RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 SLX1AQ9BQ83 275 aa10.5□□□□□ -0.73
NEK4-201ENST00000233027 UBL5Q9BZL1 73 aa10.5□□□□□ -0.73
NEK4-201ENST00000233027 KIR2DL5BA0A0G2JN68 375 aa10.5□□□□□ -0.73
NEK4-201ENST00000233027 KIR2DL5BA0A0G2JPC4 375 aa10.5□□□□□ -0.73
NEK4-201ENST00000233027 GRNP28799 593 aaKnown RBP10.5□□□□□ -0.73
NEK4-201ENST00000233027 HERVK_113P63121 156 aa10.5□□□□□ -0.73
NEK4-201ENST00000233027 KIR2DL5AQ8N109 375 aa10.5□□□□□ -0.73
NEK4-201ENST00000233027 SHISA9B4DS77 424 aa10.49□□□□□ -0.73
NEK4-201ENST00000233027 CR1LQ2VPA4 569 aa10.49□□□□□ -0.73
NEK4-201ENST00000233027 C15orf53Q8NAA6 179 aa10.49□□□□□ -0.73
NEK4-201ENST00000233027 TMEM126AQ9H061 195 aa10.49□□□□□ -0.73
NEK4-201ENST00000233027 NOP10Q9NPE3 64 aaKnown RBP10.49□□□□□ -0.73
NEK4-201ENST00000233027 TRAV13-2A0A0B4J235 113 aa10.48□□□□□ -0.73
NEK4-201ENST00000233027 ANGP03950 147 aaKnown RBP10.48□□□□□ -0.73
NEK4-201ENST00000233027 DEFB136Q30KP8 78 aa10.48□□□□□ -0.73
NEK4-201ENST00000233027 DENND4CQ5VZ89 1909 aa10.48□□□□□ -0.73
NEK4-201ENST00000233027 Q8NFD4 153 aa10.48□□□□□ -0.73
NEK4-201ENST00000233027 DSCR8Q96T75 97 aa10.48□□□□□ -0.73
NEK4-201ENST00000233027 MSRB1Q9NZV6 116 aa10.48□□□□□ -0.73
NEK4-201ENST00000233027 XCL1P47992 114 aa10.47□□□□□ -0.73
NEK4-201ENST00000233027 SH2D6Q7Z4S9 175 aa10.47□□□□□ -0.73
NEK4-201ENST00000233027 ZNF407Q9C0G0 2248 aa10.47□□□□□ -0.73
NEK4-201ENST00000233027 GP9P14770 177 aa10.47□□□□□ -0.73
NEK4-201ENST00000233027 MRAPQ8TCY5 172 aa10.47□□□□□ -0.73
NEK4-201ENST00000233027 KAAG1Q9UBP8 84 aa10.47□□□□□ -0.73
NEK4-201ENST00000233027 U3KQE9 123 aa10.47□□□□□ -0.73
NEK4-201ENST00000233027 TRACP01848 142 aa10.47□□□□□ -0.73
NEK4-201ENST00000233027 INTS1Q8N201 2190 aaKnown RBP10.47□□□□□ -0.73
NEK4-201ENST00000233027 A0A0J9YY99 117 aa10.47□□□□□ -0.73
NEK4-201ENST00000233027 IGHG4P01861 327 aa10.47□□□□□ -0.73
NEK4-201ENST00000233027 ANKRD29Q8N6D5 301 aa10.47□□□□□ -0.73
NEK4-201ENST00000233027 C3orf56Q8N813 242 aa10.47□□□□□ -0.73
NEK4-201ENST00000233027 PRB1P04280 392 aa10.46□□□□□ -0.73
NEK4-201ENST00000233027 CRYGCP07315 174 aa10.46□□□□□ -0.73
NEK4-201ENST00000233027 CFC1BP0CG36 223 aa10.46□□□□□ -0.73
NEK4-201ENST00000233027 CFC1P0CG37 223 aa10.46□□□□□ -0.73
NEK4-201ENST00000233027 Q9H8V8 135 aa10.46□□□□□ -0.73
NEK4-201ENST00000233027 CRYBA4P53673 196 aa10.46□□□□□ -0.73
NEK4-201ENST00000233027 PATE2Q6UY27 113 aa10.46□□□□□ -0.73
NEK4-201ENST00000233027 ZNF493Q6ZR52 646 aa10.46□□□□□ -0.73
NEK4-201ENST00000233027 TANC1Q9C0D5 1861 aa10.46□□□□□ -0.74
NEK4-201ENST00000233027 ANKRD39Q53RE8 183 aa10.46□□□□□ -0.74
NEK4-201ENST00000233027 Q6ZQT7 251 aa10.46□□□□□ -0.74
NEK4-201ENST00000233027 APRG1Q8IVJ8 170 aa10.46□□□□□ -0.74
NEK4-201ENST00000233027 DEFB125Q8N687 156 aa10.46□□□□□ -0.74
NEK4-201ENST00000233027 IGHV4-59P01825 116 aa10.46□□□□□ -0.74
NEK4-201ENST00000233027 KRTAP27-1Q3LI81 207 aa10.46□□□□□ -0.74
NEK4-201ENST00000233027 I3L2K1 104 aa10.45□□□□□ -0.74
NEK4-201ENST00000233027 LHBP01229 141 aa10.45□□□□□ -0.74
NEK4-201ENST00000233027 PLA2G2CQ5R387 149 aa10.45□□□□□ -0.74
NEK4-201ENST00000233027 FOXI2Q6ZQN5 318 aa10.45□□□□□ -0.74
NEK4-201ENST00000233027 RBAKDNA6NC62 111 aa10.45□□□□□ -0.74
NEK4-201ENST00000233027 DEFB112Q30KQ8 113 aa10.45□□□□□ -0.74
NEK4-201ENST00000233027 PLXNB3Q9ULL4 1909 aa10.45□□□□□ -0.74
NEK4-201ENST00000233027 CITED1Q99966 193 aa10.44□□□□□ -0.74
NEK4-201ENST00000233027 WT1P19544 449 aaPredicted RBP10.44□□□□□ -0.74
NEK4-201ENST00000233027 C8orf31Q8N9H6 132 aa10.44□□□□□ -0.74
NEK4-201ENST00000233027 GTSF1Q8WW33 167 aa10.44□□□□□ -0.74
NEK4-201ENST00000233027 HOXD3P31249 432 aaPredicted RBP10.44□□□□□ -0.74
NEK4-201ENST00000233027 IGLL5B9A064 214 aa10.44□□□□□ -0.74
NEK4-201ENST00000233027 BAALC-AS2P0C853 105 aa10.44□□□□□ -0.74
NEK4-201ENST00000233027 K7EIM0 57 aa10.43□□□□□ -0.74
NEK4-201ENST00000233027 FRMD6-AS1P0C7T7 363 aa10.43□□□□□ -0.74
NEK4-201ENST00000233027 RHOHQ15669 191 aa10.43□□□□□ -0.74
NEK4-201ENST00000233027 DEFB105AQ8NG35 78 aa10.43□□□□□ -0.74
NEK4-201ENST00000233027 SS18L2Q9UHA2 77 aa10.43□□□□□ -0.74
NEK4-201ENST00000233027 IGHV4-4A0A075B6R2 117 aa10.43□□□□□ -0.74
NEK4-201ENST00000233027 APOC4P55056 127 aa10.43□□□□□ -0.74
NEK4-201ENST00000233027 DOCK7Q96N67 2140 aa10.43□□□□□ -0.74
NEK4-201ENST00000233027 TTTY13Q9BZ97 58 aa10.43□□□□□ -0.74
NEK4-201ENST00000233027 SRSF2Q01130 221 aaKnown RBP10.42□□□□□ -0.74
NEK4-201ENST00000233027 TEX48A0A1B0GUV7 120 aa10.42□□□□□ -0.74
NEK4-201ENST00000233027 SLURP1P55000 103 aa10.42□□□□□ -0.74
NEK4-201ENST00000233027 COA6Q5JTJ3 125 aaKnown RBP10.42□□□□□ -0.74
NEK4-201ENST00000233027 ARFGEF3Q5TH69 2177 aa10.42□□□□□ -0.74
NEK4-201ENST00000233027 NOTCH4Q99466 2003 aa10.42□□□□□ -0.74
NEK4-201ENST00000233027 IGHV7-81A0A0B4J1V7 117 aa10.42□□□□□ -0.74
NEK4-201ENST00000233027 PLA2G5P39877 138 aa10.42□□□□□ -0.74
NEK4-201ENST00000233027 J3QLI3 93 aa10.41□□□□□ -0.74
NEK4-201ENST00000233027 IGLV2-23P01705 113 aa10.41□□□□□ -0.74
NEK4-201ENST00000233027 LINC01545Q5VT33 79 aa10.41□□□□□ -0.74
NEK4-201ENST00000233027 C5orf38Q86SI9 138 aa10.41□□□□□ -0.74
NEK4-201ENST00000233027 MUSTN1Q8IVN3 82 aa10.41□□□□□ -0.74
NEK4-201ENST00000233027 IGLV2-14P01704 120 aa10.41□□□□□ -0.74
NEK4-201ENST00000233027 ELANEP08246 267 aa10.41□□□□□ -0.74
NEK4-201ENST00000233027 IGHV4-38-2P0DP08 117 aa10.41□□□□□ -0.74
NEK4-201ENST00000233027 PRAC2D3DTV9 90 aa10.41□□□□□ -0.74
NEK4-201ENST00000233027 CENPVL3A0A0U1RRI6 287 aa10.41□□□□□ -0.74
NEK4-201ENST00000233027 hADV29S1A0JD25 119 aa10.41□□□□□ -0.74
NEK4-201ENST00000233027 H3BUA1 57 aa10.41□□□□□ -0.74
NEK4-201ENST00000233027 BOD1L2Q8IYS8 172 aa10.41□□□□□ -0.74
NEK4-201ENST00000233027 NPBQ8NG41 125 aa10.4□□□□□ -0.74
NEK4-201ENST00000233027 LYPD6Q86Y78 171 aa10.4□□□□□ -0.74
NEK4-201ENST00000233027 SLC25A29Q8N8R3 303 aa10.4□□□□□ -0.74
NEK4-201ENST00000233027 FXYD2P54710 66 aa10.4□□□□□ -0.75
NEK4-201ENST00000233027 ZFP2Q6ZN57 461 aa10.4□□□□□ -0.75
NEK4-201ENST00000233027 FAM167A-AS1Q96KT0 104 aa10.4□□□□□ -0.75
NEK4-201ENST00000233027 IGLV11-55A0A075B6I3 123 aa10.4□□□□□ -0.75
NEK4-201ENST00000233027 B5MCH6 92 aa10.4□□□□□ -0.75
NEK4-201ENST00000233027 IGKV1-17P01599 117 aa10.4□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 147.8 ms