RNA–Protein interactions for RNA: ENST00000216414.12

CDKN3-201, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best)

Gene CDKN3, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-201ENST00000216414 CFDP00746 253 aaPredicted RBP0.32□□□□□ -2.36
CDKN3-201ENST00000216414 OXTP01178 125 aa0.32□□□□□ -2.36
CDKN3-201ENST00000216414 IGHV3-30P01768 117 aa0.32□□□□□ -2.36
CDKN3-201ENST00000216414 IGKCP01834 107 aa0.32□□□□□ -2.36
CDKN3-201ENST00000216414 C1QBP02746 253 aa0.32□□□□□ -2.36
CDKN3-201ENST00000216414 TCRAP04437 139 aa0.32□□□□□ -2.36
CDKN3-201ENST00000216414 SLC25A5P05141 298 aaKnown RBP0.32□□□□□ -2.36
CDKN3-201ENST00000216414 LINC00032P0C843 101 aa0.32□□□□□ -2.36
CDKN3-201ENST00000216414 AKAIN1P0CW23 69 aa0.32□□□□□ -2.36
CDKN3-201ENST00000216414 IGHV3-30-5P0DP03 117 aa0.32□□□□□ -2.36
CDKN3-201ENST00000216414 CCL4P13236 92 aa0.32□□□□□ -2.36
CDKN3-201ENST00000216414 CYBAP13498 195 aa0.32□□□□□ -2.36
CDKN3-201ENST00000216414 CCL5P13501 91 aa0.32□□□□□ -2.36
CDKN3-201ENST00000216414 ADCYAP1P18509 176 aa0.32□□□□□ -2.36
CDKN3-201ENST00000216414 PDE6GP18545 87 aa0.32□□□□□ -2.36
CDKN3-201ENST00000216414 FGF7P21781 194 aa0.32□□□□□ -2.36
CDKN3-201ENST00000216414 CBLN1P23435 193 aa0.32□□□□□ -2.36
CDKN3-201ENST00000216414 SPINT3P49223 89 aa0.32□□□□□ -2.36
CDKN3-201ENST00000216414 POLR2HP52434 150 aaKnown RBP0.32□□□□□ -2.36
CDKN3-201ENST00000216414 ZNF137PP52743 207 aa0.32□□□□□ -2.36
CDKN3-201ENST00000216414 ATP5EP56381 51 aaPredicted RBP0.32□□□□□ -2.36
CDKN3-201ENST00000216414 TPPP2P59282 170 aa0.32□□□□□ -2.36
CDKN3-201ENST00000216414 FXYD4P59646 89 aa0.32□□□□□ -2.36
CDKN3-201ENST00000216414 RPL37AP61513 92 aaKnown RBP0.32□□□□□ -2.36
CDKN3-201ENST00000216414 UBE2G1P62253 170 aa0.32□□□□□ -2.36
CDKN3-201ENST00000216414 RPL38P63173 70 aaKnown RBP0.32□□□□□ -2.36
CDKN3-201ENST00000216414 DCDP81605 110 aaKnown RBP0.32□□□□□ -2.36
CDKN3-201ENST00000216414 COX6A2Q02221 97 aa0.32□□□□□ -2.36
CDKN3-201ENST00000216414 MIR22HGQ0VDD5 57 aa0.32□□□□□ -2.36
CDKN3-201ENST00000216414 KLKP1Q107X0 134 aa0.32□□□□□ -2.36
CDKN3-201ENST00000216414 ALX1Q15699 326 aa0.32□□□□□ -2.36
CDKN3-201ENST00000216414 KISS1Q15726 138 aa0.32□□□□□ -2.36
CDKN3-201ENST00000216414 ZNF56Q15929 161 aa0.32□□□□□ -2.36
CDKN3-201ENST00000216414 LTC4SQ16873 150 aa0.32□□□□□ -2.36
CDKN3-201ENST00000216414 SMIM21Q3B7S5 101 aa0.32□□□□□ -2.36
CDKN3-201ENST00000216414 C6orf52Q5T4I8 152 aa0.32□□□□□ -2.36
CDKN3-201ENST00000216414 TMEM244Q5VVB8 128 aa0.32□□□□□ -2.36
CDKN3-201ENST00000216414 Q5XG85 94 aa0.32□□□□□ -2.36
CDKN3-201ENST00000216414 SPATA8Q6RVD6 105 aa0.32□□□□□ -2.36
CDKN3-201ENST00000216414 ALKAL1Q6UXT8 129 aa0.32□□□□□ -2.36
CDKN3-201ENST00000216414 ZNF833PQ6ZTB9 187 aa0.32□□□□□ -2.36
CDKN3-201ENST00000216414 OTOSQ8NHW6 89 aa0.32□□□□□ -2.36
CDKN3-201ENST00000216414 VSTM2AQ8TAG5 236 aa0.32□□□□□ -2.36
CDKN3-201ENST00000216414 RNASE6Q93091 150 aaKnown RBP0.32□□□□□ -2.36
CDKN3-201ENST00000216414 DIRC1Q969H9 104 aa0.32□□□□□ -2.36
CDKN3-201ENST00000216414 ZNF625Q96I27 306 aaPredicted RBP0.32□□□□□ -2.36
CDKN3-201ENST00000216414 FXYD6Q9H0Q3 95 aa0.32□□□□□ -2.36
CDKN3-201ENST00000216414 C16orf95Q9H693 158 aa0.32□□□□□ -2.36
CDKN3-201ENST00000216414 OTORQ9NRC9 128 aa0.32□□□□□ -2.36
