RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 TMEM158Q8WZ71 300 aa7.43□□□□□ -1.22
CCDC113-201ENST00000219299 ZNF48Q96MX3 618 aaPredicted RBP7.43□□□□□ -1.22
CCDC113-201ENST00000219299 ZNF492Q9P255 531 aa7.43□□□□□ -1.22
CCDC113-201ENST00000219299 LGALS1P09382 135 aaKnown RBP7.42□□□□□ -1.22
CCDC113-201ENST00000219299 COX8AP10176 69 aa7.42□□□□□ -1.22
CCDC113-201ENST00000219299 CT83Q5H943 113 aa7.42□□□□□ -1.22
CCDC113-201ENST00000219299 PPDPFLQ8WWR9 84 aa7.42□□□□□ -1.22
CCDC113-201ENST00000219299 MCRIP2Q9BUT9 160 aaKnown RBP7.42□□□□□ -1.22
CCDC113-201ENST00000219299 PRR31Q5SQ13 230 aa7.42□□□□□ -1.22
CCDC113-201ENST00000219299 RHPN1-AS1Q9BWJ2 59 aa7.42□□□□□ -1.22
CCDC113-201ENST00000219299 C1QTNF4Q9BXJ3 329 aa7.42□□□□□ -1.22
CCDC113-201ENST00000219299 SPANXDQ9BXN6 97 aa7.42□□□□□ -1.22
CCDC113-201ENST00000219299 TRBV20-1A0A075B6N2 111 aa7.42□□□□□ -1.22
CCDC113-201ENST00000219299 PROP1O75360 226 aa7.42□□□□□ -1.22
CCDC113-201ENST00000219299 FXYD7P58549 80 aa7.42□□□□□ -1.22
CCDC113-201ENST00000219299 LY6G5BQ8NDX9 201 aa7.42□□□□□ -1.22
CCDC113-201ENST00000219299 LYPD6BQ8NI32 183 aa7.42□□□□□ -1.22
CCDC113-201ENST00000219299 WFDC12Q8WWY7 111 aa7.42□□□□□ -1.22
CCDC113-201ENST00000219299 KIR2DL5BA0A0G2JN68 375 aa7.42□□□□□ -1.22
CCDC113-201ENST00000219299 KIR2DL5BA0A0G2JPC4 375 aa7.42□□□□□ -1.22
CCDC113-201ENST00000219299 PRSS57Q6UWY2 283 aa7.42□□□□□ -1.22
CCDC113-201ENST00000219299 KIR2DL5AQ8N109 375 aa7.42□□□□□ -1.22
CCDC113-201ENST00000219299 IGHV7-81A0A0B4J1V7 117 aa7.41□□□□□ -1.22
CCDC113-201ENST00000219299 SH2D1AO60880 128 aa7.41□□□□□ -1.22
CCDC113-201ENST00000219299 IGHV4-31P0DP07 118 aa7.41□□□□□ -1.22
CCDC113-201ENST00000219299 S100A7L2Q5SY68 101 aa7.41□□□□□ -1.22
CCDC113-201ENST00000219299 ODF3L1Q8IXM7 274 aa7.41□□□□□ -1.22
CCDC113-201ENST00000219299 REV3LO60673 3130 aa7.41□□□□□ -1.22
CCDC113-201ENST00000219299 COA6Q5JTJ3 125 aaKnown RBP7.41□□□□□ -1.22
CCDC113-201ENST00000219299 IGKV2-40A0A087WW87 121 aaPredicted RBP7.41□□□□□ -1.22
CCDC113-201ENST00000219299 GAGE12HA6NDE8 117 aa7.41□□□□□ -1.22
CCDC113-201ENST00000219299 C9JAW5 83 aa7.41□□□□□ -1.22
CCDC113-201ENST00000219299 IGKV2D-40P01614 121 aaPredicted RBP7.41□□□□□ -1.22
CCDC113-201ENST00000219299 ZNF726P1Q15940 193 aa7.41□□□□□ -1.22
CCDC113-201ENST00000219299 Q8N9W7 124 aa7.41□□□□□ -1.22
CCDC113-201ENST00000219299 DAZ1Q9NQZ3 744 aaKnown RBP7.41□□□□□ -1.22
CCDC113-201ENST00000219299 FRYLO94915 3013 aa7.41□□□□□ -1.22
CCDC113-201ENST00000219299 IGLC7A0M8Q6 106 aa7.41□□□□□ -1.22
CCDC113-201ENST00000219299 SLAQ13239 276 aa7.41□□□□□ -1.22
CCDC113-201ENST00000219299 EDA2RQ9HAV5 297 aa7.41□□□□□ -1.22
CCDC113-201ENST00000219299 SLC25A20O43772 301 aa7.4□□□□□ -1.22
CCDC113-201ENST00000219299 ETDBQ3ZM63 59 aa7.4□□□□□ -1.22
CCDC113-201ENST00000219299 BVES-AS1Q5T3Y7 98 aa7.4□□□□□ -1.22
CCDC113-201ENST00000219299 Q86TA4 180 aa7.4□□□□□ -1.22
CCDC113-201ENST00000219299 LSM4Q9Y4Z0 139 aaKnown RBP7.4□□□□□ -1.22
CCDC113-201ENST00000219299 PCSK5Q92824 1860 aa7.4□□□□□ -1.22
CCDC113-201ENST00000219299 A0A1W2PPM0 123 aa7.4□□□□□ -1.22
CCDC113-201ENST00000219299 IGFL4Q6B9Z1 124 aa7.4□□□□□ -1.22
CCDC113-201ENST00000219299 AMN1Q8IY45 258 aa7.4□□□□□ -1.22
CCDC113-201ENST00000219299 ZNF295-AS1Q8N0V1 137 aa7.4□□□□□ -1.22
CCDC113-201ENST00000219299 DPH3Q96FX2 82 aa7.4□□□□□ -1.22
CCDC113-201ENST00000219299 C9orf153Q5TBE3 101 aa7.4□□□□□ -1.23
CCDC113-201ENST00000219299 FAM231DQ6ZW35 169 aa7.4□□□□□ -1.23
CCDC113-201ENST00000219299 V9GYV3 84 aa7.4□□□□□ -1.23
CCDC113-201ENST00000219299 FSTL3O95633 263 aa7.4□□□□□ -1.23
CCDC113-201ENST00000219299 DPH3P1Q9H4G8 78 aa7.4□□□□□ -1.23
CCDC113-201ENST00000219299 ELANEP08246 267 aa7.39□□□□□ -1.23
CCDC113-201ENST00000219299 CFAP161Q6P656 301 aa7.39□□□□□ -1.23
CCDC113-201ENST00000219299 OVOL2Q9BRP0 275 aa7.39□□□□□ -1.23
CCDC113-201ENST00000219299 IGHV3-64A0A075B6Q5 118 aa7.39□□□□□ -1.23
CCDC113-201ENST00000219299 LGALS9BQ3B8N2 356 aa7.39□□□□□ -1.23
CCDC113-201ENST00000219299 LGALS9CQ6DKI2 356 aa7.39□□□□□ -1.23
CCDC113-201ENST00000219299 CDPF1Q6NVV7 123 aa7.39□□□□□ -1.23
CCDC113-201ENST00000219299 LINC00477Q96M19 166 aa7.39□□□□□ -1.23
CCDC113-201ENST00000219299 CPAMD8Q8IZJ3 1885 aa7.39□□□□□ -1.23
CCDC113-201ENST00000219299 IGKV3D-20A0A0C4DH25 116 aa7.39□□□□□ -1.23
CCDC113-201ENST00000219299 IGHV1-24A0A0C4DH33 117 aa7.39□□□□□ -1.23
CCDC113-201ENST00000219299 VCYO14598 125 aa7.39□□□□□ -1.23
CCDC113-201ENST00000219299 IGLV2-14P01704 120 aa7.39□□□□□ -1.23
CCDC113-201ENST00000219299 CITED1Q99966 193 aa7.39□□□□□ -1.23
CCDC113-201ENST00000219299 TRGV4A0A0C4DH28 118 aa7.39□□□□□ -1.23
CCDC113-201ENST00000219299 SMIM27A0A1W2PRY6 76 aa7.39□□□□□ -1.23
CCDC113-201ENST00000219299 AZU1P20160 251 aa7.39□□□□□ -1.23
CCDC113-201ENST00000219299 SIVA1O15304 175 aa7.38□□□□□ -1.23
CCDC113-201ENST00000219299 IL15RAQ13261 267 aa7.38□□□□□ -1.23
CCDC113-201ENST00000219299 DYNAPQ8N1N2 210 aa7.38□□□□□ -1.23
CCDC113-201ENST00000219299 ARMS2P0C7Q2 107 aa7.38□□□□□ -1.23
CCDC113-201ENST00000219299 HIST1H4AP62805 103 aaKnown RBP7.38□□□□□ -1.23
CCDC113-201ENST00000219299 DEFB136Q30KP8 78 aa7.38□□□□□ -1.23
CCDC113-201ENST00000219299 LINC00479Q96M42 142 aa7.38□□□□□ -1.23
CCDC113-201ENST00000219299 PRADC1Q9BSG0 188 aa7.38□□□□□ -1.23
CCDC113-201ENST00000219299 MAP1AP78559 2803 aaPredicted RBP7.38□□□□□ -1.23
CCDC113-201ENST00000219299 INAFM1C9JVW0 142 aa7.38□□□□□ -1.23
CCDC113-201ENST00000219299 TNFRSF13BO14836 293 aaPredicted RBP7.38□□□□□ -1.23
CCDC113-201ENST00000219299 HTN3P15516 51 aa7.38□□□□□ -1.23
CCDC113-201ENST00000219299 C5orf56Q8N8D9 126 aa7.38□□□□□ -1.23
CCDC113-201ENST00000219299 LINC00574Q9H8X3 128 aa7.38□□□□□ -1.23
CCDC113-201ENST00000219299 CHD6Q8TD26 2715 aa7.38□□□□□ -1.23
CCDC113-201ENST00000219299 ZNF415Q09FC8 603 aa7.38□□□□□ -1.23
CCDC113-201ENST00000219299 TAL2Q16559 108 aa7.38□□□□□ -1.23
CCDC113-201ENST00000219299 TMEM86BQ8N661 226 aa7.38□□□□□ -1.23
CCDC113-201ENST00000219299 NPBQ8NG41 125 aa7.38□□□□□ -1.23
CCDC113-201ENST00000219299 H3BMM0 161 aa7.37□□□□□ -1.23
CCDC113-201ENST00000219299 UBE2WQ96B02 151 aa7.37□□□□□ -1.23
CCDC113-201ENST00000219299 LINC01619G3V211 115 aa7.37□□□□□ -1.23
CCDC113-201ENST00000219299 SMKR1H3BMG3 65 aa7.37□□□□□ -1.23
CCDC113-201ENST00000219299 FCN3O75636 299 aa7.37□□□□□ -1.23
CCDC113-201ENST00000219299 HAPLN4Q86UW8 402 aa7.37□□□□□ -1.23
CCDC113-201ENST00000219299 FAM104BQ5XKR9 115 aa7.37□□□□□ -1.23
CCDC113-201ENST00000219299 NEGR1Q7Z3B1 354 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms