RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 DEFB136Q30KP8 78 aa17.46■□□□□ 0.39
MSX2-201ENST00000239243 C18orf65Q6ZTR6 163 aa17.46■□□□□ 0.39
MSX2-201ENST00000239243 FA2HQ7L5A8 372 aa17.46■□□□□ 0.39
MSX2-201ENST00000239243 OR1N2Q8NGR9 330 aa17.46■□□□□ 0.39
MSX2-201ENST00000239243 TLN2Q9Y4G6 2542 aa17.46■□□□□ 0.39
MSX2-201ENST00000239243 DDTP30046 118 aa17.45■□□□□ 0.38
MSX2-201ENST00000239243 ESM1Q9NQ30 184 aa17.45■□□□□ 0.38
MSX2-201ENST00000239243 ZNF469Q96JG9 3925 aaPredicted RBP17.45■□□□□ 0.38
MSX2-201ENST00000239243 KLLNB2CW77 178 aa17.45■□□□□ 0.38
MSX2-201ENST00000239243 SPANXN1Q5VSR9 72 aa17.45■□□□□ 0.38
MSX2-201ENST00000239243 Q6ZQT7 251 aa17.45■□□□□ 0.38
MSX2-201ENST00000239243 OR10AG1Q8NH19 301 aa17.45■□□□□ 0.38
MSX2-201ENST00000239243 LAMTOR2Q9Y2Q5 125 aa17.45■□□□□ 0.38
MSX2-201ENST00000239243 MED14OSP0DP75 135 aa17.44■□□□□ 0.38
MSX2-201ENST00000239243 BTF3P20290 206 aaKnown RBP17.44■□□□□ 0.38
MSX2-201ENST00000239243 EBLN2Q6P2I7 272 aa17.44■□□□□ 0.38
MSX2-201ENST00000239243 Q8N976 141 aa17.44■□□□□ 0.38
MSX2-201ENST00000239243 KLHL30-AS1Q8NEE0 82 aa17.44■□□□□ 0.38
MSX2-201ENST00000239243 LEPROTL1O95214 131 aa17.44■□□□□ 0.38
MSX2-201ENST00000239243 LEPP41159 167 aa17.44■□□□□ 0.38
MSX2-201ENST00000239243 ASIPP42127 132 aa17.44■□□□□ 0.38
MSX2-201ENST00000239243 RNF185Q96GF1 192 aa17.44■□□□□ 0.38
MSX2-201ENST00000239243 TMEM160Q9NX00 188 aa17.44■□□□□ 0.38
MSX2-201ENST00000239243 H3BVH4 76 aa17.43■□□□□ 0.38
MSX2-201ENST00000239243 OR9G4Q8NGQ1 327 aa17.43■□□□□ 0.38
MSX2-201ENST00000239243 UNC79Q9P2D8 2635 aa17.43■□□□□ 0.38
MSX2-201ENST00000239243 KIR2DL5BA0A0G2JN68 375 aa17.43■□□□□ 0.38
MSX2-201ENST00000239243 KIR2DL5BA0A0G2JPC4 375 aa17.43■□□□□ 0.38
MSX2-201ENST00000239243 A0A0J9YX75 114 aa17.43■□□□□ 0.38
MSX2-201ENST00000239243 RNASE1P07998 156 aaKnown RBP17.43■□□□□ 0.38
MSX2-201ENST00000239243 S100A4P26447 101 aaKnown RBP17.43■□□□□ 0.38
MSX2-201ENST00000239243 KIR2DL5AQ8N109 375 aa17.43■□□□□ 0.38
MSX2-201ENST00000239243 VAMP8Q9BV40 100 aa17.43■□□□□ 0.38
MSX2-201ENST00000239243 PMCHL1Q16048 86 aa17.42■□□□□ 0.38
MSX2-201ENST00000239243 ANXA2RQ3ZCQ2 193 aa17.42■□□□□ 0.38
MSX2-201ENST00000239243 DUSP14O95147 198 aaKnown RBP17.41■□□□□ 0.38
MSX2-201ENST00000239243 TRAV2A0A0B4J234 112 aa17.41■□□□□ 0.38
MSX2-201ENST00000239243 DEFA6Q01524 100 aa17.41■□□□□ 0.38
MSX2-201ENST00000239243 ADAMTSL5Q6ZMM2 481 aa17.41■□□□□ 0.38
MSX2-201ENST00000239243 TMEM70Q9BUB7 260 aa17.41■□□□□ 0.38
MSX2-201ENST00000239243 SIGLEC8Q9NYZ4 499 aa17.41■□□□□ 0.38
MSX2-201ENST00000239243 TCF21O43680 179 aa17.4■□□□□ 0.38
MSX2-201ENST00000239243 HSPB8Q9UJY1 196 aa17.4■□□□□ 0.38
MSX2-201ENST00000239243 IFI27P40305 119 aaPredicted RBP17.4■□□□□ 0.38
MSX2-201ENST00000239243 ZNF418Q8TF45 676 aaPredicted RBP17.4■□□□□ 0.38
MSX2-201ENST00000239243 MYO9AB2RTY4 2548 aa17.4■□□□□ 0.38
MSX2-201ENST00000239243 FOXI2Q6ZQN5 318 aa17.39■□□□□ 0.37
MSX2-201ENST00000239243 SONP18583 2426 aaKnown RBP17.39■□□□□ 0.37
MSX2-201ENST00000239243 NPYP01303 97 aa17.39■□□□□ 0.37
MSX2-201ENST00000239243 TSPOP30536 169 aa17.39■□□□□ 0.37
MSX2-201ENST00000239243 FAM159AQ6UWV7 190 aa17.39■□□□□ 0.37
MSX2-201ENST00000239243 MAP1LC3AQ9H492 121 aa17.39■□□□□ 0.37
MSX2-201ENST00000239243 C16orf95Q9H693 158 aa17.39■□□□□ 0.37
MSX2-201ENST00000239243 LOC389332A0A1B0GUA5 103 aa17.38■□□□□ 0.37
MSX2-201ENST00000239243 EVI2AP22794 236 aa17.38■□□□□ 0.37
MSX2-201ENST00000239243 KIR3DS1Q14943 382 aa17.38■□□□□ 0.37
MSX2-201ENST00000239243 PHLDA3Q9Y5J5 127 aa17.38■□□□□ 0.37
MSX2-201ENST00000239243 C7orf71A4D174 169 aa17.37■□□□□ 0.37
MSX2-201ENST00000239243 SMKR1H3BMG3 65 aa17.37■□□□□ 0.37
MSX2-201ENST00000239243 CRXO43186 299 aaPredicted RBP17.37■□□□□ 0.37
MSX2-201ENST00000239243 NCR2O95944 276 aa17.37■□□□□ 0.37
MSX2-201ENST00000239243 C20orf144Q9BQM9 153 aa17.37■□□□□ 0.37
MSX2-201ENST00000239243 DLX4Q92988 240 aaPredicted RBP17.37■□□□□ 0.37
MSX2-201ENST00000239243 SCRT2Q9NQ03 307 aa17.37■□□□□ 0.37
MSX2-201ENST00000239243 ITPR2Q14571 2701 aa17.37■□□□□ 0.37
MSX2-201ENST00000239243 DUX3Q96PT4 197 aa17.36■□□□□ 0.37
MSX2-201ENST00000239243 MAP1LC3CQ9BXW4 147 aa17.36■□□□□ 0.37
MSX2-201ENST00000239243 TIMM8BQ9Y5J9 83 aaPredicted RBP17.36■□□□□ 0.37
MSX2-201ENST00000239243 DYNLRB2Q8TF09 96 aa17.36■□□□□ 0.37
MSX2-201ENST00000239243 PAM16Q9Y3D7 125 aa17.36■□□□□ 0.37
MSX2-201ENST00000239243 C20orf202A1L168 122 aa17.35■□□□□ 0.37
MSX2-201ENST00000239243 TDRG1Q3Y452 100 aa17.35■□□□□ 0.37
MSX2-201ENST00000239243 SYS1-DBNDD2H3BUS1 97 aa17.35■□□□□ 0.37
MSX2-201ENST00000239243 TNFRSF6BO95407 300 aa17.35■□□□□ 0.37
MSX2-201ENST00000239243 CDKN1BP46527 198 aa17.35■□□□□ 0.37
MSX2-201ENST00000239243 NDUFAF3Q9BU61 184 aa17.35■□□□□ 0.37
MSX2-201ENST00000239243 HILS1P60008 231 aa17.34■□□□□ 0.37
MSX2-201ENST00000239243 NXT2Q9NPJ8 142 aaKnown RBP17.34■□□□□ 0.37
MSX2-201ENST00000239243 TRAV12-3A0A0B4J271 114 aa17.33■□□□□ 0.36
MSX2-201ENST00000239243 M0R381 172 aa17.33■□□□□ 0.36
MSX2-201ENST00000239243 GNRH2O43555 120 aa17.33■□□□□ 0.36
MSX2-201ENST00000239243 RNASE3P12724 160 aaKnown RBP17.33■□□□□ 0.36
MSX2-201ENST00000239243 LINC01006Q8NI28 216 aa17.33■□□□□ 0.36
MSX2-201ENST00000239243 MRAP2Q96G30 205 aa17.33■□□□□ 0.36
MSX2-201ENST00000239243 FHL3Q13643 280 aa17.32■□□□□ 0.36
MSX2-201ENST00000239243 PET117Q6UWS5 81 aa17.32■□□□□ 0.36
MSX2-201ENST00000239243 TMEM61Q8N0U2 210 aa17.32■□□□□ 0.36
MSX2-201ENST00000239243 TSSC4Q9Y5U2 329 aaPredicted RBP17.32■□□□□ 0.36
MSX2-201ENST00000239243 IGKV3-20P01619 116 aa17.31■□□□□ 0.36
MSX2-201ENST00000239243 RAX2Q96IS3 184 aa17.31■□□□□ 0.36
MSX2-201ENST00000239243 DPH3P1Q9H4G8 78 aa17.31■□□□□ 0.36
MSX2-201ENST00000239243 CD28P10747 220 aa17.31■□□□□ 0.36
MSX2-201ENST00000239243 LINC00173Q6ZV60 143 aa17.31■□□□□ 0.36
MSX2-201ENST00000239243 OR2K2Q8NGT1 345 aa17.31■□□□□ 0.36
MSX2-201ENST00000239243 C14orf144Q96I85 54 aa17.31■□□□□ 0.36
MSX2-201ENST00000239243 JMJD8Q96S16 334 aa17.31■□□□□ 0.36
MSX2-201ENST00000239243 LINC01546A6NGU7 62 aa17.3■□□□□ 0.36
MSX2-201ENST00000239243 HBDP02042 147 aa17.3■□□□□ 0.36
MSX2-201ENST00000239243 AP1S3Q96PC3 154 aa17.3■□□□□ 0.36
MSX2-201ENST00000239243 ZNF747Q9BV97 191 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms