RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 KRTAP10-9P60411 292 aa12.21□□□□□ -0.45
UBE3D-201ENST00000237186 SPANXN1Q5VSR9 72 aa12.21□□□□□ -0.45
UBE3D-201ENST00000237186 Q8N8P6 123 aa12.21□□□□□ -0.45
UBE3D-201ENST00000237186 OR2K2Q8NGT1 345 aa12.21□□□□□ -0.45
UBE3D-201ENST00000237186 IFI27L1Q96BM0 104 aa12.21□□□□□ -0.45
UBE3D-201ENST00000237186 UFC1Q9Y3C8 167 aa12.21□□□□□ -0.45
UBE3D-201ENST00000237186 GOLT1BQ9Y3E0 138 aa12.21□□□□□ -0.45
UBE3D-201ENST00000237186 FBN2P35556 2912 aa12.21□□□□□ -0.45
UBE3D-201ENST00000237186 CHD6Q8TD26 2715 aa12.21□□□□□ -0.46
UBE3D-201ENST00000237186 HINT1P49773 126 aaPredicted RBP12.21□□□□□ -0.46
UBE3D-201ENST00000237186 RPL11P62913 178 aaKnown RBP12.21□□□□□ -0.46
UBE3D-201ENST00000237186 TMEM95Q3KNT9 176 aa12.21□□□□□ -0.46
UBE3D-201ENST00000237186 NRACQ8N912 160 aa12.21□□□□□ -0.46
UBE3D-201ENST00000237186 DLEU1O43261 78 aa12.2□□□□□ -0.46
UBE3D-201ENST00000237186 TFPI2P48307 235 aa12.2□□□□□ -0.46
UBE3D-201ENST00000237186 OR1N2Q8NGR9 330 aa12.2□□□□□ -0.46
UBE3D-201ENST00000237186 DCANP1Q8TF63 244 aa12.2□□□□□ -0.46
UBE3D-201ENST00000237186 USP9YO00507 2555 aaPredicted RBP12.2□□□□□ -0.46
UBE3D-201ENST00000237186 KMT2BQ9UMN6 2715 aaPredicted RBP12.2□□□□□ -0.46
UBE3D-201ENST00000237186 CELSR2Q9HCU4 2923 aa12.19□□□□□ -0.46
UBE3D-201ENST00000237186 COX8AP10176 69 aa12.19□□□□□ -0.46
UBE3D-201ENST00000237186 GATA1P15976 413 aaPredicted RBP12.19□□□□□ -0.46
UBE3D-201ENST00000237186 H3BVH4 76 aa12.19□□□□□ -0.46
UBE3D-201ENST00000237186 G0S2P27469 103 aa12.19□□□□□ -0.46
UBE3D-201ENST00000237186 ID1P41134 155 aa12.19□□□□□ -0.46
UBE3D-201ENST00000237186 LEPP41159 167 aa12.19□□□□□ -0.46
UBE3D-201ENST00000237186 FXYD7P58549 80 aa12.19□□□□□ -0.46
UBE3D-201ENST00000237186 MRAP2Q96G30 205 aa12.19□□□□□ -0.46
UBE3D-201ENST00000237186 VPREB3Q9UKI3 123 aa12.19□□□□□ -0.46
UBE3D-201ENST00000237186 PTPN13Q12923 2485 aa12.18□□□□□ -0.46
UBE3D-201ENST00000237186 DEFB1P60022 68 aa12.18□□□□□ -0.46
UBE3D-201ENST00000237186 Q6YL49 198 aa12.18□□□□□ -0.46
UBE3D-201ENST00000237186 MYOZ3Q8TDC0 251 aa12.18□□□□□ -0.46
UBE3D-201ENST00000237186 F6UB75 175 aa12.17□□□□□ -0.46
UBE3D-201ENST00000237186 IGHV4-31P0DP07 118 aa12.17□□□□□ -0.46
UBE3D-201ENST00000237186 PLA2G2AP14555 144 aa12.17□□□□□ -0.46
UBE3D-201ENST00000237186 ASIPP42127 132 aa12.17□□□□□ -0.46
UBE3D-201ENST00000237186 ANXA2RQ3ZCQ2 193 aa12.17□□□□□ -0.46
UBE3D-201ENST00000237186 LRRC75A-AS1Q8N1F1 130 aa12.17□□□□□ -0.46
UBE3D-201ENST00000237186 BEX4Q9NWD9 120 aaPredicted RBP12.17□□□□□ -0.46
UBE3D-201ENST00000237186 CSPG4Q6UVK1 2322 aa12.17□□□□□ -0.46
UBE3D-201ENST00000237186 CSMD2Q7Z408 3487 aa12.17□□□□□ -0.46
UBE3D-201ENST00000237186 POLQO75417 2590 aa12.17□□□□□ -0.46
UBE3D-201ENST00000237186 ANKRD17O75179 2603 aaKnown RBP12.17□□□□□ -0.46
UBE3D-201ENST00000237186 CENPEQ02224 2701 aa12.17□□□□□ -0.46
UBE3D-201ENST00000237186 KLLNB2CW77 178 aa12.17□□□□□ -0.46
UBE3D-201ENST00000237186 RNF223E7ERA6 249 aa12.17□□□□□ -0.46
UBE3D-201ENST00000237186 ELANEP08246 267 aa12.17□□□□□ -0.46
UBE3D-201ENST00000237186 PSMG4Q5JS54 123 aa12.17□□□□□ -0.46
UBE3D-201ENST00000237186 RNASE4P34096 147 aaKnown RBP12.16□□□□□ -0.46
