RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 U3KQK5 164 aa10.06□□□□□ -0.8
CTNS-201ENST00000046640 ANKRD17O75179 2603 aaKnown RBP10.06□□□□□ -0.8
CTNS-201ENST00000046640 PF4V1P10720 104 aa10.05□□□□□ -0.8
CTNS-201ENST00000046640 ARL3P36405 182 aa10.05□□□□□ -0.8
CTNS-201ENST00000046640 TMEM95Q3KNT9 176 aa10.05□□□□□ -0.8
CTNS-201ENST00000046640 MAP1LC3AQ9H492 121 aa10.05□□□□□ -0.8
CTNS-201ENST00000046640 HIF1ANQ9NWT6 349 aa10.05□□□□□ -0.8
CTNS-201ENST00000046640 FBN2P35556 2912 aa10.05□□□□□ -0.8
CTNS-201ENST00000046640 TRBV7-1A0A0A6YYK4 115 aa10.05□□□□□ -0.8
CTNS-201ENST00000046640 TRAV8-2A0A0B4J237 113 aa10.05□□□□□ -0.8
CTNS-201ENST00000046640 IGF1P05019 195 aa10.05□□□□□ -0.8
CTNS-201ENST00000046640 BMI1P35226 326 aa10.05□□□□□ -0.8
CTNS-201ENST00000046640 UFSP1Q6NVU6 142 aa10.05□□□□□ -0.8
CTNS-201ENST00000046640 RNF185Q96GF1 192 aa10.05□□□□□ -0.8
CTNS-201ENST00000046640 USP24Q9UPU5 2620 aa10.05□□□□□ -0.8
CTNS-201ENST00000046640 TNFRSF6BO95407 300 aa10.04□□□□□ -0.8
CTNS-201ENST00000046640 TMEM158Q8WZ71 300 aa10.04□□□□□ -0.8
CTNS-201ENST00000046640 C16orf92Q96LL3 132 aa10.04□□□□□ -0.8
CTNS-201ENST00000046640 TMEM160Q9NX00 188 aa10.04□□□□□ -0.8
CTNS-201ENST00000046640 FABP5P3A8MUU1 101 aa10.04□□□□□ -0.8
CTNS-201ENST00000046640 SRD5A1P18405 259 aa10.04□□□□□ -0.8
CTNS-201ENST00000046640 ADAMTSL5Q6ZMM2 481 aa10.04□□□□□ -0.8
CTNS-201ENST00000046640 GTF2H5Q6ZYL4 71 aa10.04□□□□□ -0.8
CTNS-201ENST00000046640 OR2K2Q8NGT1 345 aa10.04□□□□□ -0.8
CTNS-201ENST00000046640 C11orf21Q9P2W6 132 aa10.04□□□□□ -0.8
CTNS-201ENST00000046640 AGRNO00468 2067 aa10.04□□□□□ -0.8
CTNS-201ENST00000046640 G3V4G9 280 aa10.04□□□□□ -0.8
CTNS-201ENST00000046640 H3BRM9 83 aa10.04□□□□□ -0.8
CTNS-201ENST00000046640 HSD52Q0P140 79 aa10.04□□□□□ -0.8
CTNS-201ENST00000046640 DEFB104AQ8WTQ1 72 aa10.04□□□□□ -0.8
CTNS-201ENST00000046640 CREBBPQ92793 2442 aa10.04□□□□□ -0.8
CTNS-201ENST00000046640 FXYD2P54710 66 aa10.03□□□□□ -0.8
CTNS-201ENST00000046640 OR1N2Q8NGR9 330 aa10.03□□□□□ -0.8
CTNS-201ENST00000046640 SPCS1Q9Y6A9 102 aa10.03□□□□□ -0.8
CTNS-201ENST00000046640 EPG5Q9HCE0 2579 aa10.03□□□□□ -0.8
CTNS-201ENST00000046640 TLN2Q9Y4G6 2542 aa10.03□□□□□ -0.8
CTNS-201ENST00000046640 IGLC6P0CF74 106 aa10.03□□□□□ -0.8
CTNS-201ENST00000046640 GLMPQ8WWB7 406 aa10.03□□□□□ -0.8
CTNS-201ENST00000046640 MSMBP08118 114 aa10.02□□□□□ -0.8
CTNS-201ENST00000046640 EDN2P20800 178 aa10.02□□□□□ -0.8
CTNS-201ENST00000046640 TMEM78Q5T7P6 136 aa10.02□□□□□ -0.8
CTNS-201ENST00000046640 IGKV3D-20A0A0C4DH25 116 aa10.02□□□□□ -0.81
CTNS-201ENST00000046640 C20orf173Q96LM9 149 aa10.02□□□□□ -0.81
CTNS-201ENST00000046640 F6UB75 175 aa10.01□□□□□ -0.81
CTNS-201ENST00000046640 FCER1GP30273 86 aa10.01□□□□□ -0.81
CTNS-201ENST00000046640 ZC2HC1BQ5TFG8 222 aa10.01□□□□□ -0.81
CTNS-201ENST00000046640 CUBNO60494 3623 aa10.01□□□□□ -0.81
CTNS-201ENST00000046640 TMEM8BA6NDV4 472 aa10.01□□□□□ -0.81
CTNS-201ENST00000046640 CIDEAO60543 219 aa10.01□□□□□ -0.81
CTNS-201ENST00000046640 RPL24P83731 157 aaKnown RBP10.01□□□□□ -0.81
CTNS-201ENST00000046640 OR9G4Q8NGQ1 327 aa10.01□□□□□ -0.81
CTNS-201ENST00000046640 SLC50A1Q9BRV3 221 aa10.01□□□□□ -0.81
CTNS-201ENST00000046640 SORL1Q92673 2214 aa10.01□□□□□ -0.81
CTNS-201ENST00000046640 K7EP34 96 aa10□□□□□ -0.81
CTNS-201ENST00000046640 RAB9AP51151 201 aa10□□□□□ -0.81
CTNS-201ENST00000046640 ODF1Q14990 250 aa10□□□□□ -0.81
CTNS-201ENST00000046640 C10orf99Q6UWK7 81 aa10□□□□□ -0.81
CTNS-201ENST00000046640 WFDC12Q8WWY7 111 aa10□□□□□ -0.81
CTNS-201ENST00000046640 NHP2Q9NX24 153 aaKnown RBP10□□□□□ -0.81
CTNS-201ENST00000046640 CHTOPQ9Y3Y2 248 aaKnown RBP10□□□□□ -0.81
CTNS-201ENST00000046640 OR4X2Q8NGF9 303 aa10□□□□□ -0.81
CTNS-201ENST00000046640 NAV2Q8IVL1 2488 aa10□□□□□ -0.81
CTNS-201ENST00000046640 A0A1W2PPM0 123 aa10□□□□□ -0.81
CTNS-201ENST00000046640 IGKCP01834 107 aa10□□□□□ -0.81
CTNS-201ENST00000046640 PRR9Q5T870 116 aa10□□□□□ -0.81
CTNS-201ENST00000046640 SAMD5Q5TGI4 173 aa10□□□□□ -0.81
CTNS-201ENST00000046640 MXRA5Q9NR99 2828 aa9.99□□□□□ -0.81
CTNS-201ENST00000046640 SMIM13P0DJ93 91 aa9.99□□□□□ -0.81
CTNS-201ENST00000046640 SMIM17P0DL12 118 aa9.99□□□□□ -0.81
CTNS-201ENST00000046640 C19orf54Q5BKX5 351 aa9.99□□□□□ -0.81
CTNS-201ENST00000046640 COX8CQ7Z4L0 72 aa9.99□□□□□ -0.81
CTNS-201ENST00000046640 MTURNQ8N3F0 131 aa9.99□□□□□ -0.81
CTNS-201ENST00000046640 CHAC1Q9BUX1 264 aa9.99□□□□□ -0.81
CTNS-201ENST00000046640 MRPL35Q9NZE8 188 aaKnown RBP9.99□□□□□ -0.81
CTNS-201ENST00000046640 HHLA3Q9XRX5 114 aa9.99□□□□□ -0.81
CTNS-201ENST00000046640 FAM223BA6NKX1 122 aa9.98□□□□□ -0.81
CTNS-201ENST00000046640 FABP2P12104 132 aa9.98□□□□□ -0.81
CTNS-201ENST00000046640 SPANXN1Q5VSR9 72 aa9.98□□□□□ -0.81
CTNS-201ENST00000046640 NEGR1Q7Z3B1 354 aa9.98□□□□□ -0.81
CTNS-201ENST00000046640 FAM223AQ8IWN6 122 aa9.98□□□□□ -0.81
CTNS-201ENST00000046640 DPF1Q92782 380 aa9.98□□□□□ -0.81
CTNS-201ENST00000046640 A6NDX4 124 aa9.98□□□□□ -0.81
CTNS-201ENST00000046640 IGHV4-59P01825 116 aa9.98□□□□□ -0.81
CTNS-201ENST00000046640 U3KQE9 123 aa9.98□□□□□ -0.81
CTNS-201ENST00000046640 H3BVH4 76 aa9.97□□□□□ -0.81
CTNS-201ENST00000046640 GPHB5Q86YW7 130 aa9.97□□□□□ -0.81
CTNS-201ENST00000046640 MAPKAPK5-AS1Q8N8E1 139 aa9.97□□□□□ -0.81
CTNS-201ENST00000046640 TRBV25-1A0A075B6N4 114 aa9.97□□□□□ -0.81
CTNS-201ENST00000046640 IGHG2P01859 326 aa9.97□□□□□ -0.81
CTNS-201ENST00000046640 TMEM190Q8WZ59 177 aa9.97□□□□□ -0.81
CTNS-201ENST00000046640 TEX15Q9BXT5 2789 aa9.97□□□□□ -0.81
CTNS-201ENST00000046640 NDUFS8O00217 210 aa9.96□□□□□ -0.81
CTNS-201ENST00000046640 KLK9Q2XQG4 91 aa9.96□□□□□ -0.81
CTNS-201ENST00000046640 LINC01559Q495D7 138 aa9.96□□□□□ -0.81
CTNS-201ENST00000046640 NPFFR1Q9GZQ6 430 aa9.96□□□□□ -0.81
CTNS-201ENST00000046640 NXT2Q9NPJ8 142 aaKnown RBP9.96□□□□□ -0.81
CTNS-201ENST00000046640 KLK9Q9UKQ9 250 aa9.96□□□□□ -0.81
CTNS-201ENST00000046640 B4DSR2 109 aa9.96□□□□□ -0.81
CTNS-201ENST00000046640 M0R381 172 aa9.96□□□□□ -0.81
CTNS-201ENST00000046640 DPM2O94777 84 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms