RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Nrn1Q8CFV4 142 aa13.49□□□□□ -0.25
Trim28-201ENSMUST00000005705 Olfr368Q8VF22 327 aa13.49□□□□□ -0.25
Trim28-201ENSMUST00000005705 Olfr1453Q8VFX0 307 aa13.49□□□□□ -0.25
Trim28-201ENSMUST00000005705 Olfr1448Q8VFX1 314 aa13.49□□□□□ -0.25
Trim28-201ENSMUST00000005705 Olfr1118A0A0J9YUE7 307 aa13.49□□□□□ -0.25
Trim28-201ENSMUST00000005705 Casp16-psI6L890 176 aa13.49□□□□□ -0.25
Trim28-201ENSMUST00000005705 P01659 112 aa13.49□□□□□ -0.25
Trim28-201ENSMUST00000005705 Gpm6bP35803 328 aa13.49□□□□□ -0.25
Trim28-201ENSMUST00000005705 Tcl1b2P56841 117 aa13.49□□□□□ -0.25
Trim28-201ENSMUST00000005705 Bricd5Q8BV89 174 aa13.49□□□□□ -0.25
Trim28-201ENSMUST00000005705 Vmn1r70Q8R254 298 aa13.49□□□□□ -0.25
Trim28-201ENSMUST00000005705 Ms4a6cQ99N08 217 aa13.49□□□□□ -0.25
Trim28-201ENSMUST00000005705 Anapc16Q9CPV2 110 aa13.49□□□□□ -0.25
Trim28-201ENSMUST00000005705 Nudt3Q9JI46 168 aa13.49□□□□□ -0.25
Trim28-201ENSMUST00000005705 Gm21789J3QMZ1 123 aa13.48□□□□□ -0.25
Trim28-201ENSMUST00000005705 Gm21870J3QPN2 123 aa13.48□□□□□ -0.25
Trim28-201ENSMUST00000005705 Gm21883J3QPV3 123 aa13.48□□□□□ -0.25
Trim28-201ENSMUST00000005705 Gm21310J3QQ23 232 aa13.48□□□□□ -0.25
Trim28-201ENSMUST00000005705 GfralQ6SJE0 393 aa13.48□□□□□ -0.25
Trim28-201ENSMUST00000005705 LenepQ9WVB6 61 aa13.48□□□□□ -0.25
Trim28-201ENSMUST00000005705 Gpr132Q9Z282 382 aa13.48□□□□□ -0.25
Trim28-201ENSMUST00000005705 Syngr2O55101 224 aa13.48□□□□□ -0.25
Trim28-201ENSMUST00000005705 Fgf5P15656 264 aa13.48□□□□□ -0.25
Trim28-201ENSMUST00000005705 Wfdc8Q4KUS1 273 aa13.48□□□□□ -0.25
Trim28-201ENSMUST00000005705 Ndufv3Q8BK30 104 aaKnown RBP13.48□□□□□ -0.25
Trim28-201ENSMUST00000005705 Oraov1Q8CH62 137 aa13.48□□□□□ -0.25
Trim28-201ENSMUST00000005705 Olfr484Q8VFD3 321 aa13.48□□□□□ -0.25
Trim28-201ENSMUST00000005705 Fgfrl1Q91V87 529 aa13.48□□□□□ -0.25
Trim28-201ENSMUST00000005705 Tex43Q9D9I1 141 aa13.48□□□□□ -0.25
Trim28-201ENSMUST00000005705 Cldn34c4A2ANA3 212 aa13.47□□□□□ -0.25
Trim28-201ENSMUST00000005705 Prss32E9Q409 334 aa13.47□□□□□ -0.25
Trim28-201ENSMUST00000005705 Olfr251E9Q891 316 aa13.47□□□□□ -0.25
Trim28-201ENSMUST00000005705 3110021N24RikJ3QMN2 152 aa13.47□□□□□ -0.25
Trim28-201ENSMUST00000005705 Pld4Q8BG07 503 aa13.47□□□□□ -0.25
Trim28-201ENSMUST00000005705 Olfr346Q8VGJ7 309 aa13.47□□□□□ -0.25
Trim28-201ENSMUST00000005705 PpbpQ9EQI5 113 aa13.47□□□□□ -0.25
Trim28-201ENSMUST00000005705 Spg11Q3UHA3 2430 aa13.47□□□□□ -0.25
Trim28-201ENSMUST00000005705 Ep300B2RWS6 2412 aa13.47□□□□□ -0.25
Trim28-201ENSMUST00000005705 Ighv5-4A0A075B5P9 117 aa13.47□□□□□ -0.25
Trim28-201ENSMUST00000005705 Bcl2P10417 236 aa13.47□□□□□ -0.25
Trim28-201ENSMUST00000005705 ApohQ01339 345 aa13.47□□□□□ -0.25
Trim28-201ENSMUST00000005705 Olfr1472Q7TQQ9 314 aa13.47□□□□□ -0.25
Trim28-201ENSMUST00000005705 Gpbar1Q80SS6 329 aa13.47□□□□□ -0.25
Trim28-201ENSMUST00000005705 Olfr972Q9EQA2 314 aa13.47□□□□□ -0.25
Trim28-201ENSMUST00000005705 Olfr19Q9JHB2 309 aa13.47□□□□□ -0.25
Trim28-201ENSMUST00000005705 Ifna4P07351 186 aa13.47□□□□□ -0.25
Trim28-201ENSMUST00000005705 G6pcP35576 357 aa13.47□□□□□ -0.25
Trim28-201ENSMUST00000005705 Gm16686Q3UMN9 131 aa13.47□□□□□ -0.25
Trim28-201ENSMUST00000005705 Olfr924Q7TRB8 308 aa13.47□□□□□ -0.25
Trim28-201ENSMUST00000005705 Hapln4Q80WM4 400 aa13.47□□□□□ -0.25
Trim28-201ENSMUST00000005705 Olfr1457Q8VFK3 317 aa13.47□□□□□ -0.25
Trim28-201ENSMUST00000005705 Rnps1Q99M28 305 aaKnown RBP13.47□□□□□ -0.25
Trim28-201ENSMUST00000005705 Ifitm7G3X9Z2 141 aa13.46□□□□□ -0.25
Trim28-201ENSMUST00000005705 Hspb7P35385 169 aa13.46□□□□□ -0.25
Trim28-201ENSMUST00000005705 Sfrp2P97299 295 aa13.46□□□□□ -0.25
Trim28-201ENSMUST00000005705 Olfr1408Q8VG32 310 aa13.46□□□□□ -0.25
Trim28-201ENSMUST00000005705 Fam103a1Q9CQY2 119 aaKnown RBP13.46□□□□□ -0.25
Trim28-201ENSMUST00000005705 Ppp1r27Q9D119 154 aa13.46□□□□□ -0.25
Trim28-201ENSMUST00000005705 Olfr1406E9Q8X1 310 aa13.46□□□□□ -0.26
Trim28-201ENSMUST00000005705 Mpc1P63030 109 aa13.46□□□□□ -0.26
Trim28-201ENSMUST00000005705 UngP97931 306 aa13.46□□□□□ -0.26
Trim28-201ENSMUST00000005705 Q8VC23 124 aa13.46□□□□□ -0.26
Trim28-201ENSMUST00000005705 Fam208bQ5DTT3 2382 aa13.45□□□□□ -0.26
Trim28-201ENSMUST00000005705 Tnfsf11O35235 316 aa13.45□□□□□ -0.26
Trim28-201ENSMUST00000005705 Rab7aP51150 207 aaKnown RBP13.45□□□□□ -0.26
Trim28-201ENSMUST00000005705 Tas2r41P59532 308 aa13.45□□□□□ -0.26
Trim28-201ENSMUST00000005705 F7P70375 446 aa13.45□□□□□ -0.26
