RNA–Protein interactions for RNA: ENST00000187762.6

TMEM38A-201, Transcript of transmembrane protein 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM38A, Length 2,649 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38A-201ENST00000187762 LYPD1Q8N2G4 141 aa11.5□□□□□ -0.57
TMEM38A-201ENST00000187762 Q8NA96 180 aa11.5□□□□□ -0.57
TMEM38A-201ENST00000187762 SCNM1Q9BWG6 230 aa11.5□□□□□ -0.57
TMEM38A-201ENST00000187762 H7C1H1 209 aa11.49□□□□□ -0.57
TMEM38A-201ENST00000187762 ATP5J2P56134 94 aa11.49□□□□□ -0.57
TMEM38A-201ENST00000187762 DYNLRB1Q9NP97 96 aa11.49□□□□□ -0.57
TMEM38A-201ENST00000187762 MDFICQ9P1T7 246 aa11.49□□□□□ -0.57
TMEM38A-201ENST00000187762 RAXQ9Y2V3 346 aa11.49□□□□□ -0.57
TMEM38A-201ENST00000187762 MALRD1Q5VYJ5 2156 aa11.49□□□□□ -0.57
TMEM38A-201ENST00000187762 ABCA1O95477 2261 aa11.49□□□□□ -0.57
TMEM38A-201ENST00000187762 TCF15Q12870 199 aa11.49□□□□□ -0.57
TMEM38A-201ENST00000187762 PLEKHB2Q96CS7 222 aa11.49□□□□□ -0.57
TMEM38A-201ENST00000187762 RELNP78509 3460 aa11.49□□□□□ -0.57
TMEM38A-201ENST00000187762 ZNF815PA8K554 130 aa11.48□□□□□ -0.57
TMEM38A-201ENST00000187762 E7EQL1 145 aa11.48□□□□□ -0.57
TMEM38A-201ENST00000187762 IGHV1-8P0DP01 117 aa11.48□□□□□ -0.57
TMEM38A-201ENST00000187762 EFNA4P52798 201 aa11.48□□□□□ -0.57
TMEM38A-201ENST00000187762 LAGE3Q14657 143 aa11.48□□□□□ -0.57
TMEM38A-201ENST00000187762 SCGB1D4Q6XE38 83 aa11.48□□□□□ -0.57
TMEM38A-201ENST00000187762 LINC00311Q8N616 119 aa11.48□□□□□ -0.57
TMEM38A-201ENST00000187762 OR10J6PQ8NGY7 276 aa11.48□□□□□ -0.57
TMEM38A-201ENST00000187762 LYNX1G3V0Z9 82 aa11.48□□□□□ -0.57
TMEM38A-201ENST00000187762 LYNX1P0DP58 116 aa11.48□□□□□ -0.57
TMEM38A-201ENST00000187762 VMA21Q3ZAQ7 101 aa11.48□□□□□ -0.57
TMEM38A-201ENST00000187762 TMEM155Q4W5P6 130 aa11.48□□□□□ -0.57
TMEM38A-201ENST00000187762 TMEM126AQ9H061 195 aa11.48□□□□□ -0.57
TMEM38A-201ENST00000187762 TRAV12-1A0A0B4J245 112 aa11.47□□□□□ -0.57
TMEM38A-201ENST00000187762 PRADC1Q9BSG0 188 aa11.47□□□□□ -0.57
TMEM38A-201ENST00000187762 ZNF575Q86XF7 245 aa11.47□□□□□ -0.57
TMEM38A-201ENST00000187762 C15orf53Q8NAA6 179 aa11.47□□□□□ -0.57
TMEM38A-201ENST00000187762 PRSS33Q8NF86 280 aa11.47□□□□□ -0.57
TMEM38A-201ENST00000187762 ODF3Q96PU9 254 aa11.47□□□□□ -0.57
TMEM38A-201ENST00000187762 SHANK2-AS3Q9BTD1 123 aa11.47□□□□□ -0.57
TMEM38A-201ENST00000187762 ONECUT1Q9UBC0 465 aa11.47□□□□□ -0.57
TMEM38A-201ENST00000187762 LRBAP50851 2863 aa11.46□□□□□ -0.57
TMEM38A-201ENST00000187762 C9JAW5 83 aa11.46□□□□□ -0.57
TMEM38A-201ENST00000187762 TPRP12270 2363 aaKnown RBP11.46□□□□□ -0.57
TMEM38A-201ENST00000187762 DCHS2Q6V1P9 2916 aa11.46□□□□□ -0.58
TMEM38A-201ENST00000187762 PLGLAQ15195 96 aa11.46□□□□□ -0.58
TMEM38A-201ENST00000187762 C3orf56Q8N813 242 aa11.46□□□□□ -0.58
TMEM38A-201ENST00000187762 CNFNQ9BYD5 112 aa11.46□□□□□ -0.58
TMEM38A-201ENST00000187762 CSMD1Q96PZ7 3565 aa11.46□□□□□ -0.58
TMEM38A-201ENST00000187762 H3BRN7 92 aa11.45□□□□□ -0.58
TMEM38A-201ENST00000187762 ZNF80P51504 273 aaPredicted RBP11.45□□□□□ -0.58
TMEM38A-201ENST00000187762 CRIP2P52943 208 aaPredicted RBP11.45□□□□□ -0.58
TMEM38A-201ENST00000187762 DTX2Q86UW9 622 aa11.45□□□□□ -0.58
TMEM38A-201ENST00000187762 Q8N1Y9 231 aa11.45□□□□□ -0.58
TMEM38A-201ENST00000187762 C8orf31Q8N9H6 132 aa11.45□□□□□ -0.58
TMEM38A-201ENST00000187762 PRR25Q96S07 402 aa11.45□□□□□ -0.58
TMEM38A-201ENST00000187762 COX8CQ7Z4L0 72 aa11.45□□□□□ -0.58
TMEM38A-201ENST00000187762 VKORC1Q9BQB6 163 aa11.45□□□□□ -0.58
TMEM38A-201ENST00000187762 CSDC2Q9Y534 153 aaKnown RBP11.45□□□□□ -0.58
TMEM38A-201ENST00000187762 ASCL5Q7RTU5 278 aa11.44□□□□□ -0.58
TMEM38A-201ENST00000187762 C10orf126Q8N4M7 172 aa11.44□□□□□ -0.58
TMEM38A-201ENST00000187762 NTN5Q8WTR8 489 aaPredicted RBP11.44□□□□□ -0.58
TMEM38A-201ENST00000187762 NRGNQ92686 78 aa11.44□□□□□ -0.58
TMEM38A-201ENST00000187762 LINC01587Q99440 93 aa11.44□□□□□ -0.58
TMEM38A-201ENST00000187762 IGKV2-40A0A087WW87 121 aaPredicted RBP11.44□□□□□ -0.58
TMEM38A-201ENST00000187762 MRPS12O15235 138 aaKnown RBP11.44□□□□□ -0.58
TMEM38A-201ENST00000187762 IGKV2D-40P01614 121 aaPredicted RBP11.44□□□□□ -0.58
TMEM38A-201ENST00000187762 CFC1BP0CG36 223 aa11.44□□□□□ -0.58
TMEM38A-201ENST00000187762 CFC1P0CG37 223 aa11.44□□□□□ -0.58
TMEM38A-201ENST00000187762 SLC25A16P16260 332 aa11.44□□□□□ -0.58
TMEM38A-201ENST00000187762 RPL27AP46776 148 aaKnown RBP11.44□□□□□ -0.58
TMEM38A-201ENST00000187762 KAAG1Q9UBP8 84 aa11.44□□□□□ -0.58
TMEM38A-201ENST00000187762 TRAV8-4A0A0B4J246 113 aa11.43□□□□□ -0.58
TMEM38A-201ENST00000187762 COX6B1P14854 86 aa11.43□□□□□ -0.58
TMEM38A-201ENST00000187762 COX7A1P24310 79 aa11.43□□□□□ -0.58
TMEM38A-201ENST00000187762 ORM1P02763 201 aa11.42□□□□□ -0.58
TMEM38A-201ENST00000187762 C5orf47Q569G3 176 aa11.42□□□□□ -0.58
TMEM38A-201ENST00000187762 TRPT1Q86TN4 253 aaKnown RBP11.42□□□□□ -0.58
TMEM38A-201ENST00000187762 PSMG3-AS1Q96PY0 264 aa11.42□□□□□ -0.58
TMEM38A-201ENST00000187762 ARHGAP32A7KAX9 2087 aa11.42□□□□□ -0.58
TMEM38A-201ENST00000187762 PTPRZ1P23471 2315 aaPredicted RBP11.42□□□□□ -0.58
TMEM38A-201ENST00000187762 IGKV1-17P01599 117 aa11.42□□□□□ -0.58
TMEM38A-201ENST00000187762 NRACQ8N912 160 aa11.42□□□□□ -0.58
TMEM38A-201ENST00000187762 Q8TAT8 98 aa11.42□□□□□ -0.58
TMEM38A-201ENST00000187762 TLN1Q9Y490 2541 aaKnown RBP11.41□□□□□ -0.58
TMEM38A-201ENST00000187762 CRYGBP07316 175 aa11.41□□□□□ -0.58
TMEM38A-201ENST00000187762 IGFBPL1Q8WX77 278 aa11.41□□□□□ -0.58
TMEM38A-201ENST00000187762 SIGLEC9Q9Y336 463 aa11.41□□□□□ -0.58
TMEM38A-201ENST00000187762 CEP295Q9C0D2 2601 aa11.41□□□□□ -0.58
TMEM38A-201ENST00000187762 MUC6Q6W4X9 2439 aa11.41□□□□□ -0.58
TMEM38A-201ENST00000187762 IGHV1-3A0A0C4DH29 117 aa11.41□□□□□ -0.58
TMEM38A-201ENST00000187762 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.41□□□□□ -0.58
TMEM38A-201ENST00000187762 IGLV1-47P01700 117 aa11.41□□□□□ -0.58
TMEM38A-201ENST00000187762 NEXN-AS1Q8NBZ9 246 aa11.41□□□□□ -0.58
TMEM38A-201ENST00000187762 CHCHD5Q9BSY4 110 aa11.41□□□□□ -0.58
TMEM38A-201ENST00000187762 KLHL30-AS1Q8NEE0 82 aa11.4□□□□□ -0.58
TMEM38A-201ENST00000187762 LINC01560Q8TB33 94 aa11.4□□□□□ -0.58
TMEM38A-201ENST00000187762 C21orf62Q9NYP8 219 aa11.4□□□□□ -0.58
TMEM38A-201ENST00000187762 PRO1854Q9UHT4 67 aa11.4□□□□□ -0.58
TMEM38A-201ENST00000187762 TRAV26-2A0A0B4J265 109 aa11.4□□□□□ -0.58
TMEM38A-201ENST00000187762 TRAV2A0A0B4J234 112 aa11.39□□□□□ -0.59
TMEM38A-201ENST00000187762 A0A0J9YY99 117 aa11.39□□□□□ -0.59
TMEM38A-201ENST00000187762 TEX22C9J3V5 150 aa11.39□□□□□ -0.59
TMEM38A-201ENST00000187762 TRGV3P03979 118 aa11.39□□□□□ -0.59
TMEM38A-201ENST00000187762 HLA-DMBP28068 263 aa11.39□□□□□ -0.59
TMEM38A-201ENST00000187762 SRSF2Q01130 221 aaKnown RBP11.39□□□□□ -0.59
TMEM38A-201ENST00000187762 DNAJC30Q96LL9 226 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms