RNA–Protein interactions for RNA: ENST00000225655.5

PFN1-201, Transcript of profilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-201ENST00000225655 LINC00467Q9BRT7 94 aa12.82□□□□□ -0.36
PFN1-201ENST00000225655 VPS13DQ5THJ4 4388 aa12.81□□□□□ -0.36
PFN1-201ENST00000225655 IGHV1OR15-1A0A075B7D0 117 aa12.81□□□□□ -0.36
PFN1-201ENST00000225655 ZNF705GA8MUZ8 300 aaPredicted RBP12.81□□□□□ -0.36
PFN1-201ENST00000225655 ZNF324O75467 553 aaPredicted RBP12.81□□□□□ -0.36
PFN1-201ENST00000225655 CLLU1Q5K131 121 aa12.81□□□□□ -0.36
PFN1-201ENST00000225655 EIF4E3Q8N5X7 224 aaKnown RBP12.81□□□□□ -0.36
PFN1-201ENST00000225655 TMEM263Q8WUH6 116 aaKnown RBP12.81□□□□□ -0.36
PFN1-201ENST00000225655 SMDT1Q9H4I9 107 aa12.81□□□□□ -0.36
PFN1-201ENST00000225655 DKK2Q9UBU2 259 aa12.81□□□□□ -0.36
PFN1-201ENST00000225655 NAGKQ9UJ70 344 aa12.81□□□□□ -0.36
PFN1-201ENST00000225655 P0DMU3 169 aa12.8□□□□□ -0.36
PFN1-201ENST00000225655 FAM231AP0DMU4 169 aa12.8□□□□□ -0.36
PFN1-201ENST00000225655 FAM231CP0DMU5 169 aa12.8□□□□□ -0.36
PFN1-201ENST00000225655 CEBPGP53567 150 aa12.8□□□□□ -0.36
PFN1-201ENST00000225655 FAM162BQ5T6X4 162 aa12.8□□□□□ -0.36
PFN1-201ENST00000225655 SMIM12Q96EX1 92 aa12.8□□□□□ -0.36
PFN1-201ENST00000225655 KCNS1Q96KK3 526 aa12.8□□□□□ -0.36
PFN1-201ENST00000225655 BIN3Q9NQY0 253 aa12.8□□□□□ -0.36
PFN1-201ENST00000225655 TRGV11A0A075B6L2 103 aa12.79□□□□□ -0.36
PFN1-201ENST00000225655 FABP5P3A8MUU1 101 aa12.79□□□□□ -0.36
PFN1-201ENST00000225655 IFITM2Q01629 132 aa12.79□□□□□ -0.36
PFN1-201ENST00000225655 ZNF674Q2M3X9 581 aa12.79□□□□□ -0.36
PFN1-201ENST00000225655 CENPWQ5EE01 88 aa12.79□□□□□ -0.36
PFN1-201ENST00000225655 FAM222AQ5U5X8 452 aa12.79□□□□□ -0.36
PFN1-201ENST00000225655 COX8CQ7Z4L0 72 aa12.79□□□□□ -0.36
PFN1-201ENST00000225655 POM121L12Q8N7R1 296 aa12.79□□□□□ -0.36
PFN1-201ENST00000225655 FAM210BQ96KR6 192 aa12.79□□□□□ -0.36
PFN1-201ENST00000225655 DERL1Q9BUN8 251 aa12.79□□□□□ -0.36
PFN1-201ENST00000225655 SDF2L1Q9HCN8 221 aa12.79□□□□□ -0.36
PFN1-201ENST00000225655 SNURFLB1AK76 121 aa12.78□□□□□ -0.36
PFN1-201ENST00000225655 ANXA2RQ3ZCQ2 193 aa12.78□□□□□ -0.36
PFN1-201ENST00000225655 MUC21Q5SSG8 566 aa12.78□□□□□ -0.36
PFN1-201ENST00000225655 KRTAP17-1Q9BYP8 105 aa12.78□□□□□ -0.36
PFN1-201ENST00000225655 NHLRC2Q8NBF2 726 aa12.77□□□□□ -0.37
PFN1-201ENST00000225655 ZC2HC1AQ96GY0 325 aa12.77□□□□□ -0.37
PFN1-201ENST00000225655 PARLQ9H300 379 aa12.77□□□□□ -0.37
PFN1-201ENST00000225655 DNAH10Q8IVF4 4471 aa12.76□□□□□ -0.37
PFN1-201ENST00000225655 MGST1P10620 155 aaKnown RBP12.76□□□□□ -0.37
PFN1-201ENST00000225655 ZNF415Q09FC8 603 aa12.76□□□□□ -0.37
PFN1-201ENST00000225655 RNASE8Q8TDE3 154 aaKnown RBP12.76□□□□□ -0.37
PFN1-201ENST00000225655 TIMM8BQ9Y5J9 83 aaPredicted RBP12.76□□□□□ -0.37
PFN1-201ENST00000225655 RAB19A4D1S5 217 aa12.75□□□□□ -0.37
PFN1-201ENST00000225655 C9JCJ5 164 aa12.75□□□□□ -0.37
PFN1-201ENST00000225655 ZNF80P51504 273 aaPredicted RBP12.75□□□□□ -0.37
PFN1-201ENST00000225655 TDRG1Q3Y452 100 aa12.75□□□□□ -0.37
PFN1-201ENST00000225655 IBA57Q5T440 356 aaKnown RBP12.75□□□□□ -0.37
PFN1-201ENST00000225655 DAZAP1Q96EP5 407 aaKnown RBP12.75□□□□□ -0.37
PFN1-201ENST00000225655 LYRM9A8MSI8 78 aa12.74□□□□□ -0.37
PFN1-201ENST00000225655 SH2D1AO60880 128 aa12.74□□□□□ -0.37
PFN1-201ENST00000225655 ORM1P02763 201 aa12.74□□□□□ -0.37
PFN1-201ENST00000225655 SRP19P09132 144 aaKnown RBP12.74□□□□□ -0.37
PFN1-201ENST00000225655 AZU1P20160 251 aa12.74□□□□□ -0.37
PFN1-201ENST00000225655 FAM74A3Q4VXF1 159 aa12.74□□□□□ -0.37
PFN1-201ENST00000225655 PRR27Q6MZM9 219 aa12.74□□□□□ -0.37
PFN1-201ENST00000225655 LINC00336Q6ZUF6 198 aa12.74□□□□□ -0.37
PFN1-201ENST00000225655 SMIM7Q9BQ49 75 aa12.74□□□□□ -0.37
PFN1-201ENST00000225655 MLST8Q9BVC4 326 aa12.74□□□□□ -0.37
PFN1-201ENST00000225655 ZNF727A8MUV8 499 aa12.73□□□□□ -0.37
PFN1-201ENST00000225655 Q6ZQT7 251 aa12.73□□□□□ -0.37
PFN1-201ENST00000225655 DNAH6Q9C0G6 4158 aa12.73□□□□□ -0.37
PFN1-201ENST00000225655 B4DEV8 164 aa12.72□□□□□ -0.37
PFN1-201ENST00000225655 PRM2P04554 102 aa12.72□□□□□ -0.37
PFN1-201ENST00000225655 DAD1P61803 113 aa12.72□□□□□ -0.37
PFN1-201ENST00000225655 OR5I1Q13606 314 aa12.72□□□□□ -0.37
PFN1-201ENST00000225655 GSN-AS1Q9NRJ2 163 aa12.72□□□□□ -0.37
PFN1-201ENST00000225655 HTN3P15516 51 aa12.71□□□□□ -0.37
PFN1-201ENST00000225655 S100A4P26447 101 aaKnown RBP12.71□□□□□ -0.37
PFN1-201ENST00000225655 ASIPP42127 132 aa12.71□□□□□ -0.37
PFN1-201ENST00000225655 TCL1AP56279 114 aa12.71□□□□□ -0.37
PFN1-201ENST00000225655 DAZ2Q13117 558 aaKnown RBP12.71□□□□□ -0.37
PFN1-201ENST00000225655 SOHLH1Q5JUK2 328 aa12.71□□□□□ -0.37
PFN1-201ENST00000225655 SPXQ9BT56 116 aa12.71□□□□□ -0.37
PFN1-201ENST00000225655 NOP10Q9NPE3 64 aaKnown RBP12.71□□□□□ -0.37
PFN1-201ENST00000225655 TP53TG3Q9ULZ0 132 aa12.71□□□□□ -0.37
PFN1-201ENST00000225655 LY96Q9Y6Y9 160 aa12.71□□□□□ -0.37
PFN1-201ENST00000225655 TRBV20OR9-2A0A075B6H5 130 aa12.7□□□□□ -0.38
PFN1-201ENST00000225655 TYMSP04818 313 aa12.7□□□□□ -0.38
PFN1-201ENST00000225655 LGALS9BQ3B8N2 356 aa12.7□□□□□ -0.38
PFN1-201ENST00000225655 LINC01559Q495D7 138 aa12.7□□□□□ -0.38
PFN1-201ENST00000225655 PLAC8L1A1L4L8 177 aa12.69□□□□□ -0.38
PFN1-201ENST00000225655 XKRY2A2RUG3 117 aa12.69□□□□□ -0.38
PFN1-201ENST00000225655 M0R036 132 aa12.69□□□□□ -0.38
PFN1-201ENST00000225655 P01737 135 aa12.69□□□□□ -0.38
PFN1-201ENST00000225655 CRIP1P50238 77 aa12.69□□□□□ -0.38
PFN1-201ENST00000225655 RNF212Q495C1 297 aa12.69□□□□□ -0.38
PFN1-201ENST00000225655 TMEM88Q6PEY1 159 aa12.69□□□□□ -0.38
PFN1-201ENST00000225655 UQCC3Q6UW78 93 aa12.69□□□□□ -0.38
PFN1-201ENST00000225655 UBE2DNLQ8IWF7 75 aa12.69□□□□□ -0.38
PFN1-201ENST00000225655 C11orf72Q8NBR9 251 aa12.69□□□□□ -0.38
PFN1-201ENST00000225655 IGHV3-16A0A0C4DH30 117 aa12.68□□□□□ -0.38
PFN1-201ENST00000225655 GNRH2O43555 120 aa12.68□□□□□ -0.38
PFN1-201ENST00000225655 IGLV2-8P01709 118 aa12.68□□□□□ -0.38
PFN1-201ENST00000225655 DEFB130BP0DP73 79 aa12.68□□□□□ -0.38
PFN1-201ENST00000225655 DEFB130AP0DP74 79 aa12.68□□□□□ -0.38
PFN1-201ENST00000225655 RPS20P60866 119 aaKnown RBP12.68□□□□□ -0.38
PFN1-201ENST00000225655 SRSF3P84103 164 aaKnown RBP12.68□□□□□ -0.38
PFN1-201ENST00000225655 TMEM241Q24JQ0 296 aa12.68□□□□□ -0.38
PFN1-201ENST00000225655 C11orf21Q9P2W6 132 aa12.68□□□□□ -0.38
PFN1-201ENST00000225655 HECTD4Q9Y4D8 3996 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 117.3 ms