UBE3D-201ENST00000237186 C12orf54Q6X4T0 127 aa12.16□□□□□ -0.46
UBE3D-201ENST00000237186 IGKV3-7A0A075B6H7 116 aa12.15□□□□□ -0.46
UBE3D-201ENST00000237186 J3QKU1 62 aa12.15□□□□□ -0.46
UBE3D-201ENST00000237186 EDN2P20800 178 aa12.15□□□□□ -0.46
UBE3D-201ENST00000237186 S100A4P26447 101 aaKnown RBP12.15□□□□□ -0.46
UBE3D-201ENST00000237186 DEFB113Q30KQ7 82 aa12.15□□□□□ -0.46
UBE3D-201ENST00000237186 C10orf99Q6UWK7 81 aa12.15□□□□□ -0.46
UBE3D-201ENST00000237186 RNF152Q8N8N0 203 aa12.15□□□□□ -0.46
UBE3D-201ENST00000237186 MAPK1IP1LQ8NDC0 245 aa12.15□□□□□ -0.46
UBE3D-201ENST00000237186 ORAOV1Q8WV07 137 aa12.15□□□□□ -0.46
UBE3D-201ENST00000237186 ZMAT4Q9H898 229 aa12.15□□□□□ -0.46
UBE3D-201ENST00000237186 TP73-AS1Q9UF72 201 aa12.15□□□□□ -0.46
UBE3D-201ENST00000237186 MAP1AP78559 2803 aaPredicted RBP12.15□□□□□ -0.46
UBE3D-201ENST00000237186 J3KRW8 73 aa12.14□□□□□ -0.47
UBE3D-201ENST00000237186 LGALS9O00182 355 aa12.14□□□□□ -0.47
UBE3D-201ENST00000237186 FGF6P10767 208 aa12.14□□□□□ -0.47
UBE3D-201ENST00000237186 ANKRD39Q53RE8 183 aa12.14□□□□□ -0.47
UBE3D-201ENST00000237186 MPV17L2Q567V2 206 aa12.14□□□□□ -0.47
UBE3D-201ENST00000237186 ODF3Q96PU9 254 aa12.14□□□□□ -0.47
UBE3D-201ENST00000237186 TRAV26-2A0A0B4J265 109 aa12.14□□□□□ -0.47
UBE3D-201ENST00000237186 CD5LO43866 347 aa12.14□□□□□ -0.47
UBE3D-201ENST00000237186 NXPH4O95158 308 aa12.14□□□□□ -0.47
UBE3D-201ENST00000237186 NUDT3O95989 172 aa12.14□□□□□ -0.47
UBE3D-201ENST00000237186 LGALS1P09382 135 aaKnown RBP12.14□□□□□ -0.47
UBE3D-201ENST00000237186 RNASE3P12724 160 aaKnown RBP12.14□□□□□ -0.47
UBE3D-201ENST00000237186 LAGE3Q14657 143 aa12.14□□□□□ -0.47
UBE3D-201ENST00000237186 KIR3DS1Q14943 382 aa12.14□□□□□ -0.47
UBE3D-201ENST00000237186 TMEM158Q8WZ71 300 aa12.14□□□□□ -0.47
UBE3D-201ENST00000237186 DPH3P1Q9H4G8 78 aa12.14□□□□□ -0.47
UBE3D-201ENST00000237186 ZNF702PQ9H963 129 aa12.14□□□□□ -0.47
UBE3D-201ENST00000237186 PHLDA3Q9Y5J5 127 aa12.14□□□□□ -0.47
UBE3D-201ENST00000237186 SRD5A1P18405 259 aa12.13□□□□□ -0.47
UBE3D-201ENST00000237186 ODF1Q14990 250 aa12.13□□□□□ -0.47
UBE3D-201ENST00000237186 BVES-AS1Q5T3Y7 98 aa12.13□□□□□ -0.47
UBE3D-201ENST00000237186 C2orf91Q6ZV80 131 aa12.13□□□□□ -0.47
UBE3D-201ENST00000237186 POM121L12Q8N7R1 296 aa12.13□□□□□ -0.47
UBE3D-201ENST00000237186 UBE2E2Q96LR5 201 aa12.13□□□□□ -0.47
UBE3D-201ENST00000237186 C20orf78Q9BR46 151 aa12.13□□□□□ -0.47
UBE3D-201ENST00000237186 ABCA12Q86UK0 2595 aa12.12□□□□□ -0.47
UBE3D-201ENST00000237186 M0R381 172 aa12.12□□□□□ -0.47
UBE3D-201ENST00000237186 ATP5LO75964 103 aa12.12□□□□□ -0.47
UBE3D-201ENST00000237186 BOD1L2Q8IYS8 172 aa12.12□□□□□ -0.47
UBE3D-201ENST00000237186 K7EMI3 77 aa12.12□□□□□ -0.47
UBE3D-201ENST00000237186 GNRH2O43555 120 aa12.12□□□□□ -0.47
UBE3D-201ENST00000237186 SMIM17P0DL12 118 aa12.12□□□□□ -0.47
UBE3D-201ENST00000237186 DKK2Q9UBU2 259 aa12.12□□□□□ -0.47
UBE3D-201ENST00000237186 NAV2Q8IVL1 2488 aa12.12□□□□□ -0.47
UBE3D-201ENST00000237186 Q5PR19 223 aa12.11□□□□□ -0.47
UBE3D-201ENST00000237186 C18orf15Q96N68 181 aa12.11□□□□□ -0.47
UBE3D-201ENST00000237186 SMIM2Q9BVW6 85 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 170.6 ms