RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 LYPD6BQ8NI32 183 aa14.46□□□□□ -0.09
NEDD8-201ENST00000250495 CRYBA4P53673 196 aa14.45□□□□□ -0.1
NEDD8-201ENST00000250495 MRPL23Q16540 153 aaKnown RBP14.45□□□□□ -0.1
NEDD8-201ENST00000250495 Q8TAT8 98 aa14.45□□□□□ -0.1
NEDD8-201ENST00000250495 NXPH4O95158 308 aa14.44□□□□□ -0.1
NEDD8-201ENST00000250495 IFNA5P01569 189 aa14.44□□□□□ -0.1
NEDD8-201ENST00000250495 LINC00315P59091 139 aa14.44□□□□□ -0.1
NEDD8-201ENST00000250495 TAS2R45P59539 299 aa14.44□□□□□ -0.1
NEDD8-201ENST00000250495 UBE2L3P68036 154 aaKnown RBP14.44□□□□□ -0.1
NEDD8-201ENST00000250495 FHL2Q14192 279 aa14.44□□□□□ -0.1
NEDD8-201ENST00000250495 FFAR4Q5NUL3 377 aa14.44□□□□□ -0.1
NEDD8-201ENST00000250495 HSD17B11Q8NBQ5 300 aa14.44□□□□□ -0.1
NEDD8-201ENST00000250495 SCGB1C1Q8TD33 95 aa14.44□□□□□ -0.1
NEDD8-201ENST00000250495 LENEPQ9Y5L5 61 aa14.44□□□□□ -0.1
NEDD8-201ENST00000250495 ABCA13Q86UQ4 5058 aa14.44□□□□□ -0.1
NEDD8-201ENST00000250495 ATP6V0CP27449 155 aa14.43□□□□□ -0.1
NEDD8-201ENST00000250495 KRTAP10-2P60368 255 aa14.43□□□□□ -0.1
NEDD8-201ENST00000250495 KHDC3LQ587J8 217 aa14.43□□□□□ -0.1
NEDD8-201ENST00000250495 MUC21Q5SSG8 566 aa14.43□□□□□ -0.1
NEDD8-201ENST00000250495 DPPA3Q6W0C5 159 aa14.43□□□□□ -0.1
NEDD8-201ENST00000250495 C8orf49Q96NF6 230 aa14.43□□□□□ -0.1
NEDD8-201ENST00000250495 TRGV4A0A0C4DH28 118 aa14.42□□□□□ -0.1
NEDD8-201ENST00000250495 DIRC3C9JPN6 131 aa14.42□□□□□ -0.1
NEDD8-201ENST00000250495 LYPD5Q6UWN5 251 aa14.42□□□□□ -0.1
NEDD8-201ENST00000250495 FAM159AQ6UWV7 190 aa14.42□□□□□ -0.1
NEDD8-201ENST00000250495 SPXQ9BT56 116 aa14.42□□□□□ -0.1
NEDD8-201ENST00000250495 PSMG3Q9BT73 122 aaPredicted RBP14.42□□□□□ -0.1
NEDD8-201ENST00000250495 Q6AWC8 147 aa14.41□□□□□ -0.1
NEDD8-201ENST00000250495 NEGR1Q7Z3B1 354 aa14.41□□□□□ -0.1
NEDD8-201ENST00000250495 IQCF2Q8IXL9 164 aa14.41□□□□□ -0.1
NEDD8-201ENST00000250495 SH3BGRL3Q9H299 93 aa14.41□□□□□ -0.1
NEDD8-201ENST00000250495 MDFICQ9P1T7 246 aa14.41□□□□□ -0.1
NEDD8-201ENST00000250495 TRGV11A0A075B6L2 103 aa14.4□□□□□ -0.1
NEDD8-201ENST00000250495 TRAV9-2A0A087WT02 112 aa14.4□□□□□ -0.1
NEDD8-201ENST00000250495 Q6ZRN7 208 aaPredicted RBP14.4□□□□□ -0.1
NEDD8-201ENST00000250495 Q8N1X5 172 aa14.4□□□□□ -0.1
NEDD8-201ENST00000250495 OR2G3Q8NGZ4 309 aa14.4□□□□□ -0.1
NEDD8-201ENST00000250495 RASL10AQ92737 203 aa14.4□□□□□ -0.1
NEDD8-201ENST00000250495 EREGO14944 169 aa14.39□□□□□ -0.11
NEDD8-201ENST00000250495 TMEM183BQ1AE95 376 aa14.39□□□□□ -0.11
NEDD8-201ENST00000250495 NFE4Q86UQ8 179 aa14.39□□□□□ -0.11
NEDD8-201ENST00000250495 TMEM183AQ8IXX5 376 aa14.39□□□□□ -0.11
NEDD8-201ENST00000250495 OR10G4Q8NGN3 311 aa14.39□□□□□ -0.11
NEDD8-201ENST00000250495 CMTM2Q8TAZ6 248 aa14.39□□□□□ -0.11
NEDD8-201ENST00000250495 OTORQ9NRC9 128 aa14.39□□□□□ -0.11
NEDD8-201ENST00000250495 PGPA6NDG6 321 aa14.38□□□□□ -0.11
NEDD8-201ENST00000250495 ZNF479Q96JC4 524 aa14.38□□□□□ -0.11
NEDD8-201ENST00000250495 PGPEP1Q9NXJ5 209 aa14.38□□□□□ -0.11
NEDD8-201ENST00000250495 DNAH5Q8TE73 4624 aa14.38□□□□□ -0.11
NEDD8-201ENST00000250495 ORM1P02763 201 aa14.37□□□□□ -0.11
NEDD8-201ENST00000250495 SRIP30626 198 aa14.37□□□□□ -0.11
NEDD8-201ENST00000250495 SERF2P84101 59 aa14.37□□□□□ -0.11
NEDD8-201ENST00000250495 ACOT6Q3I5F7 207 aaPredicted RBP14.37□□□□□ -0.11
NEDD8-201ENST00000250495 AKR1C8PQ5T2L2 129 aa14.37□□□□□ -0.11
NEDD8-201ENST00000250495 ARL6IP6Q8N6S5 226 aa14.37□□□□□ -0.11
NEDD8-201ENST00000250495 SCRT2Q9NQ03 307 aa14.37□□□□□ -0.11
NEDD8-201ENST00000250495 A0A1W2PPV4 95 aa14.36□□□□□ -0.11
NEDD8-201ENST00000250495 TMEM218A2RU14 115 aa14.36□□□□□ -0.11
NEDD8-201ENST00000250495 K7EQD1 137 aa14.36□□□□□ -0.11
NEDD8-201ENST00000250495 SFTA3P0C7M3 94 aa14.36□□□□□ -0.11
NEDD8-201ENST00000250495 TDRG1Q3Y452 100 aa14.36□□□□□ -0.11
NEDD8-201ENST00000250495 PQLC2Q6ZP29 291 aa14.36□□□□□ -0.11
NEDD8-201ENST00000250495 LY96Q9Y6Y9 160 aa14.36□□□□□ -0.11
NEDD8-201ENST00000250495 K7EP13 123 aa14.35□□□□□ -0.11
NEDD8-201ENST00000250495 ERVFC1-1P60608 527 aa14.35□□□□□ -0.11
NEDD8-201ENST00000250495 C10orf91Q5T1B1 145 aa14.35□□□□□ -0.11
NEDD8-201ENST00000250495 FAM213BQ8TBF2 198 aa14.35□□□□□ -0.11
NEDD8-201ENST00000250495 SMDT1Q9H4I9 107 aa14.35□□□□□ -0.11
NEDD8-201ENST00000250495 NAGKQ9UJ70 344 aa14.35□□□□□ -0.11
NEDD8-201ENST00000250495 RPH3ALQ9UNE2 315 aa14.35□□□□□ -0.11
NEDD8-201ENST00000250495 TRAV21A0A0B4J279 112 aa14.34□□□□□ -0.11
NEDD8-201ENST00000250495 GYPEP15421 78 aa14.34□□□□□ -0.11
NEDD8-201ENST00000250495 TXNDC17Q9BRA2 123 aa14.34□□□□□ -0.11
NEDD8-201ENST00000250495 CARHSP1Q9Y2V2 147 aaKnown RBP14.34□□□□□ -0.11
NEDD8-201ENST00000250495 TNFRSF18Q9Y5U5 241 aa14.34□□□□□ -0.11
NEDD8-201ENST00000250495 APOBP04114 4563 aaKnown RBP14.33□□□□□ -0.11
NEDD8-201ENST00000250495 TRAV1-1A0A0B4J248 108 aa14.33□□□□□ -0.12
NEDD8-201ENST00000250495 TRAV4A0A0B4J268 109 aa14.33□□□□□ -0.12
NEDD8-201ENST00000250495 M0R2P5 195 aa14.33□□□□□ -0.12
NEDD8-201ENST00000250495 GNRH2O43555 120 aa14.33□□□□□ -0.12
NEDD8-201ENST00000250495 EIF3GO75821 320 aaKnown RBP eCLIP14.33□□□□□ -0.121e-7■■■■□ 19.4
NEDD8-201ENST00000250495 GOLT1AQ6ZVE7 132 aa14.33□□□□□ -0.12
NEDD8-201ENST00000250495 OR4C5Q8NGB2 326 aa14.33□□□□□ -0.12
NEDD8-201ENST00000250495 C9JCJ5 164 aa14.32□□□□□ -0.12
NEDD8-201ENST00000250495 EVI2AP22794 236 aa14.32□□□□□ -0.12
NEDD8-201ENST00000250495 RAB2AP61019 212 aa14.32□□□□□ -0.12
NEDD8-201ENST00000250495 CDPF1Q6NVV7 123 aa14.32□□□□□ -0.12
NEDD8-201ENST00000250495 SEC11CQ9BY50 192 aa14.32□□□□□ -0.12
NEDD8-201ENST00000250495 TREM1Q9NP99 234 aa14.32□□□□□ -0.12
NEDD8-201ENST00000250495 H2AFB1P0C5Y9 115 aa14.31□□□□□ -0.12
NEDD8-201ENST00000250495 FHITP49789 147 aa14.31□□□□□ -0.12
NEDD8-201ENST00000250495 PEA15Q15121 130 aa14.31□□□□□ -0.12
NEDD8-201ENST00000250495 KCNS1Q96KK3 526 aa14.31□□□□□ -0.12
NEDD8-201ENST00000250495 IGHV3-16A0A0C4DH30 117 aa14.3□□□□□ -0.12
NEDD8-201ENST00000250495 MBP02144 154 aa14.3□□□□□ -0.12
NEDD8-201ENST00000250495 SH2D6Q7Z4S9 175 aa14.3□□□□□ -0.12
NEDD8-201ENST00000250495 SVBPQ8N300 66 aa14.3□□□□□ -0.12
NEDD8-201ENST00000250495 OR10G9Q8NGN4 311 aa14.3□□□□□ -0.12
NEDD8-201ENST00000250495 OR10G7Q8NGN6 311 aa14.3□□□□□ -0.12
NEDD8-201ENST00000250495 SDF2L1Q9HCN8 221 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 127 ms