Trim28-201ENSMUST00000005705 CxadrP97792 365 aa13.45□□□□□ -0.26
Trim28-201ENSMUST00000005705 Smim9Q3V0X1 137 aa13.45□□□□□ -0.26
Trim28-201ENSMUST00000005705 Prss44Q402U7 372 aa13.45□□□□□ -0.26
Trim28-201ENSMUST00000005705 Znrf2Q71FD5 238 aa13.45□□□□□ -0.26
Trim28-201ENSMUST00000005705 Btf3l4Q9CQH7 158 aaKnown RBP13.45□□□□□ -0.26
Trim28-201ENSMUST00000005705 Gar1Q9CY66 231 aaKnown RBP13.45□□□□□ -0.26
Trim28-201ENSMUST00000005705 Pip4p2Q9CZX7 257 aa13.45□□□□□ -0.26
Trim28-201ENSMUST00000005705 Hdgfl3Q9JMG7 202 aa13.45□□□□□ -0.26
Trim28-201ENSMUST00000005705 Olfr1116E9PXB8 307 aa13.45□□□□□ -0.26
Trim28-201ENSMUST00000005705 Cldn34c3J3QJW5 233 aa13.45□□□□□ -0.26
Trim28-201ENSMUST00000005705 Cldn34c2J3QNM1 233 aa13.45□□□□□ -0.26
Trim28-201ENSMUST00000005705 Cypt1Q8CH20 168 aa13.45□□□□□ -0.26
Trim28-201ENSMUST00000005705 Cldn34c1Q8K193 234 aa13.45□□□□□ -0.26
Trim28-201ENSMUST00000005705 Atp6v1fQ9D1K2 119 aa13.45□□□□□ -0.26
Trim28-201ENSMUST00000005705 VsirQ9D659 308 aa13.45□□□□□ -0.26
Trim28-201ENSMUST00000005705 Try5Q9QUK9 246 aa13.45□□□□□ -0.26
Trim28-201ENSMUST00000005705 Try4Q9R0T7 246 aa13.45□□□□□ -0.26
Trim28-201ENSMUST00000005705 Ighv7-2A0A0A6YX91 119 aa13.45□□□□□ -0.26
Trim28-201ENSMUST00000005705 Gm20773A0A0A6YXW2 232 aa13.45□□□□□ -0.26
Trim28-201ENSMUST00000005705 Gm20807A0A0A6YXX7 232 aa13.45□□□□□ -0.26
Trim28-201ENSMUST00000005705 Gm5129F6YHA9 99 aa13.45□□□□□ -0.26
Trim28-201ENSMUST00000005705 Gm20873J3QMQ9 232 aa13.45□□□□□ -0.26
Trim28-201ENSMUST00000005705 Gm20795J3QP49 232 aa13.45□□□□□ -0.26
Trim28-201ENSMUST00000005705 Olfr467L7N455 308 aa13.45□□□□□ -0.26
Trim28-201ENSMUST00000005705 Ifna6P07350 189 aa13.45□□□□□ -0.26
Trim28-201ENSMUST00000005705 Olfr15P23275 312 aa13.45□□□□□ -0.26
Trim28-201ENSMUST00000005705 Gpr12P35412 334 aa13.45□□□□□ -0.26
Trim28-201ENSMUST00000005705 Gm21440Q3TTD8 232 aa13.45□□□□□ -0.26
Trim28-201ENSMUST00000005705 Cd96Q3U0X8 602 aa13.45□□□□□ -0.26
Trim28-201ENSMUST00000005705 Commd9Q8K2Q0 198 aa13.45□□□□□ -0.26
Trim28-201ENSMUST00000005705 Olfr1228Q8VGM9 323 aa13.45□□□□□ -0.26
Trim28-201ENSMUST00000005705 Scp2d1Q9DAH1 156 aa13.45□□□□□ -0.26
Trim28-201ENSMUST00000005705 Susd2Q9DBX3 820 aa13.45□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 34.6 ms