RNA–Protein interactions for RNA: ENST00000244745.3

SOX4-201, Transcript of SRY-box 4, humanhuman

APPRIS P1 BASIC

Gene SOX4, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4-201ENST00000244745 PLA2G5P39877 138 aa15.57■□□□□ 0.08
SOX4-201ENST00000244745 RNASE13Q5GAN3 156 aaKnown RBP15.57■□□□□ 0.08
SOX4-201ENST00000244745 ANKRD29Q8N6D5 301 aa15.57■□□□□ 0.08
SOX4-201ENST00000244745 IGHV7-4-1A0A0J9YVY3 117 aa15.57■□□□□ 0.08
SOX4-201ENST00000244745 I3L2K1 104 aa15.57■□□□□ 0.08
SOX4-201ENST00000244745 SS18Q15532 418 aa15.57■□□□□ 0.08
SOX4-201ENST00000244745 BOD1L2Q8IYS8 172 aa15.57■□□□□ 0.08
SOX4-201ENST00000244745 SPANXDQ9BXN6 97 aa15.57■□□□□ 0.08
SOX4-201ENST00000244745 AGPAT4-IT1Q9H0P7 198 aa15.57■□□□□ 0.08
SOX4-201ENST00000244745 PRSS29PA6NIE9 313 aa15.57■□□□□ 0.08
SOX4-201ENST00000244745 WT1P19544 449 aaPredicted RBP15.57■□□□□ 0.08
SOX4-201ENST00000244745 RHODO00212 210 aa15.56■□□□□ 0.08
SOX4-201ENST00000244745 FXYD2P54710 66 aa15.56■□□□□ 0.08
SOX4-201ENST00000244745 WFDC2Q14508 124 aa15.56■□□□□ 0.08
SOX4-201ENST00000244745 CFC1BP0CG36 223 aa15.55■□□□□ 0.08
SOX4-201ENST00000244745 CFC1P0CG37 223 aa15.55■□□□□ 0.08
SOX4-201ENST00000244745 GTSF1Q8WW33 167 aa15.55■□□□□ 0.08
SOX4-201ENST00000244745 FAM167A-AS1Q96KT0 104 aa15.55■□□□□ 0.08
SOX4-201ENST00000244745 ZNRF2Q8NHG8 242 aa15.55■□□□□ 0.08
SOX4-201ENST00000244745 TCTEX1D4Q5JR98 221 aa15.54■□□□□ 0.08
SOX4-201ENST00000244745 IGHG4P01861 327 aa15.54■□□□□ 0.08
SOX4-201ENST00000244745 RBAKDNA6NC62 111 aa15.53■□□□□ 0.08
SOX4-201ENST00000244745 GRNP28799 593 aaKnown RBP15.53■□□□□ 0.08
SOX4-201ENST00000244745 TMEM126AQ9H061 195 aa15.53■□□□□ 0.08
SOX4-201ENST00000244745 ZNF318Q5VUA4 2279 aa15.53■□□□□ 0.08
SOX4-201ENST00000244745 K7EIM0 57 aa15.53■□□□□ 0.08
SOX4-201ENST00000244745 SPTA1P02549 2419 aa15.53■□□□□ 0.08
SOX4-201ENST00000244745 C2orf16Q68DN1 1984 aa15.52■□□□□ 0.08
SOX4-201ENST00000244745 PFN2P35080 140 aa15.52■□□□□ 0.08
SOX4-201ENST00000244745 GATA3P23771 443 aa15.52■□□□□ 0.07
SOX4-201ENST00000244745 CHD3Q12873 2000 aaKnown RBP15.52■□□□□ 0.07
SOX4-201ENST00000244745 ODF3L1Q8IXM7 274 aa15.51■□□□□ 0.07
SOX4-201ENST00000244745 MSRB1Q9NZV6 116 aa15.51■□□□□ 0.07
SOX4-201ENST00000244745 IGLV2-23P01705 113 aa15.51■□□□□ 0.07
SOX4-201ENST00000244745 IGKV1OR2-108A0A075B7D4 117 aa15.51■□□□□ 0.07
SOX4-201ENST00000244745 DKK4Q9UBT3 224 aa15.51■□□□□ 0.07
SOX4-201ENST00000244745 RPL39LQ96EH5 51 aaKnown RBP15.51■□□□□ 0.07
SOX4-201ENST00000244745 APC2O95996 2303 aa15.5■□□□□ 0.07
SOX4-201ENST00000244745 NPBQ8NG41 125 aa15.5■□□□□ 0.07
SOX4-201ENST00000244745 ALPK3Q96L96 1907 aa15.5■□□□□ 0.07
SOX4-201ENST00000244745 INS-IGF2F8WCM5 200 aa15.5■□□□□ 0.07
SOX4-201ENST00000244745 PIP4P1Q86T03 277 aa15.5■□□□□ 0.07
SOX4-201ENST00000244745 CRYBA4P53673 196 aa15.5■□□□□ 0.07
SOX4-201ENST00000244745 TTTY13Q9BZ97 58 aa15.5■□□□□ 0.07
SOX4-201ENST00000244745 E7EUB6 86 aa15.49■□□□□ 0.07
SOX4-201ENST00000244745 MRPL53Q96EL3 112 aaKnown RBP15.49■□□□□ 0.07
SOX4-201ENST00000244745 Q6ZPA2 131 aa15.49■□□□□ 0.07
SOX4-201ENST00000244745 RS1O15537 224 aa15.49■□□□□ 0.07
SOX4-201ENST00000244745 ZNF493Q6ZR52 646 aa15.49■□□□□ 0.07
SOX4-201ENST00000244745 SMIM20Q8N5G0 67 aa15.49■□□□□ 0.07
SOX4-201ENST00000244745 IGKV1-17P01599 117 aa15.49■□□□□ 0.07
SOX4-201ENST00000244745 CEP250Q9BV73 2442 aa15.48■□□□□ 0.07
SOX4-201ENST00000244745 IGFL2Q6UWQ7 119 aa15.48■□□□□ 0.07
SOX4-201ENST00000244745 NCKAP5O14513 1909 aa15.48■□□□□ 0.07
SOX4-201ENST00000244745 UBL5Q9BZL1 73 aa15.47■□□□□ 0.07
SOX4-201ENST00000244745 IGLV11-55A0A075B6I3 123 aa15.47■□□□□ 0.07
SOX4-201ENST00000244745 TMEM243Q9BU79 118 aa15.47■□□□□ 0.07
SOX4-201ENST00000244745 HIGD1BQ9P298 99 aa15.47■□□□□ 0.07
SOX4-201ENST00000244745 DOCK7Q96N67 2140 aa15.47■□□□□ 0.07
SOX4-201ENST00000244745 CRIP3Q6Q6R5 217 aa15.46■□□□□ 0.07
SOX4-201ENST00000244745 MRPL36Q9P0J6 103 aaKnown RBP15.46■□□□□ 0.07
SOX4-201ENST00000244745 FOXI1Q12951 378 aa15.46■□□□□ 0.07
SOX4-201ENST00000244745 TMEM131Q92545 1883 aa15.46■□□□□ 0.07
SOX4-201ENST00000244745 IGHV7-81A0A0B4J1V7 117 aa15.46■□□□□ 0.07
SOX4-201ENST00000244745 MRAPQ8TCY5 172 aa15.46■□□□□ 0.07
SOX4-201ENST00000244745 SP5Q6BEB4 398 aaPredicted RBP15.45■□□□□ 0.06
SOX4-201ENST00000244745 YPEL4Q96NS1 127 aa15.45■□□□□ 0.06
SOX4-201ENST00000244745 TINCRA0A1B0GVN0 87 aa15.45■□□□□ 0.06
SOX4-201ENST00000244745 TRAV13-2A0A0B4J235 113 aa15.45■□□□□ 0.06
SOX4-201ENST00000244745 TEX22C9J3V5 150 aa15.45■□□□□ 0.06
SOX4-201ENST00000244745 WI2-2373I1.2A0A1W2PRP0 233 aa15.44■□□□□ 0.06
SOX4-201ENST00000244745 SUMO4Q6EEV6 95 aa15.44■□□□□ 0.06
SOX4-201ENST00000244745 TEN1Q86WV5 123 aa15.44■□□□□ 0.06
SOX4-201ENST00000244745 LTBP2Q14767 1821 aa15.44■□□□□ 0.06
SOX4-201ENST00000244745 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.44■□□□□ 0.06
SOX4-201ENST00000244745 IGKV2-29A2NJV5 120 aaPredicted RBP15.44■□□□□ 0.06
SOX4-201ENST00000244745 CTSGP08311 255 aa15.43■□□□□ 0.06
SOX4-201ENST00000244745 HAMPP81172 84 aa15.43■□□□□ 0.06
SOX4-201ENST00000244745 UBE2DNLQ8IWF7 75 aa15.43■□□□□ 0.06
SOX4-201ENST00000244745 H3BUA1 57 aa15.43■□□□□ 0.06
SOX4-201ENST00000244745 SRSF2Q01130 221 aaKnown RBP15.43■□□□□ 0.06
SOX4-201ENST00000244745 TRAV12-1A0A0B4J245 112 aa15.43■□□□□ 0.06
SOX4-201ENST00000244745 Q96MF0 132 aa15.43■□□□□ 0.06
SOX4-201ENST00000244745 POLEQ07864 2286 aa15.43■□□□□ 0.06
SOX4-201ENST00000244745 PRAC2D3DTV9 90 aa15.43■□□□□ 0.06
SOX4-201ENST00000244745 HERVK_113P63121 156 aa15.42■□□□□ 0.06
SOX4-201ENST00000244745 CR1LQ2VPA4 569 aa15.42■□□□□ 0.06
SOX4-201ENST00000244745 SPATA12Q7Z6I5 190 aa15.42■□□□□ 0.06
SOX4-201ENST00000244745 CENPVL3A0A0U1RRI6 287 aa15.42■□□□□ 0.06
SOX4-201ENST00000244745 C2orf70A6NJV1 201 aa15.42■□□□□ 0.06
SOX4-201ENST00000244745 BAALC-AS2P0C853 105 aa15.42■□□□□ 0.06
SOX4-201ENST00000244745 NXPH4O95158 308 aa15.42■□□□□ 0.06
SOX4-201ENST00000244745 RHOHQ15669 191 aa15.42■□□□□ 0.06
SOX4-201ENST00000244745 ZNF503Q96F45 646 aa15.42■□□□□ 0.06
SOX4-201ENST00000244745 ZNF295-AS1Q8N0V1 137 aa15.42■□□□□ 0.06
SOX4-201ENST00000244745 EML6Q6ZMW3 1958 aa15.42■□□□□ 0.06
SOX4-201ENST00000244745 A0A1W2PNU3 283 aaPredicted RBP15.42■□□□□ 0.06
SOX4-201ENST00000244745 MUSTN1Q8IVN3 82 aa15.42■□□□□ 0.06
SOX4-201ENST00000244745 P0C879 139 aa15.41■□□□□ 0.06
SOX4-201ENST00000244745 TRAV26-1A0A087WT03 109 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms