RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 PIMREGQ9BSJ6 248 aa9.68□□□□□ -0.86
RAB3IP-201ENST00000247833 NHP2Q9NX24 153 aaKnown RBP9.68□□□□□ -0.86
RAB3IP-201ENST00000247833 MRPL35Q9NZE8 188 aaKnown RBP9.68□□□□□ -0.86
RAB3IP-201ENST00000247833 A0A0G2JLM5 398 aa9.68□□□□□ -0.86
RAB3IP-201ENST00000247833 IGHV4-38-2P0DP08 117 aa9.68□□□□□ -0.86
RAB3IP-201ENST00000247833 RPL24P83731 157 aaKnown RBP9.68□□□□□ -0.86
RAB3IP-201ENST00000247833 CST9LQ9H4G1 147 aa9.68□□□□□ -0.86
RAB3IP-201ENST00000247833 IGHV4-61A0A0C4DH41 118 aa9.67□□□□□ -0.86
RAB3IP-201ENST00000247833 CLPSL1A2RUU4 121 aa9.67□□□□□ -0.86
RAB3IP-201ENST00000247833 OVOL3O00110 214 aa9.67□□□□□ -0.86
RAB3IP-201ENST00000247833 IGHV4-39P01824 125 aa9.67□□□□□ -0.86
RAB3IP-201ENST00000247833 HTN1P15515 57 aa9.67□□□□□ -0.86
RAB3IP-201ENST00000247833 BLCAPP62952 87 aa9.67□□□□□ -0.86
RAB3IP-201ENST00000247833 LAGE3Q14657 143 aa9.67□□□□□ -0.86
RAB3IP-201ENST00000247833 LINC01559Q495D7 138 aa9.67□□□□□ -0.86
RAB3IP-201ENST00000247833 NAV2Q8IVL1 2488 aa9.67□□□□□ -0.86
RAB3IP-201ENST00000247833 OR1N2Q8NGR9 330 aa9.67□□□□□ -0.86
RAB3IP-201ENST00000247833 FAM74A4Q5TZK3 123 aa9.67□□□□□ -0.86
RAB3IP-201ENST00000247833 OR9G4Q8NGQ1 327 aa9.67□□□□□ -0.86
RAB3IP-201ENST00000247833 U3KQK5 164 aa9.67□□□□□ -0.86
RAB3IP-201ENST00000247833 ATP5LO75964 103 aa9.67□□□□□ -0.86
RAB3IP-201ENST00000247833 ASIPP42127 132 aa9.67□□□□□ -0.86
RAB3IP-201ENST00000247833 NEGR1Q7Z3B1 354 aa9.67□□□□□ -0.86
RAB3IP-201ENST00000247833 SCGB3A1Q96QR1 104 aa9.67□□□□□ -0.86
RAB3IP-201ENST00000247833 ABCA12Q86UK0 2595 aa9.66□□□□□ -0.86
RAB3IP-201ENST00000247833 K7ERJ3 54 aa9.66□□□□□ -0.86
RAB3IP-201ENST00000247833 OR4X2Q8NGF9 303 aa9.66□□□□□ -0.86
RAB3IP-201ENST00000247833 NPFFR1Q9GZQ6 430 aa9.66□□□□□ -0.86
RAB3IP-201ENST00000247833 SPCS1Q9Y6A9 102 aa9.66□□□□□ -0.86
RAB3IP-201ENST00000247833 IGKV2D-26A0A0A0MRZ7 120 aa9.66□□□□□ -0.86
RAB3IP-201ENST00000247833 TRAV8-2A0A0B4J237 113 aa9.66□□□□□ -0.86
RAB3IP-201ENST00000247833 IGHV1-69DA0A0B4J2H0 117 aa9.66□□□□□ -0.86
RAB3IP-201ENST00000247833 IGHV1-69P01742 117 aa9.66□□□□□ -0.86
RAB3IP-201ENST00000247833 TMEM95Q3KNT9 176 aa9.66□□□□□ -0.86
RAB3IP-201ENST00000247833 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.66□□□□□ -0.86
RAB3IP-201ENST00000247833 C9orf139Q6ZV77 190 aa9.66□□□□□ -0.86
RAB3IP-201ENST00000247833 BOD1L2Q8IYS8 172 aa9.66□□□□□ -0.86
RAB3IP-201ENST00000247833 Q8N8P6 123 aa9.66□□□□□ -0.86
RAB3IP-201ENST00000247833 K7ERU9 68 aa9.65□□□□□ -0.86
RAB3IP-201ENST00000247833 FABP2P12104 132 aa9.65□□□□□ -0.86
RAB3IP-201ENST00000247833 HIST1H4GQ99525 98 aa9.65□□□□□ -0.86
RAB3IP-201ENST00000247833 RHPN1-AS1Q9BWJ2 59 aa9.65□□□□□ -0.86
RAB3IP-201ENST00000247833 TRAV21A0A0B4J279 112 aa9.65□□□□□ -0.86
RAB3IP-201ENST00000247833 SMIM13P0DJ93 91 aa9.65□□□□□ -0.86
RAB3IP-201ENST00000247833 SRSF1Q07955 248 aaKnown RBP eCLIP9.65□□□□□ -0.86
RAB3IP-201ENST00000247833 ANXA2RQ3ZCQ2 193 aa9.65□□□□□ -0.86
RAB3IP-201ENST00000247833 GNRH2O43555 120 aa9.64□□□□□ -0.87
RAB3IP-201ENST00000247833 EMP1P54849 157 aa9.64□□□□□ -0.87
RAB3IP-201ENST00000247833 ODF1Q14990 250 aa9.64□□□□□ -0.87
RAB3IP-201ENST00000247833 PRR9Q5T870 116 aa9.64□□□□□ -0.87
RAB3IP-201ENST00000247833 GATD1Q8NB37 220 aa9.64□□□□□ -0.87
RAB3IP-201ENST00000247833 OCIAD2Q56VL3 154 aa9.64□□□□□ -0.87
RAB3IP-201ENST00000247833 MAPK1IP1LQ8NDC0 245 aa9.64□□□□□ -0.87
RAB3IP-201ENST00000247833 ITLN2Q8WWU7 325 aaPredicted RBP9.64□□□□□ -0.87
RAB3IP-201ENST00000247833 RPL39LQ96EH5 51 aaKnown RBP9.64□□□□□ -0.87
RAB3IP-201ENST00000247833 C20orf173Q96LM9 149 aa9.64□□□□□ -0.87
RAB3IP-201ENST00000247833 CHAC1Q9BUX1 264 aa9.64□□□□□ -0.87
RAB3IP-201ENST00000247833 SCGB1D4Q6XE38 83 aa9.63□□□□□ -0.87
RAB3IP-201ENST00000247833 RBAKDNA6NC62 111 aa9.63□□□□□ -0.87
RAB3IP-201ENST00000247833 DPF1Q92782 380 aa9.63□□□□□ -0.87
RAB3IP-201ENST00000247833 FGF6P10767 208 aa9.63□□□□□ -0.87
RAB3IP-201ENST00000247833 SFTA2Q6UW10 78 aa9.63□□□□□ -0.87
RAB3IP-201ENST00000247833 FAM159AQ6UWV7 190 aa9.63□□□□□ -0.87
RAB3IP-201ENST00000247833 NRGNQ92686 78 aa9.63□□□□□ -0.87
RAB3IP-201ENST00000247833 CELSR1Q9NYQ6 3014 aa9.62□□□□□ -0.87
RAB3IP-201ENST00000247833 OR11H12B2RN74 326 aa9.62□□□□□ -0.87
RAB3IP-201ENST00000247833 ZNF688P0C7X2 276 aa9.62□□□□□ -0.87
RAB3IP-201ENST00000247833 FXYD2P54710 66 aa9.62□□□□□ -0.87
RAB3IP-201ENST00000247833 OR11H1Q8NG94 326 aa9.62□□□□□ -0.87
RAB3IP-201ENST00000247833 OR11H2Q8NH07 326 aa9.62□□□□□ -0.87
RAB3IP-201ENST00000247833 MEGF9Q9H1U4 602 aa9.62□□□□□ -0.87
RAB3IP-201ENST00000247833 A0A087WWL8 130 aa9.62□□□□□ -0.87
RAB3IP-201ENST00000247833 C9orf118A6NHY6 69 aa9.62□□□□□ -0.87
RAB3IP-201ENST00000247833 FAM223BA6NKX1 122 aa9.62□□□□□ -0.87
RAB3IP-201ENST00000247833 RIPPLY3P57055 190 aa9.62□□□□□ -0.87
RAB3IP-201ENST00000247833 Q6ZS46 218 aa9.62□□□□□ -0.87
RAB3IP-201ENST00000247833 FAM223AQ8IWN6 122 aa9.62□□□□□ -0.87
RAB3IP-201ENST00000247833 NACAE9PAV3 2078 aa9.62□□□□□ -0.87
RAB3IP-201ENST00000247833 TRAV12-3A0A0B4J271 114 aa9.62□□□□□ -0.87
RAB3IP-201ENST00000247833 SAP30O75446 220 aa9.62□□□□□ -0.87
RAB3IP-201ENST00000247833 CD7P09564 240 aa9.62□□□□□ -0.87
RAB3IP-201ENST00000247833 ARL6IP6Q8N6S5 226 aa9.62□□□□□ -0.87
RAB3IP-201ENST00000247833 KHDC1LQ5JSQ8 128 aa9.61□□□□□ -0.87
RAB3IP-201ENST00000247833 SAMD5Q5TGI4 173 aa9.61□□□□□ -0.87
RAB3IP-201ENST00000247833 LINC00477Q96M19 166 aa9.61□□□□□ -0.87
RAB3IP-201ENST00000247833 DUX5Q96PT3 197 aa9.61□□□□□ -0.87
RAB3IP-201ENST00000247833 FLNCQ14315 2725 aa9.61□□□□□ -0.87
RAB3IP-201ENST00000247833 H3BRM9 83 aa9.61□□□□□ -0.87
RAB3IP-201ENST00000247833 RBX1P62877 108 aa9.61□□□□□ -0.87
RAB3IP-201ENST00000247833 SMIM2Q9BVW6 85 aa9.61□□□□□ -0.87
RAB3IP-201ENST00000247833 AGRNO00468 2067 aa9.61□□□□□ -0.87
RAB3IP-201ENST00000247833 IGHV4-30-2A0A087WSY4 118 aa9.61□□□□□ -0.87
RAB3IP-201ENST00000247833 OVOL1O14753 267 aa9.61□□□□□ -0.87
RAB3IP-201ENST00000247833 SUMO2P61956 95 aaKnown RBP9.61□□□□□ -0.87
RAB3IP-201ENST00000247833 C9orf47Q6ZRZ4 202 aa9.61□□□□□ -0.87
RAB3IP-201ENST00000247833 JMJD8Q96S16 334 aa9.61□□□□□ -0.87
RAB3IP-201ENST00000247833 TRBV25-1A0A075B6N4 114 aa9.6□□□□□ -0.87
RAB3IP-201ENST00000247833 IGHV7-4-1A0A0J9YVY3 117 aa9.6□□□□□ -0.87
RAB3IP-201ENST00000247833 DPH3P1Q9H4G8 78 aa9.6□□□□□ -0.87
RAB3IP-201ENST00000247833 CHTOPQ9Y3Y2 248 aaKnown RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms