RNA–Protein interactions for RNA: ENST00000248594.10

PTPN12-201, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN12, Length 3,406 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-201ENST00000248594 TMEM200BQ69YZ2 307 aa14.23□□□□□ -0.13
PTPN12-201ENST00000248594 TEX49A0A1B0GTD5 131 aa14.22□□□□□ -0.13
PTPN12-201ENST00000248594 RNF182Q8N6D2 247 aa14.22□□□□□ -0.13
PTPN12-201ENST00000248594 M0R381 172 aa14.22□□□□□ -0.13
PTPN12-201ENST00000248594 TMEM170BQ5T4T1 132 aa14.22□□□□□ -0.13
PTPN12-201ENST00000248594 CELSR1Q9NYQ6 3014 aa14.22□□□□□ -0.13
PTPN12-201ENST00000248594 RHODO00212 210 aa14.22□□□□□ -0.13
PTPN12-201ENST00000248594 DOPEY2Q9Y3R5 2298 aa14.21□□□□□ -0.13
PTPN12-201ENST00000248594 TRAV8-4A0A0B4J246 113 aa14.21□□□□□ -0.14
PTPN12-201ENST00000248594 SHISA9B4DS77 424 aa14.2□□□□□ -0.14
PTPN12-201ENST00000248594 TNFRSF13BO14836 293 aaPredicted RBP14.2□□□□□ -0.14
PTPN12-201ENST00000248594 Q6ZS46 218 aa14.2□□□□□ -0.14
PTPN12-201ENST00000248594 IGF2RP11717 2491 aa14.2□□□□□ -0.14
PTPN12-201ENST00000248594 TCF15Q12870 199 aa14.2□□□□□ -0.14
PTPN12-201ENST00000248594 ZNF56Q15929 161 aa14.2□□□□□ -0.14
PTPN12-201ENST00000248594 NDUFA11Q86Y39 141 aa14.19□□□□□ -0.14
PTPN12-201ENST00000248594 FDCSPQ8NFU4 85 aa14.19□□□□□ -0.14
PTPN12-201ENST00000248594 TRAV2A0A0B4J234 112 aa14.19□□□□□ -0.14
PTPN12-201ENST00000248594 LYPD2Q6UXB3 125 aa14.19□□□□□ -0.14
PTPN12-201ENST00000248594 ZNF491Q8N8L2 437 aa14.19□□□□□ -0.14
PTPN12-201ENST00000248594 OTOGLQ3ZCN5 2332 aa14.19□□□□□ -0.14
PTPN12-201ENST00000248594 PSMG4Q5JS54 123 aa14.19□□□□□ -0.14
PTPN12-201ENST00000248594 IL17RELQ6ZVW7 336 aa14.19□□□□□ -0.14
PTPN12-201ENST00000248594 GATD1Q8NB37 220 aa14.19□□□□□ -0.14
PTPN12-201ENST00000248594 PIFOQ8TCI5 191 aa14.19□□□□□ -0.14
PTPN12-201ENST00000248594 CFHR4Q92496 578 aa14.19□□□□□ -0.14
PTPN12-201ENST00000248594 TMEM14CQ9P0S9 112 aa14.19□□□□□ -0.14
PTPN12-201ENST00000248594 PRAC2D3DTV9 90 aa14.18□□□□□ -0.14
PTPN12-201ENST00000248594 HES1Q14469 280 aa14.18□□□□□ -0.14
PTPN12-201ENST00000248594 IGHV1-46P01743 117 aa14.18□□□□□ -0.14
PTPN12-201ENST00000248594 SPXQ9BT56 116 aa14.18□□□□□ -0.14
PTPN12-201ENST00000248594 Q8N1Y9 231 aa14.18□□□□□ -0.14
PTPN12-201ENST00000248594 H3BRN7 92 aa14.17□□□□□ -0.14
PTPN12-201ENST00000248594 SIGLEC9Q9Y336 463 aa14.17□□□□□ -0.14
PTPN12-201ENST00000248594 C22orf34Q6ZV56 151 aa14.17□□□□□ -0.14
PTPN12-201ENST00000248594 RAB1BQ9H0U4 201 aa14.16□□□□□ -0.14
PTPN12-201ENST00000248594 RPL39LQ96EH5 51 aaKnown RBP14.16□□□□□ -0.14
PTPN12-201ENST00000248594 HOXB4P17483 251 aaPredicted RBP14.16□□□□□ -0.14
PTPN12-201ENST00000248594 HERVK_113P61574 105 aa14.16□□□□□ -0.14
PTPN12-201ENST00000248594 NPC2P61916 151 aa14.16□□□□□ -0.14
PTPN12-201ENST00000248594 FCN3O75636 299 aa14.15□□□□□ -0.14
PTPN12-201ENST00000248594 LHBP01229 141 aa14.15□□□□□ -0.14
PTPN12-201ENST00000248594 CFC1BP0CG36 223 aa14.15□□□□□ -0.14
PTPN12-201ENST00000248594 CFC1P0CG37 223 aa14.15□□□□□ -0.14
PTPN12-201ENST00000248594 DYNAPQ8N1N2 210 aa14.15□□□□□ -0.14
PTPN12-201ENST00000248594 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.15□□□□□ -0.142e-8■■■■□ 24.3
PTPN12-201ENST00000248594 NDUFB3O43676 98 aa14.15□□□□□ -0.14
PTPN12-201ENST00000248594 IGLC6P0CF74 106 aa14.15□□□□□ -0.14
PTPN12-201ENST00000248594 PRSS2P07478 247 aa14.15□□□□□ -0.14
PTPN12-201ENST00000248594 FOXC1Q12948 553 aa14.15□□□□□ -0.14
PTPN12-201ENST00000248594 VCX2Q9H322 139 aa14.15□□□□□ -0.14
PTPN12-201ENST00000248594 LOC107984640A0A0U1RRK4 108 aa14.14□□□□□ -0.15
PTPN12-201ENST00000248594 A4D1N5 150 aa14.14□□□□□ -0.15
PTPN12-201ENST00000248594 K7EM74 188 aa14.14□□□□□ -0.15
PTPN12-201ENST00000248594 DUX3Q96PT4 197 aa14.14□□□□□ -0.15
PTPN12-201ENST00000248594 PRO1854Q9UHT4 67 aa14.14□□□□□ -0.15
PTPN12-201ENST00000248594 TM4SF5O14894 197 aa14.13□□□□□ -0.15
PTPN12-201ENST00000248594 S100A4P26447 101 aaKnown RBP14.13□□□□□ -0.15
PTPN12-201ENST00000248594 FAM27E3Q08E93 113 aa14.13□□□□□ -0.15
PTPN12-201ENST00000248594 DEFB109BQ30KR1 87 aa14.13□□□□□ -0.15
PTPN12-201ENST00000248594 C2orf66Q6UXQ4 117 aa14.13□□□□□ -0.15
PTPN12-201ENST00000248594 VPREB3Q9UKI3 123 aa14.13□□□□□ -0.15
PTPN12-201ENST00000248594 DLX6P56179 175 aa14.13□□□□□ -0.15
PTPN12-201ENST00000248594 UBE2D3P61077 147 aa14.13□□□□□ -0.15
PTPN12-201ENST00000248594 UBE2D2P62837 147 aa14.13□□□□□ -0.15
PTPN12-201ENST00000248594 FAM57AQ8TBR7 257 aa14.13□□□□□ -0.15
PTPN12-201ENST00000248594 NCOR2Q9Y618 2525 aa14.13□□□□□ -0.15
PTPN12-201ENST00000248594 I3L2K1 104 aa14.12□□□□□ -0.15
PTPN12-201ENST00000248594 SRD5A1P18405 259 aa14.12□□□□□ -0.15
PTPN12-201ENST00000248594 C10orf126Q8N4M7 172 aa14.12□□□□□ -0.15
PTPN12-201ENST00000248594 C14orf178Q8N769 122 aaPredicted RBP14.12□□□□□ -0.15
PTPN12-201ENST00000248594 RASL10AQ92737 203 aa14.12□□□□□ -0.15
PTPN12-201ENST00000248594 UBE2D1P51668 147 aa14.12□□□□□ -0.15
PTPN12-201ENST00000248594 ANKHD1Q8IWZ3 2542 aaKnown RBP14.12□□□□□ -0.15
PTPN12-201ENST00000248594 ADARB2-AS1A8MUL3 147 aa14.11□□□□□ -0.15
PTPN12-201ENST00000248594 GFRALQ6UXV0 394 aa14.11□□□□□ -0.15
PTPN12-201ENST00000248594 ELANEP08246 267 aa14.11□□□□□ -0.15
PTPN12-201ENST00000248594 TEX22C9J3V5 150 aa14.11□□□□□ -0.15
PTPN12-201ENST00000248594 K7EIM0 57 aa14.11□□□□□ -0.15
PTPN12-201ENST00000248594 CD7P09564 240 aa14.11□□□□□ -0.15
PTPN12-201ENST00000248594 C11orf86A6NJI1 115 aa14.1□□□□□ -0.15
PTPN12-201ENST00000248594 GLRXP35754 106 aa14.1□□□□□ -0.15
PTPN12-201ENST00000248594 MRGPRG-AS1Q2M3A8 158 aa14.1□□□□□ -0.15
PTPN12-201ENST00000248594 PRSS33Q8NF86 280 aa14.1□□□□□ -0.15
PTPN12-201ENST00000248594 C11orf21Q9P2W6 132 aa14.1□□□□□ -0.15
PTPN12-201ENST00000248594 KLK5Q9Y337 293 aaPredicted RBP14.1□□□□□ -0.15
PTPN12-201ENST00000248594 LYPD1Q8N2G4 141 aa14.1□□□□□ -0.15
PTPN12-201ENST00000248594 SMIM2Q9BVW6 85 aa14.1□□□□□ -0.15
PTPN12-201ENST00000248594 UBTD1Q9HAC8 227 aa14.1□□□□□ -0.15
PTPN12-201ENST00000248594 CHD8Q9HCK8 2581 aa14.1□□□□□ -0.15
PTPN12-201ENST00000248594 DUSP14O95147 198 aaKnown RBP14.09□□□□□ -0.15
PTPN12-201ENST00000248594 ADIPOQQ15848 244 aa14.09□□□□□ -0.15
PTPN12-201ENST00000248594 BAALCQ8WXS3 180 aa14.09□□□□□ -0.15
PTPN12-201ENST00000248594 IGLV2-18A0A075B6J9 118 aa14.09□□□□□ -0.15
PTPN12-201ENST00000248594 IGKV3D-20A0A0C4DH25 116 aa14.09□□□□□ -0.15
PTPN12-201ENST00000248594 MRPS12O15235 138 aaKnown RBP14.09□□□□□ -0.15
PTPN12-201ENST00000248594 C2orf82Q6UX34 121 aa14.09□□□□□ -0.15
PTPN12-201ENST00000248594 RAI1Q7Z5J4 1906 aaPredicted RBP14.09□□□□□ -0.15
PTPN12-201ENST00000248594 IGKV3-7A0A075B6H7 116 aa14.09□□□□□ -0.15
PTPN12-201ENST00000248594 INS-IGF2F8WCM5 200 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms