RNA–Protein interactions for RNA: ENST00000217109.8

CSTF1-201, Transcript of cleavage stimulation factor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF1, Length 4,290 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-201ENST00000217109 IGHV4-38-2P0DP08 117 aa7.56□□□□□ -1.2
CSTF1-201ENST00000217109 MRGPRG-AS1Q2M3A8 158 aa7.56□□□□□ -1.2
CSTF1-201ENST00000217109 PIP4P2Q8N4L2 257 aa7.56□□□□□ -1.2
CSTF1-201ENST00000217109 TTTY13Q9BZ97 58 aa7.56□□□□□ -1.2
CSTF1-201ENST00000217109 CD5LO43866 347 aa7.55□□□□□ -1.2
CSTF1-201ENST00000217109 FSTL3O95633 263 aa7.55□□□□□ -1.2
CSTF1-201ENST00000217109 IGHV4-39P01824 125 aa7.55□□□□□ -1.2
CSTF1-201ENST00000217109 CD300EQ496F6 205 aaPredicted RBP7.55□□□□□ -1.2
CSTF1-201ENST00000217109 DGAT2L7PQ6IED9 249 aa7.55□□□□□ -1.2
CSTF1-201ENST00000217109 NEGR1Q7Z3B1 354 aa7.55□□□□□ -1.2
CSTF1-201ENST00000217109 OR9G4Q8NGQ1 327 aa7.55□□□□□ -1.2
CSTF1-201ENST00000217109 SIRPDQ9H106 197 aa7.55□□□□□ -1.2
CSTF1-201ENST00000217109 ATMQ13315 3056 aa7.55□□□□□ -1.2
CSTF1-201ENST00000217109 FAM223BA6NKX1 122 aa7.55□□□□□ -1.2
CSTF1-201ENST00000217109 GAGE1Q13065 139 aa7.55□□□□□ -1.2
CSTF1-201ENST00000217109 TMEM95Q3KNT9 176 aa7.55□□□□□ -1.2
CSTF1-201ENST00000217109 FAM223AQ8IWN6 122 aa7.55□□□□□ -1.2
CSTF1-201ENST00000217109 ARL6IP6Q8N6S5 226 aa7.55□□□□□ -1.2
CSTF1-201ENST00000217109 SYT8Q8NBV8 401 aa7.55□□□□□ -1.2
CSTF1-201ENST00000217109 B4DSR2 109 aa7.55□□□□□ -1.2
CSTF1-201ENST00000217109 MSMBP08118 114 aa7.55□□□□□ -1.2
CSTF1-201ENST00000217109 ANXA2RQ3ZCQ2 193 aa7.55□□□□□ -1.2
CSTF1-201ENST00000217109 C11orf44Q8N8P7 122 aa7.55□□□□□ -1.2
CSTF1-201ENST00000217109 NPIPB6E9PJ23 425 aa7.55□□□□□ -1.2
CSTF1-201ENST00000217109 LGALS9BQ3B8N2 356 aa7.55□□□□□ -1.2
CSTF1-201ENST00000217109 LINC01545Q5VT33 79 aa7.55□□□□□ -1.2
CSTF1-201ENST00000217109 LGALS9CQ6DKI2 356 aa7.55□□□□□ -1.2
CSTF1-201ENST00000217109 SPATA12Q7Z6I5 190 aa7.55□□□□□ -1.2
CSTF1-201ENST00000217109 Q8N976 141 aa7.55□□□□□ -1.2
CSTF1-201ENST00000217109 NRGNQ92686 78 aa7.55□□□□□ -1.2
CSTF1-201ENST00000217109 TACC2O95359 2948 aa7.55□□□□□ -1.2
CSTF1-201ENST00000217109 APOMO95445 188 aa7.54□□□□□ -1.2
CSTF1-201ENST00000217109 ORMDL2Q53FV1 153 aa7.54□□□□□ -1.2
CSTF1-201ENST00000217109 DPH3P1Q9H4G8 78 aa7.54□□□□□ -1.2
CSTF1-201ENST00000217109 DAZ1Q9NQZ3 744 aaKnown RBP7.54□□□□□ -1.2
CSTF1-201ENST00000217109 CHTOPQ9Y3Y2 248 aaKnown RBP7.54□□□□□ -1.2
CSTF1-201ENST00000217109 GAGE12BA1L429 117 aa7.54□□□□□ -1.2
CSTF1-201ENST00000217109 USMG5Q96IX5 58 aa7.54□□□□□ -1.2
CSTF1-201ENST00000217109 MRPL35Q9NZE8 188 aaKnown RBP7.54□□□□□ -1.2
CSTF1-201ENST00000217109 C19orf84I3L1E1 186 aa7.54□□□□□ -1.2
CSTF1-201ENST00000217109 TRBV12-3P01733 135 aa7.54□□□□□ -1.2
CSTF1-201ENST00000217109 PSMB2P49721 201 aa7.54□□□□□ -1.2
CSTF1-201ENST00000217109 COTL1Q14019 142 aa7.54□□□□□ -1.2
CSTF1-201ENST00000217109 CSTL1Q9H114 145 aa7.54□□□□□ -1.2
CSTF1-201ENST00000217109 GNRH2O43555 120 aa7.53□□□□□ -1.2
CSTF1-201ENST00000217109 PRSS2P07478 247 aa7.53□□□□□ -1.2
CSTF1-201ENST00000217109 SYNJ2BPP57105 145 aa7.53□□□□□ -1.2
CSTF1-201ENST00000217109 LMO4P61968 165 aa7.53□□□□□ -1.2
CSTF1-201ENST00000217109 MTORP42345 2549 aa7.53□□□□□ -1.2
CSTF1-201ENST00000217109 UNQ9165/PRO28630Q6UXU0 137 aa7.53□□□□□ -1.2
CSTF1-201ENST00000217109 C5orf56Q8N8D9 126 aa7.53□□□□□ -1.2
CSTF1-201ENST00000217109 ITLN2Q8WWU7 325 aaPredicted RBP7.53□□□□□ -1.2
CSTF1-201ENST00000217109 URB1-AS1Q96HZ7 61 aa7.53□□□□□ -1.2
CSTF1-201ENST00000217109 CCDC140Q96MF4 163 aa7.53□□□□□ -1.2
CSTF1-201ENST00000217109 CYSLTR1Q9Y271 337 aa7.53□□□□□ -1.2
CSTF1-201ENST00000217109 PTPRBP23467 1997 aa7.53□□□□□ -1.2
CSTF1-201ENST00000217109 TRAV12-2A0A075B6T6 113 aa7.53□□□□□ -1.2
CSTF1-201ENST00000217109 Q8N8P6 123 aa7.53□□□□□ -1.2
CSTF1-201ENST00000217109 IGHV4-30-2A0A087WSY4 118 aa7.52□□□□□ -1.2
CSTF1-201ENST00000217109 IGHV3-73A0A0B4J1V6 119 aa7.52□□□□□ -1.2
CSTF1-201ENST00000217109 SAMD5Q5TGI4 173 aa7.52□□□□□ -1.2
CSTF1-201ENST00000217109 SCRT2Q9NQ03 307 aa7.52□□□□□ -1.2
CSTF1-201ENST00000217109 SMAD5-AS1Q9Y6J3 95 aa7.52□□□□□ -1.2
CSTF1-201ENST00000217109 SUMO2P61956 95 aaKnown RBP7.52□□□□□ -1.21
CSTF1-201ENST00000217109 A0A1W2PPR1 153 aa7.52□□□□□ -1.21
CSTF1-201ENST00000217109 PPP1R17O96001 155 aa7.52□□□□□ -1.21
CSTF1-201ENST00000217109 CHAC1Q9BUX1 264 aa7.52□□□□□ -1.21
CSTF1-201ENST00000217109 MEGF9Q9H1U4 602 aa7.52□□□□□ -1.21
CSTF1-201ENST00000217109 HIVEP2P31629 2446 aa7.52□□□□□ -1.21
CSTF1-201ENST00000217109 EPG5Q9HCE0 2579 aa7.52□□□□□ -1.21
CSTF1-201ENST00000217109 ZNF462Q96JM2 2506 aa7.52□□□□□ -1.21
CSTF1-201ENST00000217109 IGHV3-64A0A075B6Q5 118 aa7.52□□□□□ -1.21
CSTF1-201ENST00000217109 ZNF815PA8K554 130 aa7.52□□□□□ -1.21
CSTF1-201ENST00000217109 NDUFA4O00483 81 aa7.52□□□□□ -1.21
CSTF1-201ENST00000217109 C11orf71Q6IPW1 123 aa7.52□□□□□ -1.21
CSTF1-201ENST00000217109 MRPL16Q9NX20 251 aaKnown RBP7.52□□□□□ -1.21
CSTF1-201ENST00000217109 SMPXQ9UHP9 88 aa7.52□□□□□ -1.21
CSTF1-201ENST00000217109 K7EMI3 77 aa7.51□□□□□ -1.21
CSTF1-201ENST00000217109 TRBV6-1A0A0K0K1D8 114 aa7.51□□□□□ -1.21
CSTF1-201ENST00000217109 A0A1W2PRX2 142 aa7.51□□□□□ -1.21
CSTF1-201ENST00000217109 LGALS3P17931 250 aaKnown RBP7.51□□□□□ -1.21
CSTF1-201ENST00000217109 DEFB125Q8N687 156 aa7.51□□□□□ -1.21
CSTF1-201ENST00000217109 TMEM238LA0A1B0GVL6 79 aa7.51□□□□□ -1.21
CSTF1-201ENST00000217109 A6NJY4 79 aa7.51□□□□□ -1.21
CSTF1-201ENST00000217109 SPINK13Q1W4C9 94 aa7.51□□□□□ -1.21
CSTF1-201ENST00000217109 C2orf66Q6UXQ4 117 aa7.51□□□□□ -1.21
CSTF1-201ENST00000217109 SPOCK3Q9BQ16 436 aa7.51□□□□□ -1.21
CSTF1-201ENST00000217109 IGKV3D-20A0A0C4DH25 116 aa7.5□□□□□ -1.21
CSTF1-201ENST00000217109 IGF1P05019 195 aa7.5□□□□□ -1.21
CSTF1-201ENST00000217109 RIPPLY3P57055 190 aa7.5□□□□□ -1.21
CSTF1-201ENST00000217109 KLK9Q9UKQ9 250 aa7.5□□□□□ -1.21
CSTF1-201ENST00000217109 H7C1H1 209 aa7.5□□□□□ -1.21
CSTF1-201ENST00000217109 PAX2Q02962 417 aa7.5□□□□□ -1.21
CSTF1-201ENST00000217109 ZNF48Q96MX3 618 aaPredicted RBP7.5□□□□□ -1.21
CSTF1-201ENST00000217109 DUX3Q96PT4 197 aa7.5□□□□□ -1.21
CSTF1-201ENST00000217109 BEX4Q9NWD9 120 aaPredicted RBP7.5□□□□□ -1.21
CSTF1-201ENST00000217109 RNF223E7ERA6 249 aa7.5□□□□□ -1.21
CSTF1-201ENST00000217109 GAS8-AS1O95177 125 aa7.5□□□□□ -1.21
CSTF1-201ENST00000217109 IGHV4-59P01825 116 aa7.5□□□□□ -1.21
CSTF1-201ENST00000217109 LINC01559Q495D7 138 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms