P51460 131 aa14.52□□□□□ -0.09
SNX4-201ENST00000251775 ECSCRQ19T08 205 aa14.52□□□□□ -0.09
SNX4-201ENST00000251775 NRACQ8N912 160 aa14.52□□□□□ -0.09
SNX4-201ENST00000251775 ATP6V0E1O15342 81 aa14.51□□□□□ -0.09
SNX4-201ENST00000251775 LAGE3Q14657 143 aa14.51□□□□□ -0.09
SNX4-201ENST00000251775 FAM110DQ8TAY7 271 aaPredicted RBP14.51□□□□□ -0.09
SNX4-201ENST00000251775 ASH1LQ9NR48 2969 aaKnown RBP14.51□□□□□ -0.09
SNX4-201ENST00000251775 IGKV3D-20A0A0C4DH25 116 aa14.51□□□□□ -0.09
SNX4-201ENST00000251775 CACNA1BQ00975 2339 aa14.5□□□□□ -0.09
SNX4-201ENST00000251775 C15orf32Q32M92 178 aa14.5□□□□□ -0.09
SNX4-201ENST00000251775 IL17RELQ6ZVW7 336 aa14.5□□□□□ -0.09
SNX4-201ENST00000251775 TRAV26-2A0A0B4J265 109 aa14.5□□□□□ -0.09
SNX4-201ENST00000251775 A0A1B0GWB2 263 aa14.5□□□□□ -0.09
SNX4-201ENST00000251775 LINC01548A6NM66 108 aa14.5□□□□□ -0.09
SNX4-201ENST00000251775 PRSS47A8MTI9 375 aa14.5□□□□□ -0.09
SNX4-201ENST00000251775 C11orf21Q9P2W6 132 aa14.5□□□□□ -0.09
SNX4-201ENST00000251775 PRORYQ9H606 182 aa14.49□□□□□ -0.09
SNX4-201ENST00000251775 SCGB2A1O75556 95 aa14.49□□□□□ -0.09
SNX4-201ENST00000251775 PLNP26678 52 aa14.48□□□□□ -0.09
SNX4-201ENST00000251775 ATP5G2Q06055 141 aa14.48□□□□□ -0.09
SNX4-201ENST00000251775 SVEP1Q4LDE5 3571 aa14.48□□□□□ -0.09
SNX4-201ENST00000251775 G3V318 75 aa14.48□□□□□ -0.09
SNX4-201ENST00000251775 GNLYP22749 145 aa14.48□□□□□ -0.09
SNX4-201ENST00000251775 CLUHP3Q96NS8 147 aa14.48□□□□□ -0.09
SNX4-201ENST00000251775 CLEC3BP05452 202 aa14.47□□□□□ -0.09
SNX4-201ENST00000251775 RNF182Q8N6D2 247 aa14.47□□□□□ -0.09
SNX4-201ENST00000251775 ZFAND3Q9H8U3 227 aa14.47□□□□□ -0.09
SNX4-201ENST00000251775 CENPVL3A0A0U1RRI6 287 aa14.47□□□□□ -0.09
SNX4-201ENST00000251775 LINC01619G3V211 115 aa14.47□□□□□ -0.09
SNX4-201ENST00000251775 NPFFO15130 113 aa14.47□□□□□ -0.09
SNX4-201ENST00000251775 KLK9Q2XQG4 91 aa14.47□□□□□ -0.09
SNX4-201ENST00000251775 MORN3Q6PF18 240 aaPredicted RBP14.47□□□□□ -0.09
SNX4-201ENST00000251775 KLK9Q9UKQ9 250 aa14.47□□□□□ -0.09
SNX4-201ENST00000251775 IGHV7-4-1A0A0J9YVY3 117 aa14.46□□□□□ -0.09
SNX4-201ENST00000251775 RAB9AP51151 201 aa14.46□□□□□ -0.1
SNX4-201ENST00000251775 F8VRH5 84 aa14.45□□□□□ -0.1
SNX4-201ENST00000251775 CCDC140Q96MF4 163 aa14.45□□□□□ -0.1
SNX4-201ENST00000251775 UFC1Q9Y3C8 167 aa14.45□□□□□ -0.1
SNX4-201ENST00000251775 ABCA2Q9BZC7 2435 aa14.45□□□□□ -0.1
SNX4-201ENST00000251775 MYMXA0A1B0GTQ4 84 aa14.45□□□□□ -0.1
SNX4-201ENST00000251775 LCNL1Q6ZST4 164 aa14.45□□□□□ -0.1
SNX4-201ENST00000251775 H7C1H1 209 aa14.44□□□□□ -0.1
SNX4-201ENST00000251775 BUB3O43684 328 aa14.44□□□□□ -0.1
SNX4-201ENST00000251775 CKS1BP61024 79 aa14.44□□□□□ -0.1
SNX4-201ENST00000251775 TCTEX1D4Q5JR98 221 aa14.44□□□□□ -0.1
SNX4-201ENST00000251775 CLEC19AQ6UXS0 136 aa14.44□□□□□ -0.1
SNX4-201ENST00000251775 C20orf78Q9BR46 151 aa14.44□□□□□ -0.1
SNX4-201ENST00000251775 TRAV12-1A0A0B4J245 112 aa14.44□□□□□ -0.1
SNX4-201ENST00000251775 RBAKDNA6NC62 111 aa14.44□□□□□ -0.1
SNX4-201ENST00000251775 OR11H12B2RN74 326 aa14.44□□□□□ -0.1
SNX4-201ENST00000251775 OR11H1Q8NG94 326 aa14.44□□□□□ -0.1
SNX4-201ENST00000251775 OR11H2Q8NH07 326 aa14.44□□□□□ -0.1
SNX4-201ENST00000251775 AGPAT4-IT1Q9H0P7 198 aa14.44□□□□□ -0.1
SNX4-201ENST00000251775 CLPSL1A2RUU4 121 aa14.43□□□□□ -0.1
SNX4-201ENST00000251775 IGHV4-39P01824 125 aa14.43□□□□□ -0.1
SNX4-201ENST00000251775 CYSLTR1Q9Y271 337 aa14.43□□□□□ -0.1
SNX4-201ENST00000251775 IGHV3OR16-10A0A075B7F0 116 aa14.43□□□□□ -0.1
SNX4-201ENST00000251775 IGHV3-66A0A0C4DH42 116 aa14.43□□□□□ -0.1
SNX4-201ENST00000251775 APOMO95445 188 aa14.43□□□□□ -0.1
SNX4-201ENST00000251775 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.43□□□□□ -0.1
SNX4-201ENST00000251775 C5orf56Q8N8D9 126 aa14.43□□□□□ -0.1
SNX4-201ENST00000251775 ITPR1Q14643 2758 aa14.42□□□□□ -0.1
SNX4-201ENST00000251775 TMEM219Q86XT9 240 aa14.42□□□□□ -0.1
SNX4-201ENST00000251775 HOXA3O43365 443 aaPredicted RBP14.42□□□□□ -0.1
SNX4-201ENST00000251775 SMCPP49901 116 aaPredicted RBP14.42□□□□□ -0.1
SNX4-201ENST00000251775 Q6ZQT7 251 aa14.42□□□□□ -0.1
SNX4-201ENST00000251775 IGHV3OR16-13A0A075B7E8 117 aa14.41□□□□□ -0.1
SNX4-201ENST00000251775 IGHV3-74A0A0B4J1X5 117 aa14.41□□□□□ -0.1
SNX4-201ENST00000251775 LGALS1P09382 135 aaKnown RBP14.41□□□□□ -0.1
SNX4-201ENST00000251775 FOXI1Q12951 378 aa14.41□□□□□ -0.1
SNX4-201ENST00000251775 PGPEP1Q9NXJ5 209 aa14.41□□□□□ -0.1
SNX4-201ENST00000251775 CFAP126Q5VTH2 177 aa14.41□□□□□ -0.1
SNX4-201ENST00000251775 SMIM2Q9BVW6 85 aa14.41□□□□□ -0.1
SNX4-201ENST00000251775 IGHV4-4A0A075B6R2 117 aa14.4□□□□□ -0.1
SNX4-201ENST00000251775 C1QTNF4Q9BXJ3 329 aa14.4□□□□□ -0.1
SNX4-201ENST00000251775 EEF1AKMT3Q96AZ1 226 aa14.4□□□□□ -0.1
SNX4-201ENST00000251775 KLK15Q9H2R5 256 aa14.4□□□□□ -0.1
SNX4-201ENST00000251775 IGHV3-49A0A0A0MS15 119 aa14.39□□□□□ -0.11
SNX4-201ENST00000251775 SPANXN1Q5VSR9 72 aa14.39□□□□□ -0.11
SNX4-201ENST00000251775 NEXN-AS1Q8NBZ9 246 aa14.39□□□□□ -0.11
SNX4-201ENST00000251775 MRAP2Q96G30 205 aa14.39□□□□□ -0.11
SNX4-201ENST00000251775 CDIP1Q9H305 208 aa14.39□□□□□ -0.11
SNX4-201ENST00000251775 Q5PR19 223 aa14.39□□□□□ -0.11
SNX4-201ENST00000251775 SYT8Q8NBV8 401 aa14.39□□□□□ -0.11
SNX4-201ENST00000251775 TMEM78Q5T7P6 136 aa14.38□□□□□ -0.11
SNX4-201ENST00000251775 ATP6V0E2Q8NHE4 81 aa14.38□□□□□ -0.11
SNX4-201ENST00000251775 SCGB3A1Q96QR1 104 aa14.38□□□□□ -0.11
SNX4-201ENST00000251775 SLC50A1Q9BRV3 221 aa14.38□□□□□ -0.11
SNX4-201ENST00000251775 MRPL16Q9NX20 251 aaKnown RBP14.38□□□□□ -0.11
SNX4-201ENST00000251775 LINC00527Q9UJ94 153 aa14.38□□□□□ -0.11
SNX4-201ENST00000251775 NFE4Q86UQ8 179 aa14.38□□□□□ -0.11
SNX4-201ENST00000251775 TOMM6Q96B49 74 aa14.38□□□□□ -0.11
SNX4-201ENST00000251775 TRBV7-1A0A0A6YYK4 115 aa14.37□□□□□ -0.11
SNX4-201ENST00000251775 TRAV8-2A0A0B4J237 113 aa14.37□□□□□ -0.11
SNX4-201ENST00000251775 BRD3OSQ6XYD6 125 aa14.37□□□□□ -0.11
SNX4-201ENST00000251775 DLX4Q92988 240 aaPredicted RBP14.37□□□□□ -0.11
SNX4-201ENST00000251775 C8orf86Q6ZUL3 223 aa14.37□□□□□ -0.11
SNX4-201ENST00000251775 PRADC1Q9BSG0 188 aa14.37□□□□□ -0.11
SNX4-201ENST00000251775 IGHV4-61A0A0C4DH41 118 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 252.2 ms