CDKN3-201ENST00000216414 TMEM14BQ9NUH8 114 aa0.32□□□□□ -2.36
CDKN3-201ENST00000216414 GNG8Q9UK08 70 aa0.32□□□□□ -2.36
CDKN3-201ENST00000216414 NDUFAF1Q9Y375 327 aa0.32□□□□□ -2.36
CDKN3-201ENST00000216414 UHRF1BP1LA0JNW5 1464 aa0.32□□□□□ -2.36
CDKN3-201ENST00000216414 NEO1Q92859 1461 aa0.32□□□□□ -2.36
CDKN3-201ENST00000216414 CCDC88AQ3V6T2 1871 aa0.32□□□□□ -2.36
CDKN3-201ENST00000216414 MDC1Q14676 2089 aaKnown RBP0.32□□□□□ -2.36
CDKN3-201ENST00000216414 BRWD1Q9NSI6 2320 aa0.32□□□□□ -2.36
CDKN3-201ENST00000216414 SNRNP200O75643 2136 aaKnown RBP0.32□□□□□ -2.36
CDKN3-201ENST00000216414 NCKAP5O14513 1909 aa0.32□□□□□ -2.36
CDKN3-201ENST00000216414 MYLKQ15746 1914 aa0.32□□□□□ -2.36
CDKN3-201ENST00000216414 PLXNB3Q9ULL4 1909 aa0.32□□□□□ -2.36
CDKN3-201ENST00000216414 DSPPQ9NZW4 1301 aa0.32□□□□□ -2.36
CDKN3-201ENST00000216414 RP1P56715 2156 aa0.32□□□□□ -2.36
CDKN3-201ENST00000216414 CHD5Q8TDI0 1954 aa0.32□□□□□ -2.36
CDKN3-201ENST00000216414 TMEM2Q9UHN6 1383 aa0.32□□□□□ -2.36
CDKN3-201ENST00000216414 SPAG17Q6Q759 2223 aa0.32□□□□□ -2.36
CDKN3-201ENST00000216414 TRPM6Q9BX84 2022 aa0.31□□□□□ -2.36
CDKN3-201ENST00000216414 TECPR2O15040 1411 aa0.31□□□□□ -2.36
CDKN3-201ENST00000216414 CD109Q6YHK3 1445 aa0.31□□□□□ -2.36
CDKN3-201ENST00000216414 FGD6Q6ZV73 1430 aa0.31□□□□□ -2.36
CDKN3-201ENST00000216414 CACNA1SQ13698 1873 aa0.31□□□□□ -2.36
CDKN3-201ENST00000216414 NUMA1Q14980 2115 aa0.31□□□□□ -2.36
CDKN3-201ENST00000216414 ZFHX2Q9C0A1 2572 aaPredicted RBP0.31□□□□□ -2.36
CDKN3-201ENST00000216414 ATG2AQ2TAZ0 1938 aa0.31□□□□□ -2.36
CDKN3-201ENST00000216414 CCDC141Q6ZP82 1450 aa0.31□□□□□ -2.36
CDKN3-201ENST00000216414 CEP164Q9UPV0 1460 aa0.31□□□□□ -2.36
CDKN3-201ENST00000216414 WDR7Q9Y4E6 1490 aa0.31□□□□□ -2.36
CDKN3-201ENST00000216414 FREM1Q5H8C1 2179 aa0.31□□□□□ -2.36
CDKN3-201ENST00000216414 TRBV7-1A0A0A6YYK4 115 aa0.31□□□□□ -2.36
CDKN3-201ENST00000216414 CTXND1A0A1B0GTU2 59 aa0.31□□□□□ -2.36
CDKN3-201ENST00000216414 C20orf202A1L168 122 aa0.31□□□□□ -2.36
CDKN3-201ENST00000216414 TMEM262E9PQX1 116 aa0.31□□□□□ -2.36
CDKN3-201ENST00000216414 ATP6V1G2-DDX39BF2Z307 99 aa0.31□□□□□ -2.36
CDKN3-201ENST00000216414 M0R2P5 195 aa0.31□□□□□ -2.36
CDKN3-201ENST00000216414 SPINK1P00995 79 aa0.31□□□□□ -2.36
CDKN3-201ENST00000216414 IGF2P01344 180 aa0.31□□□□□ -2.36
CDKN3-201ENST00000216414 TNFP01375 233 aa0.31□□□□□ -2.36
CDKN3-201ENST00000216414 MT-ND4LP03901 98 aa0.31□□□□□ -2.36
CDKN3-201ENST00000216414 CSN2P05814 226 aa0.31□□□□□ -2.36
CDKN3-201ENST00000216414 CD14P08571 375 aa0.31□□□□□ -2.36
CDKN3-201ENST00000216414 COX6CP09669 75 aa0.31□□□□□ -2.36
CDKN3-201ENST00000216414 PIRTP0C851 137 aa0.31□□□□□ -2.36
CDKN3-201ENST00000216414 TRAPPC2P0DI81 140 aa0.31□□□□□ -2.36
CDKN3-201ENST00000216414 TRAPPC2BP0DI82 140 aa0.31□□□□□ -2.36
CDKN3-201ENST00000216414 MPC1LP0DKB6 136 aa0.31□□□□□ -2.36
CDKN3-201ENST00000216414 LYNX1P0DP58 116 aa0.31□□□□□ -2.36
CDKN3-201ENST00000216414 RNASE4P34096 147 aaKnown RBP0.31□□□□□ -2.36
CDKN3-201ENST00000216414 FOXA3P55318 350 aaPredicted RBP0.31□□□□□ -2.36
CDKN3-201ENST00000216414 SPINK7P58062 85 aa0.31□□□□□ -2.36
CDKN3-201ENST00000216414 ELOF1P60002 83 aaKnown RBP0.31□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms