RNA–Protein interactions for RNA: ENST00000237380.11

MED28-201, Transcript of mediator complex subunit 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MED28, Length 10,868 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-201ENST00000237380 MED12Q93074 2177 aa5.89□□□□□ -1.47
MED28-201ENST00000237380 LOXP28300 417 aaPredicted RBP5.89□□□□□ -1.47
MED28-201ENST00000237380 UBE2D1P51668 147 aa5.89□□□□□ -1.47
MED28-201ENST00000237380 PNRC2Q9NPJ4 139 aaKnown RBP5.89□□□□□ -1.47
MED28-201ENST00000237380 ACACBO00763 2458 aa5.89□□□□□ -1.47
MED28-201ENST00000237380 A0A087WV48 116 aa5.89□□□□□ -1.47
MED28-201ENST00000237380 HIGD2BQ4VC39 106 aa5.89□□□□□ -1.47
MED28-201ENST00000237380 C9orf153Q5TBE3 101 aa5.89□□□□□ -1.47
MED28-201ENST00000237380 CRIPAKQ8N1N5 446 aa5.89□□□□□ -1.47
MED28-201ENST00000237380 LYRM9A8MSI8 78 aa5.89□□□□□ -1.47
MED28-201ENST00000237380 H7C423 109 aa5.89□□□□□ -1.47
MED28-201ENST00000237380 TDRG1Q3Y452 100 aa5.89□□□□□ -1.47
MED28-201ENST00000237380 FNDC4Q9H6D8 234 aaPredicted RBP5.89□□□□□ -1.47
MED28-201ENST00000237380 SYS1-DBNDD2H3BUS1 97 aa5.89□□□□□ -1.47
MED28-201ENST00000237380 FAM104BQ5XKR9 115 aa5.89□□□□□ -1.47
MED28-201ENST00000237380 C2orf16Q68DN1 1984 aa5.89□□□□□ -1.47
MED28-201ENST00000237380 RBM3P98179 157 aaKnown RBP5.89□□□□□ -1.47
MED28-201ENST00000237380 OCIAD2Q56VL3 154 aa5.89□□□□□ -1.47
MED28-201ENST00000237380 RNF185Q96GF1 192 aa5.89□□□□□ -1.47
MED28-201ENST00000237380 LINC00474Q9P2X8 69 aa5.89□□□□□ -1.47
MED28-201ENST00000237380 HAMPP81172 84 aa5.88□□□□□ -1.47
MED28-201ENST00000237380 IGKV1-39P01597 117 aa5.88□□□□□ -1.47
MED28-201ENST00000237380 IGKV1D-39P04432 117 aa5.88□□□□□ -1.47
MED28-201ENST00000237380 PRB3Q04118 309 aaPredicted RBP5.88□□□□□ -1.47
MED28-201ENST00000237380 GUSBP1Q15486 140 aa5.88□□□□□ -1.47
MED28-201ENST00000237380 PRR25Q96S07 402 aa5.88□□□□□ -1.47
MED28-201ENST00000237380 LDLRAD4O15165 306 aa5.88□□□□□ -1.47
MED28-201ENST00000237380 VOPP1Q96AW1 172 aa5.88□□□□□ -1.47
MED28-201ENST00000237380 hDV102S1A0JD36 115 aa5.88□□□□□ -1.47
MED28-201ENST00000237380 RNF126Q9BV68 326 aa5.88□□□□□ -1.47
MED28-201ENST00000237380 A4D1N5 150 aa5.88□□□□□ -1.47
MED28-201ENST00000237380 JMJD7-PLA2G4BH0Y9G9 81 aa5.88□□□□□ -1.47
MED28-201ENST00000237380 TRBV7-3A0A075B6L6 115 aa5.88□□□□□ -1.47
MED28-201ENST00000237380 XCL1P47992 114 aa5.88□□□□□ -1.47
MED28-201ENST00000237380 FBXL19-AS1Q494R0 122 aa5.88□□□□□ -1.47
MED28-201ENST00000237380 F8VRH5 84 aa5.88□□□□□ -1.47
MED28-201ENST00000237380 C10orf105Q8TEF2 133 aa5.88□□□□□ -1.47
MED28-201ENST00000237380 KLK9Q9UKQ9 250 aa5.88□□□□□ -1.47
MED28-201ENST00000237380 ODF1Q14990 250 aa5.87□□□□□ -1.47
MED28-201ENST00000237380 Q5BKY6 102 aa5.87□□□□□ -1.47
MED28-201ENST00000237380 FAM231DQ6ZW35 169 aa5.87□□□□□ -1.47
MED28-201ENST00000237380 SNAI2O43623 268 aa5.87□□□□□ -1.47
MED28-201ENST00000237380 PRR31Q5SQ13 230 aa5.87□□□□□ -1.47
MED28-201ENST00000237380 Q8TAT8 98 aa5.87□□□□□ -1.47
MED28-201ENST00000237380 TMEM263Q8WUH6 116 aaKnown RBP5.87□□□□□ -1.47
MED28-201ENST00000237380 HIST1H2BKO60814 126 aa5.87□□□□□ -1.47
MED28-201ENST00000237380 PROP1O75360 226 aa5.87□□□□□ -1.47
MED28-201ENST00000237380 HIST1H2BJP06899 126 aa5.87□□□□□ -1.47
MED28-201ENST00000237380 HIST1H2BOP23527 126 aa5.87□□□□□ -1.47
MED28-201ENST00000237380 HIST1H2BBP33778 126 aa5.87□□□□□ -1.47
MED28-201ENST00000237380 HIST1H2BDP58876 126 aa5.87□□□□□ -1.47
MED28-201ENST00000237380 HIST1H2BCP62807 126 aa5.87□□□□□ -1.47
MED28-201ENST00000237380 HIST2H2BEQ16778 126 aa5.87□□□□□ -1.47
MED28-201ENST00000237380 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.87□□□□□ -1.47
MED28-201ENST00000237380 HIST1H2BHQ93079 126 aa5.87□□□□□ -1.47
MED28-201ENST00000237380 HIST1H2BNQ99877 126 aa5.87□□□□□ -1.47
MED28-201ENST00000237380 HIST1H2BMQ99879 126 aa5.87□□□□□ -1.47
MED28-201ENST00000237380 PRO1854Q9UHT4 67 aa5.87□□□□□ -1.47
MED28-201ENST00000237380 A0A1B0GX51 115 aa5.87□□□□□ -1.47
MED28-201ENST00000237380 C16orf54Q6UWD8 224 aa5.87□□□□□ -1.47
MED28-201ENST00000237380 OPRPNQ99935 248 aaPredicted RBP5.87□□□□□ -1.47
MED28-201ENST00000237380 MED14OSP0DP75 135 aa5.87□□□□□ -1.47
MED28-201ENST00000237380 TRACP01848 142 aa5.87□□□□□ -1.47
MED28-201ENST00000237380 ETV2O00321 342 aaPredicted RBP5.87□□□□□ -1.47
MED28-201ENST00000237380 C10orf55Q5SWW7 151 aa5.87□□□□□ -1.47
MED28-201ENST00000237380 CASC2Q6XLA1 102 aa5.87□□□□□ -1.47
MED28-201ENST00000237380 GFI1Q99684 422 aa5.87□□□□□ -1.47
MED28-201ENST00000237380 IGHV3-16A0A0C4DH30 117 aa5.87□□□□□ -1.47
MED28-201ENST00000237380 F8W1H4 67 aa5.87□□□□□ -1.47
MED28-201ENST00000237380 VSIG2Q96IQ7 327 aa5.87□□□□□ -1.47
MED28-201ENST00000237380 KIAA1549LQ6ZVL6 1849 aa5.87□□□□□ -1.47
MED28-201ENST00000237380 C9JAW5 83 aa5.86□□□□□ -1.47
MED28-201ENST00000237380 NTF4P34130 210 aa5.86□□□□□ -1.47
MED28-201ENST00000237380 TIMM17AQ99595 171 aa5.86□□□□□ -1.47
MED28-201ENST00000237380 CENPVL3A0A0U1RRI6 287 aa5.86□□□□□ -1.47
MED28-201ENST00000237380 SIVA1O15304 175 aa5.86□□□□□ -1.47
MED28-201ENST00000237380 IGKV1-16P04430 117 aa5.86□□□□□ -1.47
MED28-201ENST00000237380 ZNF625Q96I27 306 aaPredicted RBP5.86□□□□□ -1.47
MED28-201ENST00000237380 ZC2HC1BQ5TFG8 222 aa5.86□□□□□ -1.47
MED28-201ENST00000237380 RNF138Q8WVD3 245 aa5.86□□□□□ -1.47
MED28-201ENST00000237380 ZNF106Q9H2Y7 1883 aaKnown RBP5.86□□□□□ -1.47
MED28-201ENST00000237380 TRBV10-1A0A0K0K1A3 114 aa5.86□□□□□ -1.47
MED28-201ENST00000237380 IGHV4-59P01825 116 aa5.86□□□□□ -1.47
MED28-201ENST00000237380 LINC00473A8K010 186 aa5.86□□□□□ -1.47
MED28-201ENST00000237380 FSHBP01225 129 aa5.86□□□□□ -1.47
MED28-201ENST00000237380 C8orf49Q96NF6 230 aa5.86□□□□□ -1.47
MED28-201ENST00000237380 TMEM256-PLSCR3K7ERE1 68 aa5.86□□□□□ -1.47
MED28-201ENST00000237380 MAPK1IP1LQ8NDC0 245 aa5.86□□□□□ -1.47
MED28-201ENST00000237380 SHISA9B4DS77 424 aa5.86□□□□□ -1.47
MED28-201ENST00000237380 PRORYQ9H606 182 aa5.86□□□□□ -1.47
MED28-201ENST00000237380 HCFC1P51610 2035 aa5.86□□□□□ -1.47
MED28-201ENST00000237380 TRAV4A0A0B4J268 109 aa5.86□□□□□ -1.47
MED28-201ENST00000237380 LGALS9BQ3B8N2 356 aa5.86□□□□□ -1.47
MED28-201ENST00000237380 LGALS9CQ6DKI2 356 aa5.86□□□□□ -1.47
MED28-201ENST00000237380 ALPK3Q96L96 1907 aa5.86□□□□□ -1.47
MED28-201ENST00000237380 IGKV1-12A0A0C4DH73 117 aa5.86□□□□□ -1.47
MED28-201ENST00000237380 POU2AF1Q16633 256 aa5.86□□□□□ -1.47
MED28-201ENST00000237380 RNF144BQ7Z419 303 aa5.86□□□□□ -1.47
MED28-201ENST00000237380 MEGF9Q9H1U4 602 aa5.86□□□□□ -1.47
MED28-201ENST00000237380 PRR30Q53SZ7 412 aaPredicted RBP